Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30185
(783 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q1HPI3 Cluster: C14orf124 protein; n=4; Endopterygota|R... 112 1e-23
UniRef50_Q08C46 Cluster: Zgc:153633; n=8; Euteleostomi|Rep: Zgc:... 48 4e-04
UniRef50_A7RRE4 Cluster: Predicted protein; n=1; Nematostella ve... 43 0.008
UniRef50_UPI00005851EB Cluster: PREDICTED: hypothetical protein,... 39 0.16
UniRef50_A5L319 Cluster: Putative uncharacterized protein; n=1; ... 37 0.50
UniRef50_Q1DU42 Cluster: Predicted protein; n=1; Coccidioides im... 37 0.65
UniRef50_Q9ABL7 Cluster: TonB-dependent receptor; n=1; Caulobact... 36 1.1
UniRef50_UPI00015A4B20 Cluster: UPI00015A4B20 related cluster; n... 36 1.5
UniRef50_Q9NRG7 Cluster: UPF0105 protein C14orf124; n=22; Deuter... 36 1.5
UniRef50_Q15572 Cluster: TATA box-binding protein-associated fac... 35 2.6
UniRef50_Q62A39 Cluster: Rhs element Vgr protein; n=15; Burkhold... 34 3.5
UniRef50_P13983 Cluster: Extensin precursor; n=1; Nicotiana taba... 34 3.5
UniRef50_A0L8N8 Cluster: Putative uncharacterized protein; n=1; ... 33 6.1
UniRef50_Q67Q27 Cluster: Isoleucyl-tRNA synthetase; n=6; Bacteri... 33 6.1
UniRef50_Q67RC7 Cluster: UDP-glucose 4-epimerase; n=1; Symbiobac... 33 8.1
UniRef50_O61585 Cluster: Katanin p80 WD40-containing subunit B1;... 33 8.1
UniRef50_Q99665 Cluster: Interleukin-12 receptor beta-2 chain pr... 33 8.1
>UniRef50_Q1HPI3 Cluster: C14orf124 protein; n=4; Endopterygota|Rep:
C14orf124 protein - Bombyx mori (Silk moth)
Length = 303
Score = 112 bits (269), Expect = 1e-23
Identities = 52/54 (96%), Positives = 53/54 (98%)
Frame = +2
Query: 251 FFGKHLGELLSSKGYDIMNVARMPASKNISWSTIEASGLPKNTSAVVNCAGQQF 412
F GKHLGELLSSKGYDIMNVARMPASKNISWSTIEASGLPK+TSAVVNCAGQQF
Sbjct: 14 FIGKHLGELLSSKGYDIMNVARMPASKNISWSTIEASGLPKDTSAVVNCAGQQF 67
Score = 47.2 bits (107), Expect = 5e-04
Identities = 38/78 (48%), Positives = 40/78 (51%)
Frame = +1
Query: 475 YEPSNVN*YG*GSPTTGGRFSSSTGLSCLNGGKSWLPGRFPPVGTL*SFRSGARSRVDGG 654
YEPSNVN Y SPTTG F S + + PPV L RSGA G
Sbjct: 116 YEPSNVNKYDESSPTTGTDFFSRLVVEWEKAAQV-----DPPV-RLVIIRSGA-VLGRWG 168
Query: 655 GMIKNHGFYPFFLGFRGP 708
GMIKN F PFFLGF GP
Sbjct: 169 GMIKNM-FLPFFLGFGGP 185
>UniRef50_Q08C46 Cluster: Zgc:153633; n=8; Euteleostomi|Rep:
Zgc:153633 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 301
Score = 47.6 bits (108), Expect = 4e-04
Identities = 23/52 (44%), Positives = 32/52 (61%)
Frame = +2
Query: 251 FFGKHLGELLSSKGYDIMNVARMPASKNISWSTIEASGLPKNTSAVVNCAGQ 406
F G+ L LL SKG++I ++R P I+WS +E+ GLP A VN AG+
Sbjct: 11 FVGRELTRLLKSKGHEITLISRQPGPGKITWSDVESRGLPPCEGA-VNLAGE 61
>UniRef50_A7RRE4 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 327
Score = 43.2 bits (97), Expect = 0.008
Identities = 22/52 (42%), Positives = 31/52 (59%)
Frame = +2
Query: 251 FFGKHLGELLSSKGYDIMNVARMPASKNISWSTIEASGLPKNTSAVVNCAGQ 406
F G++L L KG+DI+ ++R I+W I SGLP+ AVVN AG+
Sbjct: 44 FVGRNLTAALKFKGHDIVIISRTAGPGKITWDQITKSGLPQ-CQAVVNLAGE 94
>UniRef50_UPI00005851EB Cluster: PREDICTED: hypothetical protein,
partial; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: hypothetical protein, partial -
Strongylocentrotus purpuratus
Length = 109
Score = 38.7 bits (86), Expect = 0.16
