Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30185
(783 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49912-7|CAI70412.1| 554|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z49912-6|CAA90137.1| 615|Caenorhabditis elegans Hypothetical pr... 31 1.2
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 30 2.1
U40410-5|AAA81394.3| 1199|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z81571-11|CAC35914.1| 1579|Caenorhabditis elegans Hypothetical p... 29 5.0
Z81129-3|CAB03404.1| 1262|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical pr... 29 5.0
AL132848-7|CAC35915.1| 1579|Caenorhabditis elegans Hypothetical ... 29 5.0
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 28 6.6
U40938-2|AAQ65206.1| 463|Caenorhabditis elegans Hypothetical pr... 28 6.6
U40938-1|AAA81695.2| 465|Caenorhabditis elegans Hypothetical pr... 28 6.6
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 28 6.6
AC024810-8|AAU20830.1| 1446|Caenorhabditis elegans Hypothetical ... 28 6.6
Z81486-5|CAB03987.1| 570|Caenorhabditis elegans Hypothetical pr... 28 8.7
U39653-2|AAM69064.1| 1092|Caenorhabditis elegans Hypothetical pr... 28 8.7
U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical pr... 28 8.7
>Z49912-7|CAI70412.1| 554|Caenorhabditis elegans Hypothetical
protein T24F1.3b protein.
Length = 554
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +2
Query: 293 YDIMNVARMPASKNISWSTIEASGLPKNTSAVVN 394
YD++N A+ A K S TI + LP+NT+ V+N
Sbjct: 324 YDVVNTAKSTA-KTTSLRTITSFFLPRNTAKVIN 356
>Z49912-6|CAA90137.1| 615|Caenorhabditis elegans Hypothetical
protein T24F1.3a protein.
Length = 615
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +2
Query: 293 YDIMNVARMPASKNISWSTIEASGLPKNTSAVVN 394
YD++N A+ A K S TI + LP+NT+ V+N
Sbjct: 385 YDVVNTAKSTA-KTTSLRTITSFFLPRNTAKVIN 417
>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical
protein F35A5.1 protein.
Length = 1274
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -2
Query: 659 IPPPSTLERAPERNDHKVP-TGGNLPGSQLFPPFKQLRPVEEENLPPV 519
+ PS ++ P + + +VP T P + PP++ PVEE PPV
Sbjct: 251 VSDPSPTKKVPVKKEPEVPPTPIKNPTKKWKPPWEDETPVEEVKEPPV 298
>U40410-5|AAA81394.3| 1199|Caenorhabditis elegans Hypothetical protein
C54G7.4 protein.
Length = 1199
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Frame = -1
Query: 519 CRTASSILIYIGRFIAPTLY-LCPDW*KKRGFSP--PKWNCCP 400
C+T + I GR I ++ LCP K R PK+NCCP
Sbjct: 1147 CQTKFPVCIASGRLILDNIFWLCPRC-KHRAHQHEIPKYNCCP 1188
>Z81571-11|CAC35914.1| 1579|Caenorhabditis elegans Hypothetical
protein M01G12.12 protein.
Length = 1579
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/58 (24%), Positives = 24/58 (41%)
Frame = +2
Query: 293 YDIMNVARMPASKNISWSTIEASGLPKNTSAVVNCAGQQFHLGGEKPLFFYQSGHRYR 466
Y+ R P + +W + K T + N + ++GG P++ Y HR R
Sbjct: 1230 YECAKSTREPRKLSFAWIAYDVIAKIKETKVLENV---EMNIGGANPMYTYLEHHRAR 1284
>Z81129-3|CAB03404.1| 1262|Caenorhabditis elegans Hypothetical
protein T23F1.5 protein.
Length = 1262
Score = 28.7 bits (61), Expect = 5.0
Identities = 20/69 (28%), Positives = 26/69 (37%)
Frame = -2
Query: 665 FIIPPPSTLERAPERNDHKVPTGGNLPGSQLFPPFKQLRPVEEENLPPVVGLPHPY*FTL 486
+I PPP + VP PG Q FPPF + +L P P P F
Sbjct: 547 YIPPPPPPHPEEEYATPYTVP-----PGKQPFPPFGEGPATPPRSLIPAHNFPPPSTFPP 601
Query: 485 EGS*HQLCT 459
+ H+ T
Sbjct: 602 DEDYHETTT 610
>Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/57 (28%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Frame = -1
Query: 390 TTAEVFFGKPEASIVDQDIFFEAGIRATFIISYPFDE--SSSPKCFPKNRCRHIVSV 226
TT + + + +++VD+ + A A I + FD+ SSSP+ FP+++ +++ S+
Sbjct: 2460 TTTDTYSKRSTSTLVDRFGYETATPPAISIAAISFDQPSSSSPQAFPRSKHQNLSSL 2516
>Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/57 (28%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Frame = -1
Query: 390 TTAEVFFGKPEASIVDQDIFFEAGIRATFIISYPFDE--SSSPKCFPKNRCRHIVSV 226
TT + + + +++VD+ + A A I + FD+ SSSP+ FP+++ +++ S+
Sbjct: 2460 TTTDTYSKRSTSTLVDRFGYETATPPAISIAAISFDQPSSSSPQAFPRSKHQNLSSL 2516
>AL132848-7|CAC35915.1| 1579|Caenorhabditis elegans Hypothetical
protein M01G12.12 protein.
