Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30175
(663 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 90 4e-17
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 89 7e-17
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 89 9e-17
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 83 4e-15
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 81 2e-14
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 81 2e-14
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 81 3e-14
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 80 4e-14
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 79 7e-14
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 78 2e-13
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 78 2e-13
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 77 4e-13
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 77 4e-13
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 76 7e-13
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 74 3e-12
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 73 6e-12
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 73 6e-12
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 73 6e-12
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 71 2e-11
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 71 2e-11
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 71 2e-11
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 71 2e-11
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 71 2e-11
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 71 3e-11
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 70 4e-11
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 69 1e-10
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 69 1e-10
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 66 9e-10
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 66 9e-10
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 66 9e-10
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 66 9e-10
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 65 2e-09
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 65 2e-09
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 64 2e-09
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 64 2e-09
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 62 9e-09
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 58 2e-07
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 56 6e-07
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 56 1e-06
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 55 1e-06
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 55 2e-06
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 55 2e-06
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 54 2e-06
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 50 5e-05
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 50 7e-05
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 49 9e-05
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 49 1e-04
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 49 1e-04
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 49 1e-04
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 46 6e-04
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 46 8e-04
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 45 0.002
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 44 0.004
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 43 0.006
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 43 0.008
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 43 0.008
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 42 0.013
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 42 0.018
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 42 0.018
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 41 0.023
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 41 0.023
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 41 0.031
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 40 0.040
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 40 0.040
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 39 0.12
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 38 0.28
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 38 0.28
UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 37 0.38
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 37 0.38
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 37 0.50
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 36 0.66
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 36 0.87
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 36 0.87
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 36 1.1
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 36 1.1
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 36 1.1
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 35 1.5
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 35 2.0
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 33 4.6
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 33 8.1
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 33 8.1
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 33 8.1
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 33 8.1
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 90.2 bits (214), Expect = 4e-17
Identities = 47/61 (77%), Positives = 50/61 (81%)
Frame = +1
Query: 217 LTPTPLPYIINFKRIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAI 396
L P L +I+ IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAGISSI+GAI
Sbjct: 101 LLPPSLTLLIS-SSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAI 159
Query: 397 N 399
N
Sbjct: 160 N 160
Score = 88.2 bits (209), Expect = 2e-16
Identities = 44/68 (64%), Positives = 48/68 (70%)
Frame = +2
Query: 14 LLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 193
LLIRAELG PGSLIGDDQIYNTIVTAHA N LVPL+LGAPD+AF
Sbjct: 32 LLIRAELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAF 91
Query: 194 PRINNIRF 217
PR+NN+ F
Sbjct: 92 PRMNNMSF 99
