Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30185
         (783 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    27   0.13 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   1.2  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    23   3.6  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   6.4  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    22   6.4  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 27.5 bits (58), Expect = 0.13
 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
 Frame = +1

Query: 109 LLTYYI*LNLKAIKTPVFFVRASVLSLTRYYC---VLPLLSTY*NNVAAP 249
           L  YY    L  +    +F RA ++  T +YC   + PL ST+  NV  P
Sbjct: 283 LCIYYFYCALIILLCIYYFCRAFIIFPTHFYCAFSLYPLKSTFYLNVVRP 332


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = +3

Query: 156  SFFCKSKCLIIDKILLCFTFIIN 224
            +F C ++C    KI +C+  ++N
Sbjct: 1108 TFGCSNRCFFPSKIRICWNVLLN 1130


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
 Frame = +1

Query: 427 KTPFF--LPVRTQVQSWCYEPSNVN*YG 504
           ++P+F  L V+  VQ W  +PS+V  +G
Sbjct: 425 ESPYFEKLDVKVTVQLWLGDPSSVLSHG 452


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -2

Query: 83  VIIF*LIKFHLCFNFYCFNVPLKM 12
           V+I+    F+LCF FY   V + M
Sbjct: 314 VVIYTFNLFYLCFCFYWLLVMVAM 337


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -2

Query: 83  VIIF*LIKFHLCFNFYCFNVPLKM 12
           V+I+    F+LCF FY   V + M
Sbjct: 270 VVIYTFNLFYLCFCFYWLLVMVAM 293


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 222,977
Number of Sequences: 336
Number of extensions: 6067
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21168876
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)