Length = 1579
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/58 (24%), Positives = 24/58 (41%)
Frame = +2
Query: 293 YDIMNVARMPASKNISWSTIEASGLPKNTSAVVNCAGQQFHLGGEKPLFFYQSGHRYR 466
Y+ R P + +W + K T + N + ++GG P++ Y HR R
Sbjct: 1230 YECAKSTREPRKLSFAWIAYDVIAKIKETKVLENV---EMNIGGANPMYTYLEHHRAR 1284
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = -1
Query: 363 PEASIVDQDIFFEAGIRATFIISYPFDESSSPKCFPKNRCRHIVSVC 223
PEA VD I +E R ++ D S PK P +CR +++ C
Sbjct: 431 PEARCVDALIGYECLCREGYL-----DTSIDPKARPGRKCRKLINEC 472
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = -1
Query: 363 PEASIVDQDIFFEAGIRATFIISYPFDESSSPKCFPKNRCRHIVSVC 223
PEA VD I +E R ++ D S PK P +CR +++ C
Sbjct: 431 PEARCVDALIGYECLCREGYL-----DTSIDPKARPGRKCRKLINEC 472
>U40938-2|AAQ65206.1| 463|Caenorhabditis elegans Hypothetical
protein D1009.3b protein.
Length = 463
Score = 28.3 bits (60), Expect = 6.6
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -1
Query: 702 PEPQKKGVKTMVLYHPPPIYPRTGSRT 622
PEP + K ++Y+ PP P+T + T
Sbjct: 179 PEPSEIATKKPIIYYSPPTTPKTTTST 205
>U40938-1|AAA81695.2| 465|Caenorhabditis elegans Hypothetical
protein D1009.3a protein.
Length = 465
Score = 28.3 bits (60), Expect = 6.6
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -1
Query: 702 PEPQKKGVKTMVLYHPPPIYPRTGSRT 622
PEP + K ++Y+ PP P+T + T
Sbjct: 181 PEPSEIATKKPIIYYSPPTTPKTTTST 207
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane
cell adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = -1
Query: 363 PEASIVDQDIFFEAGIRATFIISYPFDESSSPKCFPKNRCRHIVSVC 223
PEA VD I +E R ++ D S PK P +CR +++ C
Sbjct: 431 PEARCVDALIGYECLCREGYL-----DTSIDPKARPGRKCRKLINEC 472
>AC024810-8|AAU20830.1| 1446|Caenorhabditis elegans Hypothetical
protein Y54E10A.11 protein.
Length = 1446
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 63 YQLENYDCKKCNNR*FTNLLYLIKS*GNKNTSFFCKS 173
+QL CK+C N+ +N LY N++T C++
Sbjct: 1407 HQLPKIKCKQCKNKFHSNCLYKWFESSNQSTCPLCRN 1443
>Z81486-5|CAB03987.1| 570|Caenorhabditis elegans Hypothetical
protein C53A5.6 protein.
Length = 570
Score = 27.9 bits (59), Expect = 8.7
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +2
Query: 257 GKHLGELLSSKGYD--IMNVARMPASKNISWSTIEASGLPKNTSAVVNCAGQQFHLGG 424
G H ++ + GYD MN + + W + P+ +AVV C G+ + LGG
Sbjct: 374 GIHNNKMYVAGGYDSTYMNSVEVYDTDQGEWKDGPSLQRPRADAAVVPCNGEVYVLGG 431
>U39653-2|AAM69064.1| 1092|Caenorhabditis elegans Hypothetical
protein T13H2.5b protein.
Length = 1092
Score = 27.9 bits (59), Expect = 8.7
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = -1
Query: 615 SQSPHWGEPTWEPAFSPIQTT*ARGGRKSAPSCRTASSILIYIGRFI 475
+Q + + P +PI+TT + G SAP +T S L +G+F+
Sbjct: 418 NQQQLYSDMAQAPQSTPIRTT-PQPGTGSAPQAQTPQSHLAQLGQFV 463
>U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical protein
T13H2.5a protein.
Length = 2471
Score = 27.9 bits (59), Expect = 8.7
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = -1
Query: 615 SQSPHWGEPTWEPAFSPIQTT*ARGGRKSAPSCRTASSILIYIGRFI 475
+Q + + P +PI+TT + G SAP +T S L +G+F+
Sbjct: 1797 NQQQLYSDMAQAPQSTPIRTT-PQPGTGSAPQAQTPQSHLAQLGQFV 1842
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,263,219
Number of Sequences: 27780
Number of extensions: 572868
Number of successful extensions: 1378
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1260
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1375
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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