Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30176
(708 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0306 - 23977543-23977614,23977709-23977799,23978296-239783... 123 1e-28
01_06_1091 + 34464923-34465026,34465124-34465163,34465245-344653... 123 2e-28
11_06_0394 - 23084485-23084577,23084677-23084802,23085134-230852... 68 8e-12
08_02_1495 + 27526008-27526390,27526462-27526876,27529162-27529323 63 2e-10
09_06_0102 + 20870346-20870518,20870599-20871013,20872180-20872341 60 1e-09
03_01_0568 - 4192514-4192606,4192694-4192753,4192837-4192932,419... 59 3e-09
06_01_0539 + 3869156-3869908 52 4e-07
06_01_0529 + 3831100-3831852 52 4e-07
06_01_0479 + 3419657-3420337 48 7e-06
02_01_0268 + 1784781-1785056,1787314-1787394,1787395-1787856 38 0.006
02_05_0057 + 25472872-25472912,25473012-25473157,25474008-254740... 36 0.042
03_03_0187 + 15253000-15253207,15253281-15253370,15254338-152544... 34 0.13
11_01_0466 + 3607947-3610608,3610725-3611018,3611494-3611895,361... 31 1.2
02_05_0902 + 32620668-32621209,32621847-32622258,32622471-326226... 29 2.7
07_03_1513 - 27327702-27328604,27329957-27329995,27330413-273306... 29 3.6
12_02_0091 - 13498143-13498499,13499005-13499301 29 4.8
09_02_0158 - 5102148-5103818 29 4.8
07_03_1339 + 25879246-25881154,25881502-25881696,25881777-258819... 29 4.8
06_01_0861 + 6527279-6527582,6527619-6527719,6527817-6528042,652... 29 4.8
06_03_0710 + 23792138-23792293,23792974-23793257,23794344-237944... 28 8.4
03_05_0357 - 23424234-23424567,23424796-23424923,23425024-234252... 28 8.4
>05_05_0306 -
23977543-23977614,23977709-23977799,23978296-23978361,
23978399-23978479,23979130-23979176,23979408-23979492,
23979570-23979656,23979728-23979801,23980083-23980166,
23980259-23980298,23980386-23980489
Length = 276
Score = 123 bits (297), Expect = 1e-28
Identities = 76/187 (40%), Positives = 110/187 (58%), Gaps = 4/187 (2%)
Frame = +1
Query: 106 MSSIGTGYDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAV-RS*SHPNCM 282
MSSIGTGYDLS + FSPDGRVFQVEYA KAV+NSGTV+G++ KDG+V V + + +
Sbjct: 1 MSSIGTGYDLSVTTFSPDGRVFQVEYAGKAVDNSGTVVGIKCKDGIVLGVEKLVTSKMIL 60
Query: 283 NLAQTRGYSILMNMLAWLSQGSYQMQDKLSRLLVQRHQTTDLSMAVPKGFKNPPPTEYLM 462
+ R +S+ + + L+ R +V R ++ + + K + P P + L
Sbjct: 61 KGSNRRLHSV--HRHSGLAVAGLAAD---GRQIVSRAKSE--AASYEKVYGEPMPVKELA 113
Query: 463 NEFNVHARVHTIQCCW---PYGCSVVMGHMGQTMEGPQMYMLDPSGVSFHILGCASGKAK 633
+ V + VH W P+GC V++G G +GPQ+YM++PSG+S+ G A GK +
Sbjct: 114 D--RVASYVHLCTLYWWLRPFGCGVILG--GYDRDGPQLYMIEPSGLSYKYFGAALGKGR 169
Query: 634 QAAKNRV 654
QAAK V
Sbjct: 170 QAAKTCV 176
Score = 66.5 bits (155), Expect = 2e-11
Identities = 29/56 (51%), Positives = 40/56 (71%)
Frame = +3
Query: 255 EKLITSKLYEPGANKRIFHIDEHVGMAVAGLISDARQIVETARSEASNYRSQYGSP 422
EKL+TSK+ G+N+R+ + H G+AVAGL +D RQIV A+SEA++Y YG P