Score = 33.9 bits (74), Expect = 3.5
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +2
Query: 590 FLDPAGGGDPHLYPHLIF 643
F DPAGGGDP LY HL +
Sbjct: 216 FFDPAGGGDPILYQHLFW 233
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 89.4 bits (212), Expect = 7e-17
Identities = 47/61 (77%), Positives = 50/61 (81%)
Frame = +1
Query: 217 LTPTPLPYIINFKRIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAI 396
L P L +I+ IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAGISSI+GAI
Sbjct: 77 LLPPSLILLIS-SSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAI 135
Query: 397 N 399
N
Sbjct: 136 N 136
Score = 86.2 bits (204), Expect = 6e-16
Identities = 42/68 (61%), Positives = 47/68 (69%)
Frame = +2
Query: 14 LLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 193
LLIR ELG PGSLIGDDQIYNTIVTAHA N L+PL+LGAPD+AF
Sbjct: 8 LLIRTELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMLGAPDMAF 67
Query: 194 PRINNIRF 217
PR+NN+ F
Sbjct: 68 PRMNNMSF 75
Score = 33.9 bits (74), Expect = 3.5
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +2
Query: 590 FLDPAGGGDPHLYPHLIF 643
F DPAGGGDP LY HL +
Sbjct: 192 FFDPAGGGDPILYQHLFW 209
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 89.0 bits (211), Expect = 9e-17
Identities = 47/79 (59%), Positives = 56/79 (70%)
Frame = -1
Query: 246 NNIREGGRSQNLILFIRGNAISGAPSIRGTNQFPNPPXXXXXXXXXXXXKACAVTIVL*I 67
+ ++EGG +QNL+LFIRGNA+SGAP++ GTNQFPNPP KA AVT+ L I
Sbjct: 123 SKVKEGGSNQNLMLFIRGNAMSGAPNMSGTNQFPNPPIMIGMTMKKIITKAWAVTMTL-I 181
Query: 66 *SSPINDPGFPNSARIKSL 10
S PI PG PNSARIKSL
Sbjct: 182 WSFPIKLPGCPNSARIKSL 200
Score = 65.7 bits (153), Expect = 9e-10
Identities = 32/47 (68%), Positives = 34/47 (72%)
Frame = -2
Query: 392 APIIDEIPAKCSEKIARSTDLPLCAILDESGG*TVHPVPAPFSTILL 252
AP I+E PAKC+EKI STD P CAI SGG TVHPVP P STI L
Sbjct: 74 APKIEETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTPLSTIPL 120
Score = 38.3 bits (85), Expect = 0.16
Identities = 25/47 (53%), Positives = 31/47 (65%)
Frame = -1
Query: 636 KCGYKWGSPPPAGSKKWGYLKVSDLVNNIVNSPQPKTGSDNNKKMAV 496
KC + GSPPPAGSKK + S V +IV +P TGS++N KMAV
Sbjct: 2 KC-WSIGSPPPAGSKKEVFKFRS--VKSIVIAP-ASTGSESNSKMAV 44
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 83.4 bits (197), Expect = 4e-15
Identities = 40/68 (58%), Positives = 47/68 (69%)
Frame = +2
Query: 14 LLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 193
LLIRAELG PG+L+GDDQIYN IVTAHA N LVPL++GAPD+AF
Sbjct: 36 LLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAF 95
Query: 194 PRINNIRF 217
PR+NN+ F
Sbjct: 96 PRMNNMSF 103
Score = 80.2 bits (189), Expect = 4e-14
Identities = 38/46 (82%), Positives = 41/46 (89%)
Frame = +1
Query: 262 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399
VE GAGTG TVYPPL+ N+AH G SVDLAIFSLHLAGISSI+GAIN
Sbjct: 119 VEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGISSILGAIN 164
Score = 33.9 bits (74), Expect = 3.5
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +2
Query: 590 FLDPAGGGDPHLYPHLIF 643
F DPAGGGDP LY HL +
Sbjct: 220 FFDPAGGGDPILYQHLFW 237
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 81.0 bits (191), Expect = 2e-14
Identities = 39/68 (57%), Positives = 46/68 (67%)
Frame = +2
Query: 14 LLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 193
LLIRAEL PG+L+GDDQIYN IVTAHA N LVPL++GAPD+AF
Sbjct: 35 LLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPVMIGGFGNWLVPLMIGAPDMAF 94
Query: 194 PRINNIRF 217
PR+NN+ F
Sbjct: 95 PRMNNMSF 102
Score = 78.2 bits (184), Expect = 2e-13
Identities = 36/46 (78%), Positives = 40/46 (86%)
Frame = +1
Query: 262 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399
VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG+SSI+GAIN
Sbjct: 118 VEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAIN 163
Score = 33.9 bits (74), Expect = 3.5
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +2
Query: 590 FLDPAGGGDPHLYPHLIF 643
F DPAGGGDP LY HL +
Sbjct: 219 FFDPAGGGDPILYQHLFW 236
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 81.0 bits (191), Expect = 2e-14
Identities = 39/68 (57%), Positives = 46/68 (67%)
Frame = +2
Query: 14 LLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 193
LLIRAEL PG+L+GDDQIYN IVTAHA N LVPL++GAPD+AF
Sbjct: 35 LLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPILIGGFGNWLVPLMIGAPDMAF 94
Query: 194 PRINNIRF 217
PR+NN+ F
Sbjct: 95 PRMNNMSF 102
Score = 78.2 bits (184), Expect = 2e-13
Identities = 36/46 (78%), Positives = 40/46 (86%)
Frame = +1
Query: 262 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399
VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG+SSI+GAIN
Sbjct: 118 VEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAIN 163
Score = 33.9 bits (74), Expect = 3.5
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +2
Query: 590 FLDPAGGGDPHLYPHLIF 643
F DPAGGGDP LY HL +
Sbjct: 219 FFDPAGGGDPILYQHLFW 236
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 80.6 bits (190), Expect = 3e-14
Identities = 38/68 (55%), Positives = 46/68 (67%)
Frame = +2
Query: 14 LLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 193
LLIRAEL PG+L+GDDQIYN IVTAHA N L+PL++GAPD+AF
Sbjct: 24 LLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLIPLMIGAPDMAF 83
Query: 194 PRINNIRF 217
PR+NN+ F
Sbjct: 84 PRMNNMSF 91
Score = 78.2 bits (184), Expect = 2e-13
Identities = 36/46 (78%), Positives = 40/46 (86%)
Frame = +1
Query: 262 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399
+E GAGTG TVYPPL+ N+AH G SVDL IFSLHLAGISSI+GAIN
Sbjct: 107 IEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAIN 152
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 80.2 bits (189), Expect = 4e-14
Identities = 38/68 (55%), Positives = 45/68 (66%)
Frame = +2
Query: 14 LLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 193
LLIR ELG PGS IG+DQ+YN +VTAHA N LVPL+LGAPD+AF
Sbjct: 18 LLIRVELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPLMLGAPDMAF 77
Query: 194 PRINNIRF 217
PR+NN+ F
Sbjct: 78 PRLNNMSF 85
Score = 80.2 bits (189), Expect = 4e-14
Identities = 37/46 (80%), Positives = 41/46 (89%)
Frame = +1
Query: 262 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399