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = +2
Query: 251 FFGKHLGELLSSKGYDIMNVARMPASKNISWSTIEASGLPKNTSAVVNCAGQ 406
F G L + L KG+ + V+R P ++W ++ +GLP+ AVVN G+
Sbjct: 11 FIGTALRKQLEVKGHKALLVSRSPGKDRVTWDEVKKNGLPQ-CDAVVNLTGE 61
>UniRef50_A5L319 Cluster: Putative uncharacterized protein; n=1;
Vibrionales bacterium SWAT-3|Rep: Putative
uncharacterized protein - Vibrionales bacterium SWAT-3
Length = 394
Score = 37.1 bits (82), Expect = 0.50
Identities = 20/43 (46%), Positives = 24/43 (55%)
Frame = +1
Query: 97 IIGNLLTYYI*LNLKAIKTPVFFVRASVLSLTRYYCVLPLLST 225
+IGNLLTY LNL +K P+F R S L R LL+T
Sbjct: 118 VIGNLLTYNAILNLTGLKAPLFSSRVSASDLKRNSVFRQLLAT 160
>UniRef50_Q1DU42 Cluster: Predicted protein; n=1; Coccidioides
immitis|Rep: Predicted protein - Coccidioides immitis
Length = 214
Score = 36.7 bits (81), Expect = 0.65
Identities = 17/27 (62%), Positives = 18/27 (66%)
Frame = -2
Query: 446 GKKKGVFPPPNGIVVQHN*QRPKYFLV 366
GK+KG FPPP GI H PKYFLV
Sbjct: 75 GKEKGSFPPPRGIRSSHQ-SDPKYFLV 100
>UniRef50_Q9ABL7 Cluster: TonB-dependent receptor; n=1; Caulobacter
vibrioides|Rep: TonB-dependent receptor - Caulobacter
crescentus (Caulobacter vibrioides)
Length = 843
Score = 35.9 bits (79), Expect = 1.1
Identities = 17/72 (23%), Positives = 31/72 (43%)
Frame = +2
Query: 173 QVSYH*QDIIVFYLYYQHTETMWRHRFFGKHLGELLSSKGYDIMNVARMPASKNISWSTI 352
Q+ Y + + FY + + +T + G LG +L +KG ++ + ++W
Sbjct: 693 QLGYKPEQYLSFYASFSYIDTELKANIPGTTLGSVLPTKGKEVYETPKYQGGVGVNWDIT 752
Query: 353 EASGLPKNTSAV 388
EA L N V
Sbjct: 753 EALSLGVNAKIV 764
>UniRef50_UPI00015A4B20 Cluster: UPI00015A4B20 related cluster; n=2;
Danio rerio|Rep: UPI00015A4B20 UniRef100 entry - Danio
rerio
Length = 554
Score = 35.5 bits (78), Expect = 1.5
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Frame = +2
Query: 224 HTETMWRHRFFGKHLGELLSSKGYD----IMNVARMPASKNISWSTIEASGLPKNTSAVV 391
H+ WRH+ G+L GY+ + V R +N SW ++ LP +++A+
Sbjct: 355 HSRGRWRHKMVSL-CGKLYVVGGYNGRERVSTVERYSPHEN-SWISVSELPLPVSSAALA 412
Query: 392 NCAGQQFHLGG 424
+C G+ + +GG
Sbjct: 413 SCCGKLYVIGG 423
>UniRef50_Q9NRG7 Cluster: UPF0105 protein C14orf124; n=22;
Deuterostomia|Rep: UPF0105 protein C14orf124 - Homo
sapiens (Human)
Length = 319
Score = 35.5 bits (78), Expect = 1.5
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +2
Query: 239 WRHRFFGKHLGELLSSKGYDIMNVARMPASKNISWSTIEASGLPKNTSAVVNCAGQ 406
WR R + +++ V+R P I+W + ASGLP + A VN AG+
Sbjct: 33 WRDRLHWDSPNPAAECQRHEVTLVSRKPGPGRITWDELAASGLP-SCDAAVNLAGE 87
>UniRef50_Q15572 Cluster: TATA box-binding protein-associated factor
RNA polymerase I subunit C; n=18; Eutheria|Rep: TATA
box-binding protein-associated factor RNA polymerase I
subunit C - Homo sapiens (Human)
Length = 869
Score = 34.7 bits (76), Expect = 2.6
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = +1
Query: 553 SCLNGGKSWLPGRFPPVGTL*SFRSGARSRVDGGGMIKNHGFYPFFLGFRG 705
+C G +W+PGR P G L GA+ R+ ++ G P FLG G
Sbjct: 210 ACTGGALAWVPGRTPQFGQLVYPAGGAQDRLHFQEVVLTPGDNPQFLGKPG 260
>UniRef50_Q62A39 Cluster: Rhs element Vgr protein; n=15;
Burkholderia|Rep: Rhs element Vgr protein - Burkholderia
mallei (Pseudomonas mallei)
Length = 775
Score = 34.3 bits (75), Expect = 3.5
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -3
