Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30182
(414 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 23 1.4
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 23 1.4
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 21 7.3
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 20 9.6
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 20 9.6
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 20 9.6
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 20 9.6
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 20 9.6
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 20 9.6
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 20 9.6
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 20 9.6
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 20 9.6
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 20 9.6
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 20 9.6
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 20 9.6
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 20 9.6
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 20 9.6
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 20 9.6
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 20 9.6
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 20 9.6
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 20 9.6
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 20 9.6
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 20 9.6
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 20 9.6
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 20 9.6
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 20 9.6
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 20 9.6
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 20 9.6
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 20 9.6
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 23.0 bits (47), Expect = 1.4
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = -1
Query: 252 RYCRQMAKRIPPKCWSSD 199
RYC +R+ CW+ D
Sbjct: 146 RYCLTPTERLEALCWTQD 163
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 23.0 bits (47), Expect = 1.4
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = -1
Query: 252 RYCRQMAKRIPPKCWSSD 199
RYC +R+ CW+ D
Sbjct: 199 RYCLTPTERLEALCWTQD 216
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 20.6 bits (41), Expect = 7.3
Identities = 5/10 (50%), Positives = 9/10 (90%)
Frame = +2
Query: 377 PIVQKHIYVH 406
P++QKH+ +H
Sbjct: 317 PLIQKHLKIH 326
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 20.2 bits (40), Expect = 9.6
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -3
Query: 100 RRIVSVSRLGSGRAECRN 47
RRI + +LGS R++ R+
Sbjct: 67 RRIREIEKLGSERSKSRS 84
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 20.2 bits (40), Expect = 9.6
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -3
Query: 100 RRIVSVSRLGSGRAECRN 47
RRI + +LGS R++ R+
Sbjct: 67 RRIREIEKLGSERSKSRS 84
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 20.2 bits (40), Expect = 9.6
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -3
Query: 100 RRIVSVSRLGSGRAECRN 47
RRI + +LGS R++ R+
Sbjct: 67 RRIREIEKLGSERSKSRS 84
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 20.2 bits (40), Expect = 9.6
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -3
Query: 100 RRIVSVSRLGSGRAECRN 47
RRI + +LGS R++ R+
Sbjct: 67 RRIREIEKLGSERSKSRS 84
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.2 bits (40), Expect = 9.6
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -3
Query: 100 RRIVSVSRLGSGRAECRN 47
RRI + +LGS R++ R+
Sbjct: 67 RRIREIEKLGSERSKSRS 84
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.2 bits (40), Expect = 9.6
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -3
Query: 100 RRIVSVSRLGSGRAECRN 47
RRI + +LGS R++ R+
Sbjct: 67 RRIREIEKLGSERSKSRS 84
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.2 bits (40), Expect = 9.6
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -3
Query: 100 RRIVSVSRLGSGRAECRN 47
RRI + +LGS R++ R+
Sbjct: 67 RRIREIEKLGSERSKSRS 84
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.2 bits (40), Expect = 9.6
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -3
Query: 100 RRIVSVSRLGSGRAECRN 47
RRI + +LGS R++ R+
Sbjct: 67 RRIREIEKLGSERSKSRS 84
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.2 bits (40), Expect = 9.6
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -3
Query: 100 RRIVSVSRLGSGRAECRN 47
RRI + +LGS R++ R+
Sbjct: 67 RRIREIEKLGSERSKSRS 84
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 20.2 bits (40), Expect = 9.6
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -3
Query: 100 RRIVSVSRLGSGRAECRN 47
RRI + +LGS R++ R+
Sbjct: 67 RRIREIEKLGSERSKSRS 84
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 20.2 bits (40), Expect = 9.6
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -3
Query: 100 RRIVSVSRLGSGRAECRN 47
RRI + +LGS R++ R+
Sbjct: 67 RRIREIEKLGSERSKSRS 84
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 20.2 bits (40), Expect = 9.6
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -3
Query: 100 RRIVSVSRLGSGRAECRN 47
RRI + +LGS R++ R+
Sbjct: 67 RRIREIEKLGSERSKSRS 84
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 20.2 bits (40), Expect = 9.6
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -3
Query: 100 RRIVSVSRLGSGRAECRN 47
RRI + +LGS R++ R+
Sbjct: 67 RRIREIEKLGSERSKSRS 84
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 20.2 bits (40), Expect = 9.6
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -3
Query: 100 RRIVSVSRLGSGRAECRN 47
RRI + +LGS R++ R+
Sbjct: 67 RRIREIEKLGSERSKSRS 84
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 20.2 bits (40), Expect = 9.6
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -3
Query: 100 RRIVSVSRLGSGRAECRN 47
RRI + +LGS R++ R+
Sbjct: 67 RRIREIEKLGSERSKSRS 84
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 20.2 bits (40), Expect = 9.6
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -3
Query: 100 RRIVSVSRLGSGRAECRN 47
RRI + +LGS R++ R+
Sbjct: 67 RRIREIEKLGSERSKSRS 84
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 20.2 bits (40), Expect = 9.6
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -3
Query: 100 RRIVSVSRLGSGRAECRN 47
RRI + +LGS R++ R+
Sbjct: 67 RRIREIEKLGSERSKSRS 84
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 20.2 bits (40), Expect = 9.6
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -3
Query: 100 RRIVSVSRLGSGRAECRN 47
RRI + +LGS R++ R+
Sbjct: 67 RRIREIEKLGSERSKSRS 84
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 20.2 bits (40), Expect = 9.6
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -3
Query: 100 RRIVSVSRLGSGRAECRN 47
RRI + +LGS R++ R+
Sbjct: 67 RRIREIEKLGSERSKSRS 84
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 20.2 bits (40), Expect = 9.6
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -3
Query: 100 RRIVSVSRLGSGRAECRN 47
RRI + +LGS R++ R+
Sbjct: 67 RRIREIEKLGSERSKSRS 84
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 20.2 bits (40), Expect = 9.6
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -3
Query: 100 RRIVSVSRLGSGRAECRN 47
RRI + +LGS R++ R+
Sbjct: 67 RRIREIEKLGSERSKSRS 84
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 20.2 bits (40), Expect = 9.6
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -3
Query: 100 RRIVSVSRLGSGRAECRN 47
RRI + +LGS R++ R+
Sbjct: 67 RRIREIEKLGSERSKSRS 84
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 20.2 bits (40), Expect = 9.6
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -3
Query: 100 RRIVSVSRLGSGRAECRN 47
RRI + +LGS R++ R+
Sbjct: 67 RRIREIEKLGSERSKSRS 84
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 20.2 bits (40), Expect = 9.6
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -3
Query: 100 RRIVSVSRLGSGRAECRN 47
RRI + +LGS R++ R+
Sbjct: 67 RRIREIEKLGSERSKSRS 84
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 20.2 bits (40), Expect = 9.6
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -3
Query: 100 RRIVSVSRLGSGRAECRN 47
RRI + +LGS R++ R+
Sbjct: 67 RRIREIEKLGSERSKSRS 84
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 20.2 bits (40), Expect = 9.6
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -2
Query: 59 RVPQRQLIPRMLSCCLT 9
++P L+PR +SC T
Sbjct: 647 KMPSMPLLPRPISCHTT 663
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,313
Number of Sequences: 438
Number of extensions: 902
Number of successful extensions: 29
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10503195
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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