VE+GAGTG TVYPPLS N AH G SVDLAIFSLHLAG+SSI+GA+N
Sbjct: 101 VESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHLAGVSSILGAVN 146
Score = 33.9 bits (74), Expect = 3.5
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +2
Query: 590 FLDPAGGGDPHLYPHLIF 643
F DPAGGGDP LY HL +
Sbjct: 202 FFDPAGGGDPILYQHLFW 219
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 79.4 bits (187), Expect = 7e-14
Identities = 38/68 (55%), Positives = 46/68 (67%)
Frame = +2
Query: 14 LLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 193
LLIRAELG PG+L+G+D IYN IVTAHA N LVPL++GAPD+AF
Sbjct: 35 LLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAF 94
Query: 194 PRINNIRF 217
PR+NN+ F
Sbjct: 95 PRMNNMSF 102
Score = 75.8 bits (178), Expect = 9e-13
Identities = 35/47 (74%), Positives = 40/47 (85%)
Frame = +1
Query: 259 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399
+VE GAGTG TVYPPL+ N +H G SVDL IFSLHLAG+SSI+GAIN
Sbjct: 117 MVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAIN 163
Score = 33.9 bits (74), Expect = 3.5
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +2
Query: 590 FLDPAGGGDPHLYPHLIF 643
F DPAGGGDP LY HL +
Sbjct: 219 FFDPAGGGDPILYQHLFW 236
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 78.2 bits (184), Expect = 2e-13
Identities = 40/68 (58%), Positives = 47/68 (69%)
Frame = +2
Query: 14 LLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 193
LLIRAELG PG+L+GDDQ N IVTAHA N LVPL++GAPD+AF
Sbjct: 36 LLIRAELGQPGTLLGDDQXXNVIVTAHAFVMIFXMXMPIMIGGFGNWLVPLMIGAPDMAF 95
Query: 194 PRINNIRF 217
PR+NN+ F
Sbjct: 96 PRMNNMSF 103
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 77.8 bits (183), Expect = 2e-13
Identities = 36/68 (52%), Positives = 44/68 (64%)
Frame = +2
Query: 14 LLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 193
L+IR ELG PGSL+ DDQ+YN +VTAH N LVPL+LGAPD+AF
Sbjct: 19 LMIRTELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAF 78
Query: 194 PRINNIRF 217
PR+NN+ F
Sbjct: 79 PRMNNMSF 86
Score = 38.3 bits (85), Expect = 0.16
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = +1
Query: 328 GRSVDLAIFSLHLAGISSIIGA 393
G SVDLAIF LHLAG+SSI+G+
Sbjct: 122 GPSVDLAIFPLHLAGVSSILGS 143
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 77.0 bits (181), Expect = 4e-13
Identities = 36/46 (78%), Positives = 40/46 (86%)
Frame = +1
Query: 262 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399
VE GAGTG TV PPLS+NIAH G SVDLAIFSLH+AG+ SI+GAIN
Sbjct: 37 VEKGAGTGWTVSPPLSANIAHEGSSVDLAIFSLHMAGVXSILGAIN 82
Score = 33.9 bits (74), Expect = 3.5
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +2
Query: 590 FLDPAGGGDPHLYPHLIF 643
F DPAGGGDP LY HL +
Sbjct: 138 FFDPAGGGDPILYQHLFW 155
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 77.0 bits (181), Expect = 4e-13
Identities = 36/68 (52%), Positives = 47/68 (69%)
Frame = +2
Query: 14 LLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 193
L+IR ELG PGSLIG+DQIYN+IVT+HA N L+PL+LG+PD++F
Sbjct: 19 LIIRLELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPLMLGSPDMSF 78
Query: 194 PRINNIRF 217
PR+NN+ F
Sbjct: 79 PRMNNMSF 86
Score = 68.1 bits (159), Expect = 2e-10
Identities = 36/67 (53%), Positives = 45/67 (67%)
Frame = +1
Query: 199 NK*YKILTPTPLPYIINFKRIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 378
N + +L P+ L I++ + G GTG TVYPPLS + H G SVDL IFSLHLAG S
Sbjct: 83 NMSFWLLIPSLLLLILSM--FINVGVGTGWTVYPPLSLILGHGGMSVDLGIFSLHLAGAS 140
Query: 379 SIIGAIN 399
SI+GA+N
Sbjct: 141 SIMGAVN 147
Score = 32.7 bits (71), Expect = 8.1
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +2
Query: 590 FLDPAGGGDPHLYPHLIF 643
F DP+GGGDP LY HL +
Sbjct: 203 FFDPSGGGDPILYQHLFW 220
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 76.2 bits (179), Expect = 7e-13
Identities = 35/68 (51%), Positives = 44/68 (64%)
Frame = +2
Query: 14 LLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 193
+LIR EL +PGS++GDD +YN IVTAHA N VPL++GAPD+AF
Sbjct: 36 MLIRLELSSPGSMLGDDHLYNVIVTAHAFVMIFFLVMPTMIGGFGNWFVPLMIGAPDMAF 95
Query: 194 PRINNIRF 217
PR+NNI F
Sbjct: 96 PRLNNISF 103
Score = 75.8 bits (178), Expect = 9e-13
Identities = 36/57 (63%), Positives = 45/57 (78%)
Frame = +1
Query: 229 PLPYIINFKRIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399
P +++ +VE GAGTG TVYPPL+S AH G SVD+AIFSLHLAG+SSI+GA+N
Sbjct: 108 PALFLLLGSSLVEQGAGTGWTVYPPLASIQAHSGGSVDMAIFSLHLAGLSSILGAMN 164
Score = 33.9 bits (74), Expect = 3.5
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +2
Query: 590 FLDPAGGGDPHLYPHLIF 643
F DPAGGGDP LY HL +
Sbjct: 220 FFDPAGGGDPILYQHLFW 237
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 74.1 bits (174), Expect = 3e-12
Identities = 36/47 (76%), Positives = 40/47 (85%)
Frame = +1
Query: 259 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399
+VE+GAGTG TVYPPLSS AH G SVDLAIFSLHL ISS++GAIN
Sbjct: 118 LVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFSLHLTSISSLLGAIN 164
Score = 52.8 bits (121), Expect = 7e-06
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Frame = +2
Query: 14 LLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 187
++IR EL PGS L G+ Q++N +V HA N ++PL++GA D+
Sbjct: 34 MIIRMELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLAMPALIGGFGNYMLPLMIGATDM 93
Query: 188 AFPRINNIRF 217
+FPRIN+I F
Sbjct: 94 SFPRINSIGF 103
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 72.9 bits (171), Expect = 6e-12
Identities = 43/88 (48%), Positives = 51/88 (57%)
Frame = +1
Query: 136 WRIWKLXXXXXXXXXXXXXPTNK*YKILTPTPLPYIINFKRIVENGAGTG*TVYPPLSSN 315
W IWKL P NK YKILT PL Y KR N + PL+S+
Sbjct: 28 WWIWKLINSANVSGPWYGFPANKQYKILTSAPLTYTPINKR---NSS--------PLASS 76
Query: 316 IAHRGRSVDLAIFSLHLAGISSIIGAIN 399
IAH G SVD+AIFSLHLAG+SSI+G++N
Sbjct: 77 IAHAGASVDMAIFSLHLAGVSSILGSVN 104
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 72.9 bits (171), Expect = 6e-12
Identities = 35/47 (74%), Positives = 40/47 (85%)
Frame = +1
Query: 259 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399
+VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL ISS++GAIN
Sbjct: 118 LVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAIN 164
Score = 57.2 bits (132), Expect = 3e-07
Identities = 31/70 (44%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Frame = +2
Query: 14 LLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 187
L+IR EL PGS L G+ Q++N +V HA N L+PL++GA D
Sbjct: 34 LIIRLELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGATDT 93
Query: 188 AFPRINNIRF 217
AFPRINNI F
Sbjct: 94 AFPRINNIAF 103
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 72.9 bits (171), Expect = 6e-12
Identities = 35/47 (74%), Positives = 40/47 (85%)
Frame = +1
Query: 259 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399
+VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL ISS++GAIN
Sbjct: 118 LVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAIN 164
Score = 57.2 bits (132), Expect = 3e-07
Identities = 31/70 (44%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Frame = +2
Query: 14 LLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 187
L+IR EL PGS L G+ Q++N +V HA N L+PL++GA D
Sbjct: 34 LIIRLELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGATDT 93
Query: 188 AFPRINNIRF 217
AFPRINNI F
Sbjct: 94 AFPRINNIAF 103
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 71.3 bits (167), Expect = 2e-11
Identities = 34/46 (73%), Positives = 39/46 (84%)
Frame = +1
Query: 262 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399
VE GAGTG TVYPPLS +H G SVDLAIFSLHL+GISS++GA+N
Sbjct: 118 VEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMN 163
Score = 64.9 bits (151), Expect = 2e-09
Identities = 34/70 (48%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Frame = +2
Query: 14 LLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 187
+LIR EL PG L GD Q+YN I+TAHA N LVP+++GAPD+
Sbjct: 33 VLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDM 92
Query: 188 AFPRINNIRF 217
AFPR+NNI F
Sbjct: 93 AFPRLNNISF 102
Score = 33.5 bits (73), Expect = 4.6
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +2
Query: 590 FLDPAGGGDPHLYPHLIF 643
F DPAGGGDP LY HL +
Sbjct: 219 FYDPAGGGDPILYQHLFW 236
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 71.3 bits (167), Expect = 2e-11
Identities = 34/46 (73%), Positives = 39/46 (84%)
Frame = +1
Query: 262 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399
VE GAGTG TVYPPLS +H G SVDLAIFSLHL+GISS++GA+N
Sbjct: 118 VEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMN 163
Score = 64.9 bits (151), Expect = 2e-09
Identities = 34/70 (48%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Frame = +2
Query: 14 LLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 187
+LIR EL PG L GD Q+YN I+TAHA N LVP+++GAPD+
Sbjct: 33 VLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDM 92
Query: 188 AFPRINNIRF 217
AFPR+NNI F
Sbjct: 93 AFPRLNNISF 102
Score = 33.1 bits (72), Expect = 6.1
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = +2
Query: 590 FLDPAGGGDPHLYPHL 637
F DPAGGGDP LY HL
Sbjct: 219 FYDPAGGGDPILYQHL 234
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 71.3 bits (167), Expect = 2e-11
Identities = 34/46 (73%), Positives = 39/46 (84%)
Frame = +1
Query: 262 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399
VE GAGTG TVYPPLS +H G SVDLAIFSLHL+GISS++GA+N
Sbjct: 118 VEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMN 163
Score = 64.9 bits (151), Expect = 2e-09
Identities = 34/70 (48%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Frame = +2
Query: 14 LLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 187
+LIR EL PG L GD Q+YN I+TAHA N LVP+++GAPD+
Sbjct: 33 VLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDM 92
Query: 188 AFPRINNIRF 217
AFPR+NNI F
Sbjct: 93 AFPRLNNISF 102
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 70.9 bits (166), Expect = 2e-11
Identities = 33/47 (70%), Positives = 40/47 (85%)
Frame = +1
Query: 259 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399
+VE+GAGTG TVYPPL+S AH G SVDLAIF+LH+ ISS++GAIN
Sbjct: 118 LVESGAGTGWTVYPPLASIQAHSGPSVDLAIFALHMTSISSLLGAIN 164
Score = 54.8 bits (126), Expect = 2e-06
Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Frame = +2
Query: 14 LLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 187
L+IR EL PG L G++Q++N +V HA N ++PL++GA D
Sbjct: 34 LIIRLELAAPGQQYLHGNNQLFNVLVVGHAILMIFFMVMPALIGGFGNYMLPLMIGATDT 93
Query: 188 AFPRINNIRF 217
AFPRINNI F
Sbjct: 94 AFPRINNIGF 103
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 70.9 bits (166), Expect = 2e-11
Identities = 35/64 (54%), Positives = 47/64 (73%)
Frame = +1
Query: 208 YKILTPTPLPYIINFKRIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSII 387
Y +L P+ + ++ F +ENG GTG T+YPPLS +H G SVDLAIF LHL+GISS++
Sbjct: 103 YLLLIPSIVLFL--FAGGIENGVGTGWTLYPPLSGIQSHSGPSVDLAIFGLHLSGISSLL 160
Query: 388 GAIN 399
GA+N
Sbjct: 161 GAMN 164
Score = 61.3 bits (142), Expect = 2e-08
Identities = 31/69 (44%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Frame = +2
Query: 14 LLIRAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIA 190
+LIR EL PG I D+Q+YN+I+TAHA N L+PL LG PD+
Sbjct: 35 VLIRLELSGPGVQYIADNQLYNSIITAHAIIMIFFMVMPALIGGFGNFLLPLGLGGPDMG 94
Query: 191 FPRINNIRF 217
FPR+NNI +
Sbjct: 95 FPRLNNISY 103
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 70.5 bits (165), Expect = 3e-11
Identities = 35/61 (57%), Positives = 46/61 (75%)
Frame = +1
Query: 217 LTPTPLPYIINFKRIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAI 396
L P L +++ +VE G+GTG TVYPPLS +H G +VDLAIFSLHL+G+SSI+G+I
Sbjct: 107 LLPPSLLLLLS-SALVEVGSGTGWTVYPPLSGITSHSGGAVDLAIFSLHLSGVSSILGSI 165
Query: 397 N 399
N
Sbjct: 166 N 166
Score = 63.3 bits (147), Expect = 5e-09
Identities = 31/70 (44%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Frame = +2
Query: 14 LLIRAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 187
+LIR EL PG I G+ Q+YN ++TAHA N VP+++GAPD+
Sbjct: 36 VLIRMELARPGDQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGFGNWFVPILIGAPDM 95
Query: 188 AFPRINNIRF 217
AFPR+NNI F
Sbjct: 96 AFPRLNNISF 105
Score = 33.9 bits (74), Expect = 3.5
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +2
Query: 590 FLDPAGGGDPHLYPHLIF 643
F DPAGGGDP LY HL +
Sbjct: 222 FFDPAGGGDPILYQHLFW 239
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 70.1 bits (164), Expect = 4e-11
