Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30179
         (698 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g13520.1 68418.m01561 peptidase M1 family protein similar to ...    40   0.002
At4g33090.1 68417.m04715 aminopeptidase M similar to SP|Q11011 P...    29   3.0  
At1g61360.1 68414.m06915 S-locus lectin protein kinase family pr...    29   3.0  
At5g65950.1 68418.m08302 expressed protein                             29   3.9  
At4g22710.1 68417.m03276 cytochrome P450 family protein contains...    29   3.9  
At4g22690.1 68417.m03274 cytochrome P450 family protein flavonoi...    29   3.9  
At1g80720.1 68414.m09471 mitochondrial glycoprotein family prote...    29   3.9  
At3g15070.1 68416.m01906 zinc finger (C3HC4-type RING finger) fa...    28   6.8  
At2g07300.1 68415.m00837 hypothetical protein                          28   6.8  
At3g51180.1 68416.m05603 zinc finger (CCCH-type) family protein ...    27   9.0  

>At5g13520.1 68418.m01561 peptidase M1 family protein similar to
           SP|P09960 Leukotriene A-4 hydrolase (EC 3.3.2.6) (LTA-4
           hydrolase) {Homo sapiens}; contains Pfam profile
           PF01433: Peptidase family M1
          Length = 616

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 24/70 (34%), Positives = 36/70 (51%)
 Frame = +1

Query: 1   EKGSLFLRYLEDLIGGPEVFDDFLRSYLKNFSRKSLDTDEFKAYLFNYFQDNEKLKSVDW 180
           EKG  F+  +E  IG    FD+FL+ Y+  F  KS+DT+ F  +L       E  K ++ 
Sbjct: 398 EKGFQFVLRIERQIGRT-AFDEFLKKYIATFKFKSIDTNTFLEFLKANIPGIE--KEINL 454

Query: 181 ETWLYKSGMP 210
           + W    G+P
Sbjct: 455 QLWTEGVGIP 464


>At4g33090.1 68417.m04715 aminopeptidase M similar to SP|Q11011
           Puromycin-sensitive aminopeptidase (EC 3.4.11.-) (PSA)
           {Mus musculus}; contains Pfam profile PF01433: Peptidase
           family M1
          Length = 879

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 15/44 (34%), Positives = 25/44 (56%)
 Frame = +1

Query: 4   KGSLFLRYLEDLIGGPEVFDDFLRSYLKNFSRKSLDTDEFKAYL 135
           KG+  +R L+  +G  EVF   L +Y+KN +  +  T++  A L
Sbjct: 394 KGASVIRMLQSYLGA-EVFQKSLAAYIKNHAYSNAKTEDLWAAL 436


>At1g61360.1 68414.m06915 S-locus lectin protein kinase family
           protein contains protein kinase domain, Pfam:PF00069;
           contains S-locus glycoprotein family domain,
           Pfam:PF00954
          Length = 821

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +1

Query: 136 FNYFQDNEKLKSVDWETWLYKSGMPPVIPDYDTS 237
           F+Y +DN+ L S  W++W    G+  +  D D S
Sbjct: 702 FSYGKDNKNLLSYAWDSWSENGGVNLLDQDLDDS 735


>At5g65950.1 68418.m08302 expressed protein
          Length = 865

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +3

Query: 294 ISYEDVQTFTPHQIMIFLQELIKHPPLPLDILH 392
           +++ D Q   PH +  F   L+ H PLP++I H
Sbjct: 294 VAFHD-QMIKPHALCSFTLSLLSHLPLPVEIDH 325


>At4g22710.1 68417.m03276 cytochrome P450 family protein contains
           Pfam profile: PF00067 cytochrome p450
          Length = 526

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +1

Query: 55  VFDDFLRSYLKNFSRKSLDTDEFKAYLFNYFQDNEK 162
           +FD  + S++K   +KS + ++F  YL     D+EK
Sbjct: 271 LFDRVMESHVKMVGKKSEEEEDFLQYLLRVKDDDEK 306


>At4g22690.1 68417.m03274 cytochrome P450 family protein flavonoid
           3',5'-hydroxylase Hf1, Petunia x hybrida, PIR2:S38985
          Length = 557

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +1

Query: 55  VFDDFLRSYLKNFSRKSLDTDEFKAYLFNYFQDNEK 162
           +FD  + S++K   +KS + ++F  YL     D+EK
Sbjct: 302 LFDRVMESHVKMVGKKSEEEEDFLQYLLRVKDDDEK 337


>At1g80720.1 68414.m09471 mitochondrial glycoprotein family protein
           / MAM33 family protein similar to SUAPRGA1 [Emericella
           nidulans] GI:6562379; contains Pfam profile PF02330:
           Mitochondrial glycoprotein
          Length = 190

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
 Frame = +1

Query: 43  GGPEV--FDDFLRSYLKNFSRKSLDTDEFKAYLFNYFQDNEKLKSVDW 180
           GGPE    DD L+  L  F  +   +DE   +L  Y ++  K + V W
Sbjct: 132 GGPEFEELDDQLQDALYQFLEERGISDELAVFLHRYMKNKGKAEYVRW 179


>At3g15070.1 68416.m01906 zinc finger (C3HC4-type RING finger)
           family protein similar to C-terminal zinc-finger
           [Glycine max] GI:558543; contains Pfam profile: PF00097
           zinc finger, C3HC4 type (RING finger)
          Length = 486

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = -3

Query: 585 SNTVDGHTRHPVP*CGFTKSNTSPKNDWIFAS-KAQPQPSIQISV 454
           S  + G++++PV  C F + NTS    + F      PQP  Q SV
Sbjct: 131 SEVIPGNSQYPVAPCSFPQLNTSETAPFSFPHFGTYPQPLDQRSV 175


>At2g07300.1 68415.m00837 hypothetical protein 
          Length = 219

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = -3

Query: 231 IVVWYDGGHTALVQPCFPINALQFFIVLEIVKQIGLKLVCV 109
           IV ++DGGH   +    PI+ +     +E VK+I  K+VC+
Sbjct: 180 IVTYFDGGHRMKIASHAPISTVYPDPDIEPVKEI--KMVCI 218


>At3g51180.1 68416.m05603 zinc finger (CCCH-type) family protein
           contains Pfam domain, PF00642: Zinc finger
           C-x8-C-x5-C-x3-H type (and similar)
          Length = 521

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
 Frame = -3

Query: 576 VDGHTRHPVP*CGFTKSNTSPKNDWIFASKAQPQPSIQISVSATPF*KNF--PPKIF 412
           V+G    P P  G   S   P +  +  +K QPQP+ +   S+ P   NF  PP +F
Sbjct: 312 VNGSISPPKPITGKPSSIPMPVHFHVGIAKEQPQPA-RFPSSSLPMNLNFHRPPNVF 367


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,282,109
Number of Sequences: 28952
Number of extensions: 355935
Number of successful extensions: 998
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 970
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 998
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)