Sbjct: 51 EKLVTSKMILKGSNRRLHSVHRHSGLAVAGLAADGRQIVSRAKSEAASYEKVYGEP 106
>01_06_1091 +
34464923-34465026,34465124-34465163,34465245-34465328,
34465457-34465480,34465582-34465655,34465726-34465812,
34465922-34466006,34466215-34466261,34467048-34467113,
34468307-34468397,34468477-34468548
Length = 257
Score = 123 bits (296), Expect = 2e-28
Identities = 79/196 (40%), Positives = 112/196 (57%), Gaps = 7/196 (3%)
Frame = +1
Query: 106 MSSIGTGYDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVRS*SHPNCM- 282
MSSIGTGYDLS + FSPDGRVFQVEYA KAV+NSGTV+G++ KDG+V V M
Sbjct: 1 MSSIGTGYDLSVTTFSPDGRVFQVEYATKAVDNSGTVVGIKCKDGIVLGVEKLVTSKMML 60
Query: 283 NLAQTRGYSILMNM---LAWLSQGSYQMQDKLSRLLVQRHQTTDLSMAVPKGFKNPPPTE 453
+ R +S+ + + ++ + R +V R ++ + + K + P +
Sbjct: 61 EGSNRRIHSVHWHSGLDIILINVMAVAGLAADGRQIVSRAKSE--AASYEKVYGEPISVK 118
Query: 454 YLMNEFNVHARVHTIQCCW---PYGCSVVMGHMGQTMEGPQMYMLDPSGVSFHILGCASG 624
L + V + VH W P+GC V++G G +GPQ+YM++PSGVS+ G A G
Sbjct: 119 ELAD--RVASYVHLCTLYWWLRPFGCGVILG--GYDRDGPQLYMIEPSGVSYKYFGAALG 174
Query: 625 KAKQAAKNRVGKSLKL 672
K +QAAK + K LKL
Sbjct: 175 KGRQAAKTEIEK-LKL 189
Score = 57.2 bits (132), Expect = 1e-08
Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 8/64 (12%)
Frame = +3
Query: 255 EKLITSKLYEPGANKRIFHIDEHVG--------MAVAGLISDARQIVETARSEASNYRSQ 410
EKL+TSK+ G+N+RI + H G MAVAGL +D RQIV A+SEA++Y
Sbjct: 51 EKLVTSKMMLEGSNRRIHSVHWHSGLDIILINVMAVAGLAADGRQIVSRAKSEAASYEKV 110
Query: 411 YGSP 422
YG P
Sbjct: 111 YGEP 114
>11_06_0394 -
23084485-23084577,23084677-23084802,23085134-23085236,
23085895-23085953,23086418-23086519,23086601-23086714,
23087666-23087746,23088073-23088154,23088504-23088556
Length = 270
Score = 67.7 bits (158), Expect = 8e-12
Identities = 30/59 (50%), Positives = 41/59 (69%)
Frame = +3
Query: 246 ICCEKLITSKLYEPGANKRIFHIDEHVGMAVAGLISDARQIVETARSEASNYRSQYGSP 422
+ EK +TS L EP + ++I IDEH+G A++GLI+DAR +VE AR E N+R YG P
Sbjct: 61 LAVEKRVTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEP 119
Score = 58.0 bits (134), Expect = 7e-09
Identities = 45/174 (25%), Positives = 73/174 (41%)
Frame = +1
Query: 121 TGYDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVRS*SHPNCMNLAQTR 300
T YD + FSP+GR+FQVEYA +A++ T IGL+ KDGVV AV + +
Sbjct: 19 TEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKDGVVLAVEKRVTSPLLEPSSVE 78
Query: 301 GYSILMNMLAWLSQGSYQMQDKLSRLLVQRHQTTDLSMAVPKGFKNPPPTEYLMNEFNVH 480
+ + G + D + + R +T + + + T+ + +
Sbjct: 79 KIMEIDEHIGCAMSG--LIADARTLVEHARVETQNHRFSYGEPMTVESTTQAICDLALRF 136
Query: 481 ARVHTIQCCWPYGCSVVMGHMGQTMEGPQMYMLDPSGVSFHILGCASGKAKQAA 642
P+G S+++ G GP +Y DPSG + A G + A
Sbjct: 137 GEGDEESMSRPFGVSLLIA--GHDENGPSLYYTDPSGTFWQCNAKAIGSGSEGA 188
>08_02_1495 + 27526008-27526390,27526462-27526876,27529162-27529323
Length = 319
Score = 63.3 bits (147), Expect = 2e-10
Identities = 50/182 (27%), Positives = 79/182 (43%), Gaps = 1/182 (0%)
Frame = +1
Query: 127 YDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVRS*SHPNCMNLAQTRGY 306
YD + + FSPDG +FQVEYA +AV +G+RG D VV V S P + R
Sbjct: 74 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLGVEKKSTPKLQDSRSMRKI 133
Query: 307 SILMNMLAWLSQGSYQMQDKLSRLLVQRHQTTDLSMAVPKGFKNPPPTEYLMNEF-NVHA 483
+ L +A G D +R+L+ R + S + ++P EY+ +
Sbjct: 134 ASLDTHIALACAG--LKAD--ARVLINRARVECQSHRLT--VEDPVTVEYITRYIAGLQQ 187
Query: 484 RVHTIQCCWPYGCSVVMGHMGQTMEGPQMYMLDPSGVSFHILGCASGKAKQAAKNRVGKS 663
+ P+G S ++ E P +Y DPSG A+G+ + + + K+
Sbjct: 188 KYTQSGGVRPFGLSTLIVGFDPYTEKPALYQTDPSGTFSAWKANATGRNSNSMREFLEKN 247
Query: 664 LK 669
K
Sbjct: 248 YK 249
>09_06_0102 + 20870346-20870518,20870599-20871013,20872180-20872341
Length = 249
Score = 60.5 bits (140), Expect = 1e-09
Identities = 49/183 (26%), Positives = 79/183 (43%), Gaps = 2/183 (1%)
Frame = +1
Query: 127 YDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVRS*SHPNCMNLAQTRGY 306
YD + + FSPDG +FQVEYA +AV +G+RG D VV V S P + R
Sbjct: 4 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGSDTVVLGVEKKSTPKLQDSRSVRKI 63
Query: 307 SILMNMLAWLSQGSYQMQDKLSRLLVQRHQTTDLS--MAVPKGFKNPPPTEYLMNEFNVH 480
+ L +A G D +R+L+ R + S + V T Y+ +
Sbjct: 64 ASLDTHIALACAG--LKAD--ARVLINRARVECQSHRLTVEDAVTVEYITRYIAGLQQKY 119
Query: 481 ARVHTIQCCWPYGCSVVMGHMGQTMEGPQMYMLDPSGVSFHILGCASGKAKQAAKNRVGK 660
+ ++ P+G S ++ + P +Y DPSG A+G+ + + + K
Sbjct: 120 TQSGGVR---PFGLSTLIVGFDPYTDKPALYQTDPSGTFSAWKANATGRNSNSMREFLEK 176
Query: 661 SLK 669
+ K
Sbjct: 177 NYK 179
Score = 41.1 bits (92), Expect = 8e-04
Identities = 19/50 (38%), Positives = 31/50 (62%)
Frame = +3
Query: 255 EKLITSKLYEPGANKRIFHIDEHVGMAVAGLISDARQIVETARSEASNYR 404
EK T KL + + ++I +D H+ +A AGL +DAR ++ AR E ++R
Sbjct: 47 EKKSTPKLQDSRSVRKIASLDTHIALACAGLKADARVLINRARVECQSHR 96
>03_01_0568 -
4192514-4192606,4192694-4192753,4192837-4192932,
4193088-4193170,4193289-4193347,4193463-4193559,
4194151-4194232,4194353-4194447,4194585-4194660
Length = 246
Score = 59.3 bits (137), Expect = 3e-09
Identities = 54/186 (29%), Positives = 86/186 (46%), Gaps = 2/186 (1%)
Frame = +1
Query: 118 GTGYDLSASQFSPDGRVFQVEYAAKAVENSG-TVIGLRGKDGVVFAVRS*SHPNCMNLAQ 294
G GYD + FSP+GR++QVEYA KAV+++G T IG+RGKD V + ++
Sbjct: 6 GAGYDRHITIFSPEGRLYQVEYAFKAVKSAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTS 65
Query: 295 TRGYSILMNMLAWLSQGSYQMQDKLSRLLVQRHQTTDLSMAVPKGFKNPPPTEYLMNEFN 474
+ + L+ G D +R LV + + G++ P + L
Sbjct: 66 VTHLFPITKYIGLLATG--LTAD--ARSLVYQARNEAAEFRFKWGYE--MPVDVLAKWIA 119
Query: 475 VHARVHTIQCCWPYGCSVVMGHMGQTME-GPQMYMLDPSGVSFHILGCASGKAKQAAKNR 651
A+V+T Q + VV +G E Q++ DP+G F ++G +Q A N
Sbjct: 120 DKAQVYT-QHAYMRPLGVVAMVLGYDEEKNAQLFKCDPAGHFFGHKATSAGLKEQEAINF 178
Query: 652 VGKSLK 669
+ K +K
Sbjct: 179 LEKKMK 184
>06_01_0539 + 3869156-3869908
Length = 250
Score = 52.0 bits (119), Expect = 4e-07
Identities = 48/188 (25%), Positives = 85/188 (45%), Gaps = 5/188 (2%)
Frame = +1
Query: 127 YDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVRS*SHPNCMNLAQT--R 300
YD + FSP+GR++QVEYA +A+ N+G+ +G+ DGVV + +++ +
Sbjct: 5 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRSAEK 64
Query: 301 GYSILMNMLAWLS--QGSYQMQDKLSRLLVQRHQTTDLSMAVPKGFKNPPPTEYLMNEFN 474
Y I ++ ++ + +RL QR+ + ++ P P E L+
Sbjct: 65 MYKIDSHLACAVAGIMSDANILLNTARLHAQRYALS---------YQEPIPVEQLVQSLC 115
Query: 475 VHARVHT-IQCCWPYGCSVVMGHMGQTMEGPQMYMLDPSGVSFHILGCASGKAKQAAKNR 651
+ +T P+G S + + G Q+YM DPSG A G QAA++
Sbjct: 116 DTKQGYTQFGGLRPFGVSFLFAGWDK-HHGFQLYMSDPSGNYSGWKAAAVGANSQAAQSM 174
Query: 652 VGKSLKLG 675
+ + + G
Sbjct: 175 LKQDYRDG 182
Score = 48.0 bits (109), Expect = 7e-06
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +3
Query: 255 EKLITSKLYEPGAN-KRIFHIDEHVGMAVAGLISDARQIVETARSEASNYRSQYGSP 422
EK +TSKL + + ++++ ID H+ AVAG++SDA ++ TAR A Y Y P
Sbjct: 48 EKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEP 104
>06_01_0529 + 3831100-3831852
Length = 250
Score = 52.0 bits (119), Expect = 4e-07
Identities = 48/188 (25%), Positives = 85/188 (45%), Gaps = 5/188 (2%)
Frame = +1
Query: 127 YDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVRS*SHPNCMNLAQT--R 300
YD + FSP+GR++QVEYA +A+ N+G+ +G+ DGVV + +++ +
Sbjct: 5 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRSAEK 64
Query: 301 GYSILMNMLAWLS--QGSYQMQDKLSRLLVQRHQTTDLSMAVPKGFKNPPPTEYLMNEFN 474
Y I ++ ++ + +RL QR+ + ++ P P E L+
Sbjct: 65 MYKIDSHLACAVAGIMSDANILLNTARLHAQRYALS---------YQEPIPVEQLVQSLC 115
Query: 475 VHARVHT-IQCCWPYGCSVVMGHMGQTMEGPQMYMLDPSGVSFHILGCASGKAKQAAKNR 651
+ +T P+G S + + G Q+YM DPSG A G QAA++
Sbjct: 116 DTKQGYTQFGGLRPFGVSFLFAGWDK-HHGFQLYMSDPSGNYSGWKAAAVGANSQAAQSM 174
Query: 652 VGKSLKLG 675
+ + + G
Sbjct: 175 LKQDYRDG 182
Score = 48.0 bits (109), Expect = 7e-06
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +3
Query: 255 EKLITSKLYEPGAN-KRIFHIDEHVGMAVAGLISDARQIVETARSEASNYRSQYGSP 422
EK +TSKL + + ++++ ID H+ AVAG++SDA ++ TAR A Y Y P
Sbjct: 48 EKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEP 104
>06_01_0479 + 3419657-3420337
Length = 226
Score = 48.0 bits (109), Expect = 7e-06
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +3
Query: 255 EKLITSKLYEPGAN-KRIFHIDEHVGMAVAGLISDARQIVETARSEASNYRSQYGSP 422
EK +TSKL + + ++++ ID H+ AVAG++SDA ++ TAR A Y Y P
Sbjct: 24 EKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEP 80
>02_01_0268 + 1784781-1785056,1787314-1787394,1787395-1787856
Length = 272
Score = 38.3 bits (85), Expect = 0.006
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +3
Query: 297 KRIFHIDEHVGMAVAGLISDARQIVETARSEASNYRSQYGSP 422
+++F + +H G+A+AGL +D R + RSE N+ Y +P
Sbjct: 36 RKVFRVADHAGVALAGLTADGRVLSRFLRSECINHAFVYDAP 77
>02_05_0057 +
25472872-25472912,25473012-25473157,25474008-25474072,
25474182-25474228,25474922-25474997,25475176-25475243,
25475862-25475931,25476178-25476263,25476418-25476480,
25476556-25476621,25476740-25476788
Length = 258
Score = 35.5 bits (78), Expect = 0.042
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +1
Query: 127 YDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRG 231
Y S + FSP G++ Q+E+A AV + T +G++G
Sbjct: 6 YSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKG 40
Score = 33.9 bits (74), Expect = 0.13
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +1
Query: 511 PYGCSVVMGHMGQTMEGPQMYMLDPSGVSFHILGCASGKAKQAAKNRVGK 660
P+G S+++ G GPQ+Y +DPSG F A GK AK + K
Sbjct: 152 PFGVSLLIA--GYDDNGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEK 199
>03_03_0187 +
15253000-15253207,15253281-15253370,15254338-15254402,
15254489-15254535,15255195-15255270,15255432-15255499,
15255793-15255862,15256024-15256109,15256328-15256390,
15256472-15256537,15256938-15256986
Length = 295
Score = 33.9 bits (74), Expect = 0.13
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +1
Query: 511 PYGCSVVMGHMGQTMEGPQMYMLDPSGVSFHILGCASGKAKQAAKNRVGK 660
P+G S+++ G GPQ+Y +DPSG F A GK AK + K
Sbjct: 189 PFGVSLLIA--GYDDNGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEK 236
>11_01_0466 + 3607947-3610608,3610725-3611018,3611494-3611895,
3611984-3612217,3614113-3614138,3614446-3614633,
3615707-3617670,3617938-3618423,3618527-3618894
Length = 2207
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 82 KYIKQCVNMSSIGTGYDLSASQFSPDGRVFQVEYAAKAVENSGTV-IGLRGKDGVVFAV 255
+ I C + S G + +F P G ++QV Y+ A ENS T GL + +V +
Sbjct: 1957 RIITACSTVDSKGNDFKALIYEFMPRGDLYQVLYSTCADENSSTSHFGLAQRVSIVMDI 2015
>02_05_0902 +
32620668-32621209,32621847-32622258,32622471-32622675,
32622712-32622806,32622945-32623557,32623652-32623820,
32624392-32624749,32625226-32625336,32626207-32626561,
32627262-32627484,32627837-32628058,32628628-32628781
Length = 1152
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = -2
Query: 254 TANTTPSFPRRPITVPEFSTAFAAYSTWKTRPS 156
+++++ FP P++ PE S+A AA S W + PS
Sbjct: 32 SSSSSSLFPLFPLSAPEESSAPAAGSQWLSNPS 64
>07_03_1513 - 27327702-27328604,27329957-27329995,27330413-27330692,
27330772-27330942,27331025-27331857,27331939-27332400,
27332479-27333212,27333301-27333430
Length = 1183
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +2
Query: 542 WDRLWKALRCIC*IPVVYLFIFWVAHREKP 631
WD++W +L+CI P V LFI+ +AH P
Sbjct: 1011 WDKIW-SLQCI---PKVKLFIWRLAHNSLP 1036
>12_02_0091 - 13498143-13498499,13499005-13499301
Length = 217
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/60 (28%), Positives = 22/60 (36%)