Query: 709 GAPGTPKKRGKNHGSLSSPPH-LP*NGLQNGMITKSPLGG 593
G P P G+ + +L PP LP N Q+G +T+SP GG
Sbjct: 472 GDPDRPLVTGQVYNALHMPPWPLPENATQSGFMTRSPAGG 511
>UniRef50_P13983 Cluster: Extensin precursor; n=1; Nicotiana
tabacum|Rep: Extensin precursor - Nicotiana tabacum
(Common tobacco)
Length = 620
Score = 34.3 bits (75), Expect = 3.5
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -2
Query: 656 PPPSTLERAPERNDHKVPTG-GNLPGSQLFPPFKQLRPVEEENLPPVVGLPHPY 498
PPPS++ +P P G++P + PP P +LPP VG P P+
Sbjct: 42 PPPSSIGLSPPSAPTTTPPSRGHVPSPRHAPPRHAYPPPSHGHLPPSVGGPPPH 95
>UniRef50_A0L8N8 Cluster: Putative uncharacterized protein; n=1;
Magnetococcus sp. MC-1|Rep: Putative uncharacterized
protein - Magnetococcus sp. (strain MC-1)
Length = 446
Score = 33.5 bits (73), Expect = 6.1
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = -2
Query: 596 GNLPGSQL-FPPFKQLRPVEEENLPPVVGLP 507
G PG Q+ +PP RP+EE+ PP+V LP
Sbjct: 142 GITPGDQIQYPPLWSARPIEEQVEPPLVKLP 172
>UniRef50_Q67Q27 Cluster: Isoleucyl-tRNA synthetase; n=6;
Bacteria|Rep: Isoleucyl-tRNA synthetase -
Symbiobacterium thermophilum
Length = 938
Score = 33.5 bits (73), Expect = 6.1
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +1
Query: 247 PVFWKTFRRTAFIK-RI*YNERSSYASLEKYILVNNRGLRLTKKYFGRCQLCWTTIPF 417
PV+W + TA + I YNE++SY+ ++ +V+ RG K G + WTT P+
Sbjct: 187 PVYWCPYCETALAEAEIEYNEKTSYSIYVRFPVVDPRG----KLPEGSYLVIWTTTPW 240
>UniRef50_Q67RC7 Cluster: UDP-glucose 4-epimerase; n=1;
Symbiobacterium thermophilum|Rep: UDP-glucose
4-epimerase - Symbiobacterium thermophilum
Length = 292
Score = 33.1 bits (72), Expect = 8.1
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +2
Query: 251 FFGKHLGELLSSKGYDIMNVARMPASKNI-SWSTIEASGLPKNTSAVVNCAGQ 406
F G HL E L + G+D++ V R P + + T++ + L VV+ AGQ
Sbjct: 12 FIGSHLVEALRAAGHDVVGVDRRPGADVVGDLLTLDLAPLLDGVEYVVHLAGQ 64
>UniRef50_O61585 Cluster: Katanin p80 WD40-containing subunit B1;
n=4; Eumetazoa|Rep: Katanin p80 WD40-containing subunit
B1 - Strongylocentrotus purpuratus (Purple sea urchin)
Length = 690
Score = 33.1 bits (72), Expect = 8.1
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = -2
Query: 662 IIPPPSTLERAPERNDHKVPTGGNLPGSQLFPPFKQ-LRPVEEENLPPVVGLPHP 501
I P + ++ +PERN P ++PG+Q PFK +P + PV P P
Sbjct: 387 IFSPKTRVDHSPERNAQPFPAPLDVPGAQEPEPFKHPPKPAAAAAVAPVSRAPAP 441
>UniRef50_Q99665 Cluster: Interleukin-12 receptor beta-2 chain
precursor; n=17; Eutheria|Rep: Interleukin-12 receptor
beta-2 chain precursor - Homo sapiens (Human)
Length = 862
Score = 33.1 bits (72), Expect = 8.1
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = -3
Query: 610 KSPLGGTYLGASFFPHSNNLGPWRKKICPQL*DCLIHINLHWKVHSTNSVP 458
K+PL G ++ A + L W + CL+H ++WK +NS P
Sbjct: 519 KAPLSGPHINAITEEKGSILISWNSIPVQEQMGCLLHYRIYWKERDSNSQP 569
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 929,095,602
Number of Sequences: 1657284
Number of extensions: 23732204
Number of successful extensions: 54070
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 50810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 53974
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 66262109095
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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