Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30179
(698 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF036701-2|AAB88369.2| 625|Caenorhabditis elegans Hypothetical ... 78 5e-15
CU457741-13|CAM36354.1| 608|Caenorhabditis elegans Hypothetical... 74 1e-13
CU457741-11|CAM36352.1| 609|Caenorhabditis elegans Hypothetical... 74 1e-13
AF068201-1|AAC70927.1| 609|Caenorhabditis elegans aminopeptidas... 74 1e-13
AF068200-1|AAC72891.1| 609|Caenorhabditis elegans aminopeptidas... 74 1e-13
U58757-5|AAC47919.3| 555|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z83105-5|CAB05481.1| 196|Caenorhabditis elegans Hypothetical pr... 28 5.6
U28738-2|AAA68309.4| 982|Caenorhabditis elegans Hypothetical pr... 28 5.6
AC090999-21|AAK26150.1| 530|Caenorhabditis elegans Hypothetical... 28 5.6
AF098995-5|AAC67482.1| 477|Caenorhabditis elegans Hypothetical ... 28 7.4
Z70685-1|CAA94607.1| 522|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z19122-1|CAA79529.1| 522|Caenorhabditis elegans hypothetical po... 27 9.8
>AF036701-2|AAB88369.2| 625|Caenorhabditis elegans Hypothetical
protein ZC416.6 protein.
Length = 625
Score = 78.2 bits (184), Expect = 5e-15
Identities = 35/83 (42%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
Frame = +1
Query: 1 EKGSLFLRYLEDLIGGPEVFDDFLRSYLKNFSRKSLDTDEFKAYLFNYFQD-NEKLKSVD 177
EKGS L YLE +GG E+F+ +L+ YLK F+ +++D+ ++K +L+ YF D E L +V+
Sbjct: 390 EKGSALLFYLEQKLGGSEIFEAYLKDYLKTFAHQAIDSWQWKDHLYKYFADQKEVLDTVN 449
Query: 178 WETWLYKSGMPPVIPDYDTSMTK 246
++ W GMPP P+Y SM +
Sbjct: 450 FDLWFNGVGMPPEKPNYGQSMVE 472
>CU457741-13|CAM36354.1| 608|Caenorhabditis elegans Hypothetical
protein C42C1.11c protein.
Length = 608
Score = 73.7 bits (173), Expect = 1e-13
Identities = 32/80 (40%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Frame = +1
Query: 1 EKGSLFLRYLEDLIGGPEVFDDFLRSYLKNFSRKSLDTDEFKAYLFNYFQDNEK-LKSVD 177
EKGS L +E +G F+ FLR Y++ ++ K++ T+E+K YL++ F D + L ++D
Sbjct: 387 EKGSALLFTIEQALGDNSRFEQFLRDYIQKYAYKTVSTEEWKEYLYDSFTDKKVILDNID 446
Query: 178 WETWLYKSGMPPVIPDYDTS 237
W WL+K+G+PP P YD++
Sbjct: 447 WNLWLHKAGLPPK-PKYDST 465
>CU457741-11|CAM36352.1| 609|Caenorhabditis elegans Hypothetical
protein C42C1.11a protein.
Length = 609
Score = 73.7 bits (173), Expect = 1e-13
Identities = 32/80 (40%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Frame = +1
Query: 1 EKGSLFLRYLEDLIGGPEVFDDFLRSYLKNFSRKSLDTDEFKAYLFNYFQDNEK-LKSVD 177
EKGS L +E +G F+ FLR Y++ ++ K++ T+E+K YL++ F D + L ++D
Sbjct: 388 EKGSALLFTIEQALGDNSRFEQFLRDYIQKYAYKTVSTEEWKEYLYDSFTDKKVILDNID 447
Query: 178 WETWLYKSGMPPVIPDYDTS 237
W WL+K+G+PP P YD++
Sbjct: 448 WNLWLHKAGLPPK-PKYDST 466
>AF068201-1|AAC70927.1| 609|Caenorhabditis elegans aminopeptidase-1
protein.
Length = 609
Score = 73.7 bits (173), Expect = 1e-13
Identities = 32/80 (40%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Frame = +1
Query: 1 EKGSLFLRYLEDLIGGPEVFDDFLRSYLKNFSRKSLDTDEFKAYLFNYFQDNEK-LKSVD 177
EKGS L +E +G F+ FLR Y++ ++ K++ T+E+K YL++ F D + L ++D
Sbjct: 388 EKGSALLFTIEQALGDNSRFEQFLRDYIQKYAYKTVSTEEWKEYLYDSFTDKKVILDNID 447
Query: 178 WETWLYKSGMPPVIPDYDTS 237
W WL+K+G+PP P YD++
Sbjct: 448 WNLWLHKAGLPPK-PKYDST 466
>AF068200-1|AAC72891.1| 609|Caenorhabditis elegans aminopeptidase-1
protein.