Identities = 32/57 (56%), Positives = 40/57 (70%)
Frame = +1
Query: 229 PLPYIINFKRIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399
P ++ F I+ENG GTG T+YPPLS +H VDL IF LHL+GISS++GAIN
Sbjct: 134 PSLFLFVFAAIIENGVGTGWTLYPPLSGIQSHSSMGVDLGIFGLHLSGISSLLGAIN 190
Score = 59.7 bits (138), Expect = 6e-08
Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = +2
Query: 14 LLIRAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIA 190
+LIR EL PG I D+Q+YN+I+T+H N L+P+++G PD+A
Sbjct: 61 VLIRLELSGPGIQYIEDNQLYNSIITSHGVIMIFFMVMPALIGGFGNFLLPILIGGPDMA 120
Query: 191 FPRINNIRF 217
FPR+NN+ +
Sbjct: 121 FPRLNNVSY 129
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 68.9 bits (161), Expect = 1e-10
Identities = 32/47 (68%), Positives = 39/47 (82%)
Frame = +1
Query: 259 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399
+VE G GTG TVYPPLSS +H G +VDLAIFSLH++G SSI+GA+N
Sbjct: 125 LVEVGVGTGWTVYPPLSSIQSHSGGAVDLAIFSLHISGASSILGAVN 171
Score = 65.3 bits (152), Expect = 1e-09
Identities = 32/74 (43%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Frame = +2
Query: 2 GTRRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 175
G +LIR EL P + L+G+ QIYN ++TAHA N LVP+++G
Sbjct: 37 GCMSMLIRMELAQPSNHLLLGNHQIYNVLITAHAFLMIFFMVMPVMIGGFGNWLVPIMIG 96
Query: 176 APDIAFPRINNIRF 217
+PD+AFPR+NNI F
Sbjct: 97 SPDMAFPRLNNISF 110
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 68.5 bits (160), Expect = 1e-10
Identities = 35/58 (60%), Positives = 43/58 (74%)
Frame = +1
Query: 223 PTPLPYIINFKRIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAI 396
P+ L Y+I+ +VE G G G TVYPPL+S + H G SVD AIFSLHLAG SSI+GA+
Sbjct: 2 PSLLLYVIS--SMVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASSIMGAM 57
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 65.7 bits (153), Expect = 9e-10
Identities = 30/64 (46%), Positives = 48/64 (75%)
Frame = +1
Query: 208 YKILTPTPLPYIINFKRIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSII 387
+ +L P+ L +++ +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SSI
Sbjct: 120 FVVLLPSMLFAVLSC--LIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIF 177
Query: 388 GAIN 399
GAIN
Sbjct: 178 GAIN 181
Score = 51.2 bits (117), Expect = 2e-05
Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Frame = +2
Query: 14 LLIRAELG--NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 187
+L+R EL NP L+ + Q++N ++TAHA N LVPL +G+ D
Sbjct: 51 VLMRIELSSPNPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDT 110
Query: 188 AFPRINNIRF 217
AFPRINN+ F
Sbjct: 111 AFPRINNLAF 120
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 65.7 bits (153), Expect = 9e-10
Identities = 30/64 (46%), Positives = 48/64 (75%)
Frame = +1
Query: 208 YKILTPTPLPYIINFKRIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSII 387
+ +L P+ L +++ +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SSI
Sbjct: 120 FVVLLPSMLFAVLSC--LIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIF 177
Query: 388 GAIN 399
GAIN
Sbjct: 178 GAIN 181
Score = 51.2 bits (117), Expect = 2e-05
Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Frame = +2
Query: 14 LLIRAELG--NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 187
+L+R EL NP L+ + Q++N ++TAHA N LVPL +G+ D
Sbjct: 51 VLMRIELSSPNPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDT 110
Query: 188 AFPRINNIRF 217
AFPRINN+ F
Sbjct: 111 AFPRINNLAF 120
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 65.7 bits (153), Expect = 9e-10
Identities = 30/64 (46%), Positives = 48/64 (75%)
Frame = +1
Query: 208 YKILTPTPLPYIINFKRIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSII 387
+ +L P+ L +++ +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SSI
Sbjct: 120 FVVLLPSMLFAVLSC--LIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIF 177
Query: 388 GAIN 399
GAIN
Sbjct: 178 GAIN 181
Score = 51.2 bits (117), Expect = 2e-05
Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Frame = +2
Query: 14 LLIRAELG--NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 187
+L+R EL NP L+ + Q++N ++TAHA N LVPL +G+ D
Sbjct: 51 VLMRIELSSPNPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDT 110
Query: 188 AFPRINNIRF 217
AFPRINN+ F
Sbjct: 111 AFPRINNLAF 120
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 65.7 bits (153), Expect = 9e-10
Identities = 30/64 (46%), Positives = 48/64 (75%)
Frame = +1
Query: 208 YKILTPTPLPYIINFKRIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSII 387
+ +L P+ L +++ +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SSI
Sbjct: 120 FVVLLPSMLFAVLSC--LIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIF 177
Query: 388 GAIN 399
GAIN
Sbjct: 178 GAIN 181
Score = 51.2 bits (117), Expect = 2e-05
Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Frame = +2
Query: 14 LLIRAELG--NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 187
+L+R EL NP L+ + Q++N ++TAHA N LVPL +G+ D
Sbjct: 51 VLMRIELSSPNPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDT 110
Query: 188 AFPRINNIRF 217
AFPRINN+ F
Sbjct: 111 AFPRINNLAF 120
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 64.9 bits (151), Expect = 2e-09
Identities = 33/57 (57%), Positives = 41/57 (71%)
Frame = +1
Query: 229 PLPYIINFKRIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399
P +I +VE GAGTG TVY PL+ +H G +VDLAIFSLHL+G SS++GAIN
Sbjct: 113 PSLILILTSALVEAGAGTGWTVYFPLAGIQSHSGPAVDLAIFSLHLSGFSSLLGAIN 169
Score = 55.2 bits (127), Expect = 1e-06
Identities = 30/69 (43%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Frame = +2
Query: 17 LIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIA 190
+IR EL N GS L G+ Q +N ++TAHA N L+PL+LGA D+A
Sbjct: 40 IIRLELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLMPLMLGASDMA 99
Query: 191 FPRINNIRF 217
F R+NNI F
Sbjct: 100 FARLNNISF 108
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 64.9 bits (151), Expect = 2e-09
Identities = 34/70 (48%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Frame = +2
Query: 14 LLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 187
+LIR EL PG L GD Q+YN I+TAHA N LVP+++GAPD+
Sbjct: 33 VLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDM 92
Query: 188 AFPRINNIRF 217
AFPR+NNI F
Sbjct: 93 AFPRLNNISF 102
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 64.5 bits (150), Expect = 2e-09
Identities = 31/45 (68%), Positives = 33/45 (73%)
Frame = +1
Query: 265 ENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399
E G GTG TVYPPLSS +H G SVDL IFS HL GI SI+ AIN
Sbjct: 123 EGGPGTGWTVYPPLSSLQSHSGASVDLMIFSFHLVGIGSIVAAIN 167
Score = 52.0 bits (119), Expect = 1e-05
Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = +2
Query: 14 LLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 187
+L+R EL PG L G+ YN I T H N VP+++GAPD+
Sbjct: 37 MLMRLELAFPGDQILFGEYHFYNMITTVHGVLMLFVVVMPILFGGFGNYFVPILIGAPDM 96
Query: 188 AFPRINNIRF 217
+FPR+NN F
Sbjct: 97 SFPRLNNFSF 106
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 64.5 bits (150), Expect = 2e-09
Identities = 32/61 (52%), Positives = 43/61 (70%), Gaps = 4/61 (6%)
Frame = +1
Query: 229 PLPYIINFKRIVENGAGTG*TV----YPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAI 396
P ++ F I+E G GTG T+ YPPLS +H G SVDLAIF+LHL+G+SS++G+I
Sbjct: 136 PSLLLLVFSAIIEGGVGTGWTLLKDKYPPLSGLQSHSGPSVDLAIFALHLSGVSSLLGSI 195
Query: 397 N 399
N
Sbjct: 196 N 196
Score = 63.7 bits (148), Expect = 4e-09
Identities = 31/69 (44%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = +2
Query: 14 LLIRAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIA 190
+LIR EL PG I ++Q+YN+I+TAHA N L+PL++G PD+A
Sbjct: 63 VLIRLELSGPGVQFIANNQLYNSIITAHAILMIFFMVMPALIGGFGNFLMPLMIGGPDMA 122
Query: 191 FPRINNIRF 217
FPR+NNI F
Sbjct: 123 FPRLNNISF 131
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 62.5 bits (145), Expect = 9e-09
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Frame = +2
Query: 14 LLIRAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 187
+LIR EL PG+ I G+ Q+YN ++TAHA N VP+++G+PD+
Sbjct: 37 VLIRMELAQPGNQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGFGNWFVPILIGSPDM 96
Query: 188 AFPRINNIRF 217
AFPR+NNI F
Sbjct: 97 AFPRLNNISF 106
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 58.0 bits (134), Expect = 2e-07
Identities = 29/44 (65%), Positives = 35/44 (79%)
Frame = +1
Query: 268 NGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399
NGAGTG TVY PLS++ G +VD+AI SLH+AG SSI+GAIN
Sbjct: 164 NGAGTGWTVYAPLSTS-GSAGPAVDMAILSLHIAGASSILGAIN 206
Score = 44.8 bits (101), Expect = 0.002
Identities = 19/50 (38%), Positives = 28/50 (56%)
Frame = +2
Query: 68 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 217
++N ++TAH N VP+++GAPD+AFPR+NNI F
Sbjct: 93 LWNVLITAHGLIMVFFMVMPAMIGGFGNWFVPIMIGAPDMAFPRMNNISF 142
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 56.4 bits (130), Expect = 6e-07
Identities = 28/47 (59%), Positives = 34/47 (72%)
Frame = +1
Query: 217 LTPTPLPYIINFKRIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFS 357
+ P L +++ +VENGAGTG TVYPPLSS AH G SVDLAI+S
Sbjct: 20 MLPPSLTLLLS-SSMVENGAGTGWTVYPPLSSGTAHAGASVDLAIYS 65
Score = 33.9 bits (74), Expect = 3.5
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +2
Query: 164 LILGAPDIAFPRINNIRF 217
L+LGAPD+AFPR+NN+ F
Sbjct: 1 LMLGAPDMAFPRMNNMSF 18
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 55.6 bits (128), Expect = 1e-06
Identities = 23/47 (48%), Positives = 35/47 (74%)
Frame = +1
Query: 259 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399
+++ GAG G T YPP+S+ R+VD AIF++H++G SSI+G+IN
Sbjct: 223 MIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVSGASSILGSIN 269
Score = 44.4 bits (100), Expect = 0.002
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +2
Query: 23 RAELGNPGSLIG--DDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFP 196
+A LG L G D ++N ++T H N +PL++GAPD+AFP
Sbjct: 142 QALLGTMDQLDGNPDGHLWNVLITGHGVLMMFFVVIPALFGGFGNYFMPLMIGAPDMAFP 201
Query: 197 RINNIRF 217
R+NN+ +
Sbjct: 202 RLNNLSY 208
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 55.2 bits (127), Expect = 1e-06
Identities = 30/69 (43%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Frame = +2
Query: 17 LIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIA 190
+IR EL N GS L G+ Q +N ++TAHA N L+PL+LGA D+A
Sbjct: 40 IIRLELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLMPLMLGASDMA 99
Query: 191 FPRINNIRF 217
F R+NNI F
Sbjct: 100 FARLNNISF 108
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 54.8 bits (126), Expect = 2e-06
Identities = 25/43 (58%), Positives = 33/43 (76%)
Frame = +1
Query: 271 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399
G G G T+YPPLS++ G +DLA+FSLH+AG+SSI G+IN
Sbjct: 123 GLGCGWTMYPPLSNSEFMDGLPIDLAVFSLHMAGMSSIAGSIN 165
Score = 39.1 bits (87), Expect = 0.093
Identities = 18/64 (28%), Positives = 32/64 (50%)
Frame = +2
Query: 20 IRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 199
+R EL +PG + +Y++I+T HA N +PL++ D++ PR
Sbjct: 39 MRIELSHPGEWLQVGYMYHSIMTMHAFMMIFFFVMPTSIGGLGNWFIPLMIKIKDLSMPR 98
Query: 200 INNI 211
+NN+
Sbjct: 99 LNNL 102
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 54.8 bits (126), Expect = 2e-06
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Frame = +2
Query: 14 LLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 187
+LIR EL +PG G Q+YN+++T H N ++PL+LGAP++
Sbjct: 44 MLIRFELSSPGGHLFFGSGQVYNSVLTMHGVLMIFFLVMPILIGGFGNWMLPLMLGAPEM 103
Query: 188 AFPRINNIRF 217
AFPR+N + F
Sbjct: 104 AFPRVNALSF 113
Score = 38.3 bits (85), Expect = 0.16
Identities = 20/46 (43%), Positives = 25/46 (54%)
Frame = +1
Query: 262 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399
+ G G+ T YPPLS S+D I LH GI S++GAIN
Sbjct: 129 IGGGPGSSWTFYPPLSVE-GQPELSLDTMILGLHTVGIGSLLGAIN 173
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 54.4 bits (125), Expect = 2e-06
Identities = 25/43 (58%), Positives = 30/43 (69%)
Frame = +1
Query: 271 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399
G G VYPP SS +AH +VDL IF LHLAGISS +G++N
Sbjct: 111 GVGXXWXVYPPXSSGLAHSSGAVDLGIFXLHLAGISSXLGSMN 153
Score = 35.5 bits (78), Expect = 1.1
Identities = 24/68 (35%), Positives = 29/68 (42%)
Frame = +2
Query: 14 LLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 193
L R L G +IG QI VTA A L PL +GAP +A
Sbjct: 25 LXXRXXLSXXGQVIGXGQIXXVGVTAXALVMIFFFVMPTLXGGFGXXLXPLXVGAPXMAX 84
Query: 194 PRINNIRF 217
PR+ N+ F
Sbjct: 85 PRLXNMSF 92
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 50.0 bits (114), Expect = 5e-05
Identities = 26/72 (36%), Positives = 39/72 (54%)
Frame = +2
Query: 2 GTRRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAP 181
G +L+R EL +PG + + YN+++T+H N L+PL++GA
Sbjct: 113 GLMVVLMRIELADPGMTVISNTFYNSLLTSHGITMLFLFATPIIAAFS-NYLIPLLIGAD 171
Query: 182 DIAFPRINNIRF 217
D+AFPRIN I F
Sbjct: 172 DMAFPRINAIAF 183
Score = 36.3 bits (80), Expect = 0.66
Identities = 22/47 (46%), Positives = 30/47 (63%), Gaps = 5/47 (10%)
Frame = +1
Query: 274 AGTG*TVYPPLS-----SNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399
A TG T+Y PLS N A+ G VDL + LHL+G+S+ +G+IN
Sbjct: 206 AQTGWTMYTPLSVGEGMGNQANAG--VDLMLLGLHLSGVSATMGSIN 250
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 49.6 bits (113), Expect = 7e-05
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Frame = +2
Query: 14 LLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 187
++IR EL PG+ L G+ Q++N +V HA N L+PL++GA D+
Sbjct: 34 VIIRLELAAPGNQYLGGNHQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGASDM 93
Query: 188 AFPRINNIRF 217
+F R+NNI F
Sbjct: 94 SFARLNNISF 103
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 49.2 bits (112), Expect = 9e-05
Identities = 27/68 (39%), Positives = 32/68 (47%)
Frame = +2
Query: 2 GTRRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAP 181
G LLIR EL PG I D YN T H N ++PL+LGA
Sbjct: 61 GIFALLIRVELLTPGPTIMDAMTYNRTFTLHGLVMIFLFMIPAIPAVFGNFMLPLMLGAK 120
Query: 182 DIAFPRIN 205
D+AFPR+N
Sbjct: 121 DVAFPRLN 128
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 48.8 bits (111), Expect = 1e-04
Identities = 25/68 (36%), Positives = 34/68 (50%)
Frame = +2
Query: 14 LLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 193
LLIR EL PG I D YN + T H N L+P+++GA D+AF
Sbjct: 58 LLIRLELLTPGPTIMDAMTYNRMFTLHGVVMIFLFMIPAIPSGFGNFLLPIMIGAKDVAF 117
Query: 194 PRINNIRF 217
P++N + F
Sbjct: 118 PKLNLLSF 125
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 48.8 bits (111), Expect = 1e-04
Identities = 26/56 (46%), Positives = 35/56 (62%)
Frame = +1
Query: 232 LPYIINFKRIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399
+P I + + G G G T+YPPLS G VD +FSLHLAG+SS+IG++N
Sbjct: 204 VPSIFYMELSLYYGCGIGWTLYPPLSI-WEGSGFGVDYLMFSLHLAGVSSLIGSVN 258
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 48.8 bits (111), Expect = 1e-04
Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +2
Query: 14 LLIRAELG--NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 187
L IR EL G L GD Q YN ++T+H N +P++ G PD+
Sbjct: 36 LFIRLELSLIGCGILFGDYQFYNVLITSHGLIMVFAFIMPVMMGGLVNYFIPVMAGFPDM 95
Query: 188 AFPRINNIRF 217
FPR+NN+ F
Sbjct: 96 VFPRLNNMSF 105
Score = 43.6 bits (98), Expect = 0.004
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = +1
Query: 259 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399
+ E G G G T+YP L H + D +F++HL GISSI+ +IN
Sbjct: 120 LTEEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHLLGISSILNSIN 166
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 46.4 bits (105), Expect = 6e-04
Identities = 23/58 (39%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = +1
Query: 229 PLPYIINFKRI-VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399
P+ +++ I +E G+GTG T+YPPLS+++++ G +D IF L AGI+S + ++N
Sbjct: 114 PIGFVLVVSSIYLEIGSGTGWTLYPPLSTSLSNVG--IDFIIFGLLAAGIASTLSSVN 169
Score = 34.7 bits (76), Expect = 2.0
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = +2
Query: 14 LLIRAELGNPG-SLIGDD--QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPD 184
+LIR EL G +I D +IYN + T H N L P++LG D
Sbjct: 40 VLIRTELSMSGLKIITMDTLEIYNLLFTLHGLIMVFFNIMTGLFGGIGNYLYPVLLGYCD 99
Query: 185 IAFPRIN 205
+ +PR+N
Sbjct: 100 VVYPRVN 106
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 46.0 bits (104), Expect = 8e-04
Identities = 25/69 (36%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +2
Query: 2 GTRRLLIRAELGNPGSLIGDD-QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGA 178
G +LIR EL G I DD +YNT + H N +PL++GA
Sbjct: 33 GIMAMLIRLELSQIGPTITDDPSVYNTWLYFHGAAMILAFQIPALTGFFANYFIPLMIGA 92
Query: 179 PDIAFPRIN 205
D+AFPR+N
Sbjct: 93 KDVAFPRVN 101
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 44.8 bits (101), Expect = 0.002
Identities = 26/72 (36%), Positives = 35/72 (48%)
Frame = +2
Query: 2 GTRRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAP 181
G LLIRAEL PG ++ +N + T H N ++PL +GAP
Sbjct: 57 GLMALLIRAELFTPGLQFLSNEQFNQLFTMHGTVMLLLYGTPIVWGFA-NYVLPLQIGAP 115
Query: 182 DIAFPRINNIRF 217
D+AFPR+N F
Sbjct: 116 DVAFPRLNAFGF 127
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 43.6 bits (98), Expect = 0.004
Identities = 24/68 (35%), Positives = 32/68 (47%)
Frame = +2
Query: 2 GTRRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAP 181
G LLIR +L P + + YN I+T H N +VPL+LGA
Sbjct: 43 GVFSLLIRTQLAVPNNQFLTGEQYNQILTLHGATMLFFFIIQAGLTGFGNFVVPLMLGAR 102
Query: 182 DIAFPRIN 205
D+A PR+N
Sbjct: 103 DVALPRVN 110
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 43.2 bits (97), Expect = 0.006
Identities = 25/72 (34%), Positives = 34/72 (47%)
Frame = +2
Query: 2 GTRRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAP 181
G L++RA+L P + D YN I T H N +VPL +GA
Sbjct: 72 GVDGLMMRAQLALPNNSFLDSNHYNEIFTTHGTIMIIFMAMPFLIGLI-NVVVPLQIGAR 130
Query: 182 DIAFPRINNIRF 217
D+AFP +NN+ F
Sbjct: 131 DVAFPYLNNLSF 142
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 42.7 bits (96), Expect = 0.008
Identities = 22/72 (30%), Positives = 35/72 (48%)
Frame = +2
Query: 2 GTRRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAP 181
G +++R EL P + + D +YN + T H N L+P ++GAP
Sbjct: 55 GLLAMIVRGELITPPADLVDPSVYNGLYTMHGTVMLFLFLFPILNGFN-NLLIPTMIGAP 113
Query: 182 DIAFPRINNIRF 217
D+AFP++N F
Sbjct: 114 DMAFPKLNAAAF 125
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 42.7 bits (96), Expect = 0.008
Identities = 21/59 (35%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Frame = +1
Query: 229 PLPYI-INFKRIVENGAGTG*TVYPPLSSNIAHRGR-SVDLAIFSLHLAGISSIIGAIN 399