Frame = +1
Query: 406 LSMAVPKGFKNPPPTEYLMNEFNVHARVHTIQCCWPYGCSVVMGHMGQTMEGPQMYMLDP 585
LS+ +NPP T E +V T PY S ++ H T P M P
Sbjct: 66 LSLISGNVLRNPPATRSSQRESRNSTKVETQDMRPPYSSSTLLSHSLHTTAAPPFSMPPP 125
>09_02_0158 - 5102148-5103818
Length = 556
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -3
Query: 358 ASDMSPATAMPTCSSIWNILLFAPGSYNLDVINFSQQI 245
AS + TC+ I+ + GS+NLDV+ F Q +
Sbjct: 128 ASAQQQPPPLITCAKKCGIVKYLTGSFNLDVVGFLQWV 165
>07_03_1339 + 25879246-25881154,25881502-25881696,25881777-25881928,
25882147-25882607,25883723-25883810,25884066-25884135,
25884288-25884361,25884456-25884524,25884647-25884724,
25884946-25885070,25885168-25885240,25885508-25885566,
25885650-25886027,25886134-25886236,25886332-25886544
Length = 1348
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = -1
Query: 342 LRQPCQHVHQYGISSCLR--QVHTIWM*LTSHSKYHPVFSSEANYCS 208
L P H+ +G +SC R Q + W S SK +P+F N CS
Sbjct: 1087 LAAPVLHISGFG-ASCSRVWQRSSYWSTRQSQSKVYPLFIPRKNNCS 1132
>06_01_0861 +
6527279-6527582,6527619-6527719,6527817-6528042,
6528132-6528475,6528624-6528989,6529080-6529347,
6529479-6529696
Length = 608
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/62 (24%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = -1
Query: 297 CLRQVHTIWM*LTSHSKYHPVFSSEANYCSRIFYSLCSIFHLENA-TIRRKLRSR*VIAS 121
C++ + T +SH ++HP F C H+++ R+K +S+ V+A+
Sbjct: 113 CIKSIDTHQKITSSHGRFHPYFQGCIGALDGTHIPACVPMHMQDRFRGRKKFQSQNVLAA 172
Query: 120 SD 115
D
Sbjct: 173 VD 174
>06_03_0710 +
23792138-23792293,23792974-23793257,23794344-23794499,
23795318-23795804,23795864-23796181,23796773-23797165,
23797752-23798021
Length = 687
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +1
Query: 247 FAVRS*SHPNCMNLAQTRGYSILMNMLAWLSQGSYQMQ 360
F R+ + + M LAQ+ G ++L+ +L W SQ S + Q
Sbjct: 426 FRERAADYLDKMRLAQSVGVALLLGLLWWKSQTSNEAQ 463
>03_05_0357 -
23424234-23424567,23424796-23424923,23425024-23425205,
23425255-23425504
Length = 297
Score = 27.9 bits (59), Expect = 8.4
Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Frame = -1
Query: 303 SSCLRQ-VHTIWM*LTSHSKYHPVFSSEANYCSRIFYSLCSIFHLENATIRRKLRSR*VI 127
SSC+R+ +HT LT + H + + C R F IFH + KLR + +
Sbjct: 29 SSCIRRPMHTSK--LTGGCRVHEILTGHERLCKRNFRMEVDIFH----ALVNKLREKEYL 82
Query: 126 ASSDRTHVYALFNIFRFLPRQIH 58
+ L + F+ P IH
Sbjct: 83 TVAKNATNETLQDWFQHSPDTIH 105
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,083,272
Number of Sequences: 37544
Number of extensions: 513298
Number of successful extensions: 1324
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1250
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1321
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1827423340
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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