Length = 609
Score = 73.7 bits (173), Expect = 1e-13
Identities = 32/80 (40%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Frame = +1
Query: 1 EKGSLFLRYLEDLIGGPEVFDDFLRSYLKNFSRKSLDTDEFKAYLFNYFQDNEK-LKSVD 177
EKGS L +E +G F+ FLR Y++ ++ K++ T+E+K YL++ F D + L ++D
Sbjct: 388 EKGSALLFTIEQALGDNSRFEQFLRDYIQKYAYKTVSTEEWKEYLYDSFTDKKVILDNID 447
Query: 178 WETWLYKSGMPPVIPDYDTS 237
W WL+K+G+PP P YD++
Sbjct: 448 WNLWLHKAGLPPK-PKYDST 466
>U58757-5|AAC47919.3| 555|Caenorhabditis elegans Hypothetical
protein C01B10.9 protein.
Length = 555
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 566 CPSTVLETSTDWGRR*KIQAIRKLSQKNGQ 655
C +TVL++ +WGR +Q R LS + +
Sbjct: 468 CKNTVLKSDPNWGRSDTVQGYRPLSNRTNE 497
>Z83105-5|CAB05481.1| 196|Caenorhabditis elegans Hypothetical
protein F14H3.5 protein.
Length = 196
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/58 (20%), Positives = 28/58 (48%)
Frame = +3
Query: 183 NMVVQERYAPRHTRLRYFNDETDNALVAKINQRNATLISYEDVQTFTPHQIMIFLQEL 356
N ++QE RH + F+DE + V + +R L+ + + +++F +++
Sbjct: 91 NQILQEALQARHIEIEAFDDEAERLNVLIVEERR-NLVELQAARKIRKSYLIVFQKQI 147
>U28738-2|AAA68309.4| 982|Caenorhabditis elegans Hypothetical
protein T28D9.7 protein.
Length = 982
Score = 28.3 bits (60), Expect = 5.6
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 9/93 (9%)
Frame = +1
Query: 1 EKGSLFLRYLEDLIGGPEVF--DDFLRSYLKNFSRKSLDTDEFKAYLFNYFQDN---EKL 165
E+ ++ LR +E L VF D ++R+ +FSR + Y N Q EK+
Sbjct: 520 EEIAVILRIMEKLW---HVFMPDSYIRTMTGDFSRMDRIIELMNQYELNKLQRRAWAEKM 576
Query: 166 KSVD----WETWLYKSGMPPVIPDYDTSMTKPI 252
+S +E Y+S P+I D DT++ K I
Sbjct: 577 QSRQMKHFFEDDFYESYYQPLIKDLDTTLVKQI 609
>AC090999-21|AAK26150.1| 530|Caenorhabditis elegans Hypothetical
protein Y82E9BR.2 protein.
Length = 530
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -1
Query: 581 IQWTDIPGIPSPNVGSQNRTLRPRTIGSL 495
+QW +I G+P P + + R RPR +G+L
Sbjct: 69 LQWINIEGVPDPAIIGEFR--RPREMGAL 95
>AF098995-5|AAC67482.1| 477|Caenorhabditis elegans Hypothetical
protein F58E1.4 protein.
Length = 477
Score = 27.9 bits (59), Expect = 7.4
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Frame = +3
Query: 195 QERYAPRHTRLRYFNDETDNALVAKINQRNATLISYEDVQTFTPHQIMIFLQELIKHPPL 374
+ RY+P + + NDE +V+ +N A L E++ T HQ + + +P L
Sbjct: 388 KNRYSPNLSCIAVMNDEPAIKIVSNLNLTYAFLPKIENI--ITKHQRTVVVH---NNPQL 442
Query: 375 PLDILHTLGAEYK---KFLGENF 434
+ Y+ KF+G++F
Sbjct: 443 SSEFYFLYPMSYRSNAKFVGDHF 465
>Z70685-1|CAA94607.1| 522|Caenorhabditis elegans Hypothetical
protein R07D5.1 protein.
Length = 522
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +3
Query: 564 YVRPLY*RPL-PIGEDVRKSKQLENFLKKTDNYMMHVWCSYCGK 692
Y+R L P PI +DV K NFL+K +M+ + ++ G+
Sbjct: 444 YLRVLPDHPAKPIADDVTLRKFTNNFLRKDGVFMLRMISTHAGE 487
>Z19122-1|CAA79529.1| 522|Caenorhabditis elegans hypothetical
polypeptide protein.
Length = 522
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +3
Query: 564 YVRPLY*RPL-PIGEDVRKSKQLENFLKKTDNYMMHVWCSYCGK 692
Y+R L P PI +DV K NFL+K +M+ + ++ G+
Sbjct: 444 YLRVLPDHPAKPIADDVTLRKFTNNFLRKDGVFMLRMISTHAGE 487
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,336,037
Number of Sequences: 27780
Number of extensions: 383275
Number of successful extensions: 1049
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1009
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1044
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -