Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30176
(708 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48544-9|CAA88436.2| 250|Caenorhabditis elegans Hypothetical pr... 107 1e-23
Z80215-2|CAB02269.1| 253|Caenorhabditis elegans Hypothetical pr... 63 2e-10
Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical pr... 56 2e-08
Z79754-8|CAB02097.1| 248|Caenorhabditis elegans Hypothetical pr... 51 9e-07
Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome al... 49 3e-06
AF036694-1|AAB88344.1| 260|Caenorhabditis elegans Proteasome al... 41 0.001
Z19153-4|CAA79548.1| 525|Caenorhabditis elegans Hypothetical pr... 29 2.5
L12018-2|AAK68341.1| 525|Caenorhabditis elegans G protein regul... 29 2.5
Z68318-3|CAD57704.1| 337|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z79598-3|CAB01865.1| 680|Caenorhabditis elegans Hypothetical pr... 29 4.3
AJ242473-1|CAB43345.1| 680|Caenorhabditis elegans SYM-1 protein... 29 4.3
Z75531-4|CAA99805.1| 408|Caenorhabditis elegans Hypothetical pr... 28 5.7
U00031-8|AAK18869.1| 201|Caenorhabditis elegans Hypothetical pr... 28 7.5
AF099001-6|AAC68738.2| 661|Caenorhabditis elegans Lateral signa... 27 9.9
>Z48544-9|CAA88436.2| 250|Caenorhabditis elegans Hypothetical
protein ZK945.2 protein.
Length = 250
Score = 107 bits (256), Expect = 1e-23
Identities = 69/187 (36%), Positives = 107/187 (57%), Gaps = 2/187 (1%)
Frame = +1
Query: 106 MSSIGTGYDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVF-AVRS*SHPNCM 282
MSSIGTGYDL+AS FSPDGR+FQVEYA KAV+N+GT+I +RGK+GVV A + S
Sbjct: 1 MSSIGTGYDLAASTFSPDGRIFQVEYAQKAVDNAGTMIAIRGKNGVVVVADKLISSKLYT 60
Query: 283 NLAQTRGYSILMNMLAWLSQGSYQMQDKLSRLLVQRHQTTDLSMAVPKGFKNPPPTEYLM 462
+ A R +++ N+ ++ G+Y L ++ +M K ++ P P + +
Sbjct: 61 DNANPRMFNVNDNVGVAVA-GNYPDGFAL------KNYAYGEAMKWLKDYREPMPIQNIA 113
Query: 463 NEFNVHARVHTIQCCWPYGCSVV-MGHMGQTMEGPQMYMLDPSGVSFHILGCASGKAKQA 639
N + +HT+ P+G M QT G ++++++PSG+++ A GK +QA
Sbjct: 114 NSVAEYIHIHTLGISRPFGAGAFFMSWNKQT--GGRLFLVEPSGLNYEYKAWAVGKHRQA 171
Query: 640 AKNRVGK 660
AK + K
Sbjct: 172 AKAEIEK 178
Score = 48.8 bits (111), Expect = 4e-06
Identities = 23/59 (38%), Positives = 35/59 (59%)
Frame = +3
Query: 246 ICCEKLITSKLYEPGANKRIFHIDEHVGMAVAGLISDARQIVETARSEASNYRSQYGSP 422
+ +KLI+SKLY AN R+F+++++VG+AVAG D + A EA + Y P
Sbjct: 48 VVADKLISSKLYTDNANPRMFNVNDNVGVAVAGNYPDGFALKNYAYGEAMKWLKDYREP 106
>Z80215-2|CAB02269.1| 253|Caenorhabditis elegans Hypothetical
protein C36B1.4 protein.
Length = 253
Score = 62.9 bits (146), Expect = 2e-10
Identities = 50/179 (27%), Positives = 87/179 (48%), Gaps = 6/179 (3%)
Frame = +1
Query: 127 YDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVRS*SHPNCMNLAQTRGY 306
YD + + FSPDG +FQVEYA +AV+ T +G+RGKD +V V S P + R
Sbjct: 4 YDRAITIFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDCIVIGVEKKSIPALQDDRTIRKI 63
Query: 307 SIL----MNMLAWLSQGSYQMQDKLSRLLVQRHQTTDLSMAVPKGFKNPPPTEYLMNEF- 471
++ M A LS + + D+ +R+ Q ++ T ++P Y+
Sbjct: 64 HMIDDHVMLAFAGLSADARVLVDR-ARIECQSYKLT---------LEDPVTVAYISRYIA 113
Query: 472 NVHARVHTIQCCWPYGCSVVMGHMGQTMEG-PQMYMLDPSGVSFHILGCASGKAKQAAK 645
N R P+G S+++G G +G P+++ +PSG + + A+G+ ++ +
Sbjct: 114 NTKQRFTQSPGRRPFGISMLIG--GFDHDGTPRLFKTEPSGAYYEYVANATGRGEKPVR 170
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/56 (37%), Positives = 31/56 (55%)
Frame = +3
Query: 255 EKLITSKLYEPGANKRIFHIDEHVGMAVAGLISDARQIVETARSEASNYRSQYGSP 422
EK L + ++I ID+HV +A AGL +DAR +V+ AR E +Y+ P
Sbjct: 47 EKKSIPALQDDRTIRKIHMIDDHVMLAFAGLSADARVLVDRARIECQSYKLTLEDP 102
>Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical
protein D1054.2 protein.
Length = 231
Score = 56.0 bits (129), Expect = 2e-08
Identities = 51/191 (26%), Positives = 85/191 (44%), Gaps = 5/191 (2%)
Frame = +1
Query: 115 IGTGYDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVRS*SHPNCMNLAQ 294
+G Y S + FSP G++ Q+EYA AV+N +GLR KDGVV A + + + Q
Sbjct: 1 MGDHYGFSLTTFSPSGKLMQIEYALNAVKNGQPSVGLRAKDGVVLATENVG--SVLTDDQ 58
Query: 295 TRGYSILMNMLAWLSQGSYQMQDKLSRLLVQRHQTTDLSMAVPKGFKNPPPTEYLMNEFN 474
+ I ++ Y R+LV++ ++M + PT L+ +
Sbjct: 59 PKVEQISKHIGC-----VYSGMGPDFRILVKK--ARKIAMEYEMMYGEEMPTIQLVTDIA 111
Query: 475 VHARVHTIQ-CCWPYGCSVVMGHMGQTMEGPQMYMLDPSGVSFHILGCASGK----AKQA 639
+ +T P+G S+++ + P ++ DPSG F A GK AK
Sbjct: 112 AVMQEYTQSGGVRPFGASLLIAGWDKNPGRPLLFQCDPSGAYFAWKATALGKNDVNAKTF 171
Query: 640 AKNRVGKSLKL 672
+ R ++L+L
Sbjct: 172 LEKRFSEALEL 182
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 300 RIFHIDEHVGMAVAGLISDARQIVETARSEASNYRSQYG 416
++ I +H+G +G+ D R +V+ AR A Y YG
Sbjct: 60 KVEQISKHIGCVYSGMGPDFRILVKKARKIAMEYEMMYG 98
>Z79754-8|CAB02097.1| 248|Caenorhabditis elegans Hypothetical
protein F25H2.9 protein.
Length = 248
Score = 50.8 bits (116), Expect = 9e-07
Identities = 51/188 (27%), Positives = 80/188 (42%), Gaps = 6/188 (3%)
Frame = +1
Query: 127 YDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVRS*SHPNCMNLAQTRGY 306
YD + FSP+GR+FQVEYA +AV+ T IG++ +GV+ A S M
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAVKLGSTSIGIKTSEGVLLAAEKRSTSKLMVNDAIEKI 67
Query: 307 SILMNMLAWLSQGSYQMQDKLSRLLVQRHQ--TTDLSMAVPKGFKNPPPTEYLMNEFNVH 480
S + + G + D SR LV+R Q + + + T+ + N +
Sbjct: 68 SKVDQHIGVTFAG--LIAD--SRTLVERAQIEAQNFWFTYNRKIRVEDVTQSVAN-LALQ 122
Query: 481 ARVHTIQCCWPYGCSVVMGHMGQTMEGPQMYMLDPSGVSFHI----LGCASGKAKQAAKN 648
++ V M G EG +++ LDPSG +G AS A+Q K
Sbjct: 123 FGDDDVKASMSRPFGVAMLFAGVDQEGAKLFHLDPSGTFIDCKAKSIGAASDGAEQNLKE 182
Query: 649 RVGKSLKL 672
+ +L +
Sbjct: 183 QYHDALTI 190
Score = 50.4 bits (115), Expect = 1e-06
Identities = 24/56 (42%), Positives = 36/56 (64%)
Frame = +3
Query: 246 ICCEKLITSKLYEPGANKRIFHIDEHVGMAVAGLISDARQIVETARSEASNYRSQY 413
+ EK TSKL A ++I +D+H+G+ AGLI+D+R +VE A+ EA N+ Y
Sbjct: 48 LAAEKRSTSKLMVNDAIEKISKVDQHIGVTFAGLIADSRTLVERAQIEAQNFWFTY 103
>Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical
protein C15H11.7 protein.
Length = 246
Score = 50.0 bits (114), Expect = 2e-06
Identities = 47/185 (25%), Positives = 87/185 (47%), Gaps = 3/185 (1%)
Frame = +1
Query: 124 GYDLSASQFSPDGRVFQVEYAAKAVENSG-TVIGLRGKDGVVFAVRS*SHPNCMNLAQT- 297
G+D + FSP+GRV+QVEYA KA+ ++ T + ++G D V AV+ P+ + +A T
Sbjct: 8 GFDRHITIFSPEGRVYQVEYAFKAINSTNLTAVAVKGADAAVIAVQK-RVPDSLIVADTV 66
Query: 298 RGYSILMNMLAWLSQGSYQMQDKLSRLLVQRHQTTDLSMAVPKGFKNPPPTEYLMNEFNV 477
+ + + G + D ++ ++R Q S G+ P E L +
Sbjct: 67 TSVYQISQSVGCCAIG--MIPD--AKFQIKRAQGEAASWKYKNGY--DMPCELLAKKMAD 120
Query: 478 HARVHTIQC-CWPYGCSVVMGHMGQTMEGPQMYMLDPSGVSFHILGCASGKAKQAAKNRV 654
+ +T GC+++ +GP++Y +DP+G + G + G + A + +
Sbjct: 121 LNQYYTQNAEMRSLGCALLFISYDDE-KGPEVYRVDPAGYYRGMKGVSVGVKQLPATSFL 179
Query: 655 GKSLK 669
K +K
Sbjct: 180 EKKIK 184
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/57 (24%), Positives = 29/57 (50%)
Frame = +3
Query: 246 ICCEKLITSKLYEPGANKRIFHIDEHVGMAVAGLISDARQIVETARSEASNYRSQYG 416
I +K + L ++ I + VG G+I DA+ ++ A+ EA++++ + G
Sbjct: 50 IAVQKRVPDSLIVADTVTSVYQISQSVGCCAIGMIPDAKFQIKRAQGEAASWKYKNG 106
>AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome alpha
subunit protein 3 protein.
Length = 250
Score = 49.2 bits (112), Expect = 3e-06
Identities = 19/42 (45%), Positives = 31/42 (73%)
Frame = +1
Query: 127 YDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFA 252
YD + FSP+GR++QVEYA +A+ ++GT +G+ +G+V A
Sbjct: 5 YDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILSSEGIVVA 46
Score = 33.9 bits (74), Expect = 0.11
Identities = 14/58 (24%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +3
Query: 246 ICCEKLITSKLYEPGA-NKRIFHIDEHVGMAVAGLISDARQIVETARSEASNYRSQYG 416
+ E+ KL + ++++ + +++ VAG+ +DA ++ R A++YR+ YG
Sbjct: 45 VAAERKNVHKLLDDSVMTEKVYRLSDNISCTVAGITADANILINHLRWWAASYRNSYG 102
>AF036694-1|AAB88344.1| 260|Caenorhabditis elegans Proteasome alpha
subunit protein 6 protein.
Length = 260
Score = 40.7 bits (91), Expect = 0.001
Identities = 15/39 (38%), Positives = 27/39 (69%)
Frame = +3
Query: 297 KRIFHIDEHVGMAVAGLISDARQIVETARSEASNYRSQY 413
K+++ ID H G+++AGL+SD R + ++E S++R Y
Sbjct: 61 KKVYEIDTHAGVSIAGLLSDGRILARYLQTECSSWRWDY 99
Score = 39.5 bits (88), Expect = 0.002
Identities = 41/181 (22%), Positives = 79/181 (43%), Gaps = 1/181 (0%)
Frame = +1
Query: 127 YDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVRS*SHPNCMNLAQTRGY 306
YD + +SP GR+ QVEYA +A++ +G++ + V + N ++ Q + Y
Sbjct: 6 YDGDVTVWSPQGRLHQVEYAVEAMKQGSATVGIKSETHAVIVALKRAQ-NDLSSHQKKVY 64
Query: 307 SILMNMLAWLSQGSYQMQDKLSRLLVQRHQTTDLSMAVPKGFKNPPPTEYLMNEFNVHAR 486
I + A +S + D R+L + QT S +K P + L + +
Sbjct: 65 EI--DTHAGVSIAGL-LSD--GRILARYLQTECSSWR--WDYKQAVPIKKLAESMQLKLQ 117
Query: 487 VHT-IQCCWPYGCSVVMGHMGQTMEGPQMYMLDPSGVSFHILGCASGKAKQAAKNRVGKS 663
+T P+G +++ G +G + DPS + G + G Q+A+ + ++
Sbjct: 118 ANTQYYGRRPFGVGILIA--GYDKDGAHIIQTDPSAEVVSMHGTSIGARSQSARTYLERN 175
Query: 664 L 666
+
Sbjct: 176 V 176
>Z19153-4|CAA79548.1| 525|Caenorhabditis elegans Hypothetical
protein C38C10.4 protein.
Length = 525
Score = 29.5 bits (63), Expect = 2.5
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +3
Query: 174 SGICCKGCRKFWNSNWPPRKRRGGICCEKLITSKLY 281
+ +C +GC + SN +K+ IC E++ KL+
Sbjct: 140 ASVCLEGCERDVESNQDEKKKLLSICAEQIAAVKLF 175
>L12018-2|AAK68341.1| 525|Caenorhabditis elegans G protein
regulator protein 1 protein.
Length = 525
Score = 29.5 bits (63), Expect = 2.5
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +3
Query: 174 SGICCKGCRKFWNSNWPPRKRRGGICCEKLITSKLY 281
+ +C +GC + SN +K+ IC E++ KL+
Sbjct: 140 ASVCLEGCERDVESNQDEKKKLLSICAEQIAAVKLF 175
>Z68318-3|CAD57704.1| 337|Caenorhabditis elegans Hypothetical
protein T21B10.2b protein.
Length = 337
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +1
Query: 82 KYIKQCVNMSSIGTGYDLSASQFSPDGRVFQVEYAAKAVENSGTVIG 222
KYI + I G D++AS+F DG+ + +++ A ++S + G
Sbjct: 132 KYIAELAGTGKISIGMDVAASEFFKDGK-YDLDFKNPASDSSKWLSG 177
>Z79598-3|CAB01865.1| 680|Caenorhabditis elegans Hypothetical
protein C44H4.3 protein.
Length = 680
Score = 28.7 bits (61), Expect = 4.3
Identities = 24/98 (24%), Positives = 40/98 (40%)
Frame = +1
Query: 178 EYAAKAVENSGTVIGLRGKDGVVFAVRS*SHPNCMNLAQTRGYSILMNMLAWLSQGSYQM 357
E+ +KAV N +I L K + A+R + +NL S+ N ++ + G+ Q
Sbjct: 195 EFPSKAVRNMNNLIALHIKYNKINAIR---QNDFVNLTSLSMLSLNGNNISEIKGGALQN 251
Query: 358 QDKLSRLLVQRHQTTDLSMAVPKGFKNPPPTEYLMNEF 471
L L + + L V + FK + N F
Sbjct: 252 TPNLHYLYLNENNLQTLDNGVLEQFKQLQVLDLSFNNF 289
>AJ242473-1|CAB43345.1| 680|Caenorhabditis elegans SYM-1 protein
protein.
Length = 680
Score = 28.7 bits (61), Expect = 4.3
Identities = 24/98 (24%), Positives = 40/98 (40%)
Frame = +1
Query: 178 EYAAKAVENSGTVIGLRGKDGVVFAVRS*SHPNCMNLAQTRGYSILMNMLAWLSQGSYQM 357
E+ +KAV N +I L K + A+R + +NL S+ N ++ + G+ Q
Sbjct: 195 EFPSKAVRNMNNLIALHIKYNKINAIR---QNDFVNLTSLSMLSLNGNNISEIKGGALQN 251
Query: 358 QDKLSRLLVQRHQTTDLSMAVPKGFKNPPPTEYLMNEF 471
L L + + L V + FK + N F
Sbjct: 252 TPNLHYLYLNENNLQTLDNGVLEQFKQLQVLDLSFNNF 289
>Z75531-4|CAA99805.1| 408|Caenorhabditis elegans Hypothetical
protein C54D10.4 protein.
Length = 408
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +1
Query: 433 KNPPPTEYLMNEFNVHARVHTIQCCWPYGCSVVMGHMGQT 552
K+ P T LMN++ + RV CC Y ++ G +T
Sbjct: 262 KHLPVTSSLMNQYLIADRVQRRYCCCGYNGAIDYGFFNKT 301
>U00031-8|AAK18869.1| 201|Caenorhabditis elegans Hypothetical
protein B0361.10 protein.
Length = 201
Score = 27.9 bits (59), Expect = 7.5
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +2
Query: 371 RDCSFRGIKLQISVWQSPR 427
+DCS+ G+K + WQ+PR
Sbjct: 119 KDCSYTGLKDLLEKWQNPR 137
>AF099001-6|AAC68738.2| 661|Caenorhabditis elegans Lateral
signaling target protein 2 protein.
Length = 661
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -3
Query: 352 DMSPATAMPTCSSIWNILLFAPGSYNLDV 266
D S A+P +W +L+++ G+ N+DV
Sbjct: 221 DPSVMIAIPRLGIVWGLLVYSNGALNVDV 249
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,809,123
Number of Sequences: 27780
Number of extensions: 444680
Number of successful extensions: 1055
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1018
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1054
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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