P+ ++ + E G GTG T+YPPLS+++ +VD+ IF L ++G++SI+ ++N
Sbjct: 111 PIAFVLVILSTAAEFGGGTGWTLYPPLSTSLMSLSPVAVDVIIFGLLVSGVASIMSSLN 169
Score = 35.1 bits (77), Expect = 1.5
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +2
Query: 68 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNI 211
+YN I T H N +P++ G+P++A+PRIN+I
Sbjct: 58 LYNMIFTIHGIIMIFFNIMPGLFGGFGNYFLPILCGSPELAYPRINSI 105
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 41.9 bits (94), Expect = 0.013
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +2
Query: 17 LIRAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIA 190
+IR EL +P S GD Y +VTAH N L+P +G+ D+A
Sbjct: 84 MIRMELAHPESPFFKGDSLRYLQVVTAHGLIMVFFVVVPILFGGFANFLIPYHVGSKDVA 143
Query: 191 FPRINNIRF 217
+PR+N+I F
Sbjct: 144 YPRLNSIGF 152
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 41.5 bits (93), Expect = 0.018
Identities = 23/68 (33%), Positives = 33/68 (48%)
Frame = +2
Query: 2 GTRRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAP 181
G LL+R +LG P + +YN + T H N +VPL++GA
Sbjct: 50 GIEALLMRIQLGVPDNTFLTPDVYNQMFTMHGTTMIFLGLMPLNVGLG-NYMVPLMIGAR 108
Query: 182 DIAFPRIN 205
D+AFPR+N
Sbjct: 109 DMAFPRLN 116
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 41.5 bits (93), Expect = 0.018
Identities = 22/42 (52%), Positives = 28/42 (66%)
Frame = +1
Query: 274 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399
A G T YPPLSS SV+ ++FSLHLAGI+S+I + N
Sbjct: 112 ASAGWTFYPPLSS----LSPSVEFSVFSLHLAGIASLISSCN 149
Score = 38.3 bits (85), Expect = 0.16
Identities = 22/68 (32%), Positives = 28/68 (41%)
Frame = +2
Query: 14 LLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 193
LL R +L P L D +YN VT H N L+P PD+ F
Sbjct: 32 LLFRLQLAFPSILTSD--VYNAFVTLHGLVMVFFAAMPTAIGFFANLLIPYHCNLPDLLF 89
Query: 194 PRINNIRF 217
PR+N + F
Sbjct: 90 PRMNALSF 97
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 41.1 bits (92), Expect = 0.023
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +2
Query: 41 PGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 205
PG + D + YN ++T H N L+PL++GA D+AFPR+N
Sbjct: 2 PGMQVVDFKTYNYLLTGHGVGMLFWWAIAAHIGGFGNFLLPLMIGAKDVAFPRLN 56
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 41.1 bits (92), Expect = 0.023
Identities = 19/41 (46%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Frame = +1
Query: 280 TG*TVYPPLSSNIAHR-GRSVDLAIFSLHLAGISSIIGAIN 399
+G T+YPPLS+ A G ++DL++ +H+ GISS IG++N
Sbjct: 135 SGWTLYPPLSTRDADNIGVNIDLSLLVVHVLGISSTIGSVN 175
Score = 36.3 bits (80), Expect = 0.66
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
Frame = +2
Query: 14 LLIRAELGNPGSLI----GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAP 181
+LIR EL G I + IYN +T H N L+P+++G
Sbjct: 41 MLIRMELNTQGLAIVRKVKEVTIYNNWITIHGLIMLFVFIMPVGIGFYGNYLIPMLIGTS 100
Query: 182 DIAFPRINNIRF 217
+++ PR+N I F
Sbjct: 101 ELSMPRMNGISF 112
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 40.7 bits (91), Expect = 0.031
Identities = 23/72 (31%), Positives = 33/72 (45%)
Frame = +2
Query: 2 GTRRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAP 181
G LL+R EL + +YN ++T+H N +PL++ A
Sbjct: 87 GVSVLLMRTELATSSETLISPSLYNGLLTSHGITMLFLFGTPMIAAFG-NYFIPLLIDAD 145
Query: 182 DIAFPRINNIRF 217
D+AFPRIN I F
Sbjct: 146 DMAFPRINAIAF 157
Score = 35.5 bits (78), Expect = 1.1
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = +1
Query: 274 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399
A T T+Y PLS ++ +VD+ + LHL G+S+ +GAIN
Sbjct: 179 AQTSWTMYTPLSLQMS--SPAVDMMMLGLHLTGVSATMGAIN 218
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 40.3 bits (90), Expect = 0.040
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = +1
Query: 274 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399
AG G T Y PLS+N+ G L + ++ + G+SS +GA+N
Sbjct: 155 AGAGWTTYTPLSTNVGMPGMGQTLVVAAIFVTGVSSTMGAVN 196
Score = 34.3 bits (75), Expect = 2.7
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = +2
Query: 71 YNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 217
Y I T H N L+PL++GA D+AFPR+N F
Sbjct: 86 YQQIFTTHGLVMIFFAVTPVLIGTFGNLLIPLMIGARDMAFPRLNMYSF 134
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 40.3 bits (90), Expect = 0.040
Identities = 22/72 (30%), Positives = 34/72 (47%)
Frame = +2
Query: 2 GTRRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAP 181
G LL+R +L P + +++N + T H N VPL++GA
Sbjct: 51 GFEALLMRIQLAFPNNTFLSPEMFNQLFTMHGTTMVFLVGMPVLTGFA-NYFVPLMIGAR 109
Query: 182 DIAFPRINNIRF 217
D+AFPR+N+ F
Sbjct: 110 DVAFPRLNSFGF 121
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 38.7 bits (86), Expect = 0.12
Identities = 20/66 (30%), Positives = 31/66 (46%)
Frame = +2
Query: 20 IRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 199
+R EL P ++YN ++T H N L+PL++G D+AFPR
Sbjct: 52 MRTELATPSPDFVQPEMYNQLMTLHGTIMIFLWIVPAGAAFA-NYLIPLMVGTEDMAFPR 110
Query: 200 INNIRF 217
+N + F
Sbjct: 111 LNAVAF 116
Score = 32.7 bits (71), Expect = 8.1
Identities = 21/39 (53%), Positives = 23/39 (58%)
Frame = +1
Query: 283 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399
G T YPPLS G +L I SL L G SSI+GAIN
Sbjct: 138 GWTSYPPLSLLSGKWGE--ELWILSLLLVGTSSILGAIN 174
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 37.5 bits (83), Expect = 0.28
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = +2
Query: 2 GTRRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAP 181
G ++R +L PG + + +N + T HA N +PL++GA
Sbjct: 48 GLEAWIMRLQLARPGLEVVTARTFNALFTMHATTMIFLGVMPLLSAFM-NYFLPLMIGAR 106
Query: 182 DIAFPRIN 205
D+AFPR+N
Sbjct: 107 DVAFPRLN 114
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 37.5 bits (83), Expect = 0.28
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +2
Query: 2 GTRRLLIRAELGNPGS-LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGA 178
G LLIRAEL PG+ I D +N + T H N VP+++
Sbjct: 39 GALALLIRAELFFPGTQFIADSMTFNRMFTVHGTTLIFLFILPFASAVG-NYFVPIMVRY 97
Query: 179 PDIAFPRINNIRF 217
D+A+P++N I F
Sbjct: 98 KDMAYPKLNAIAF 110
>UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2;
Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase
subunit I - Eutetramorium sp. BLF m1
Length = 201
Score = 37.1 bits (82), Expect = 0.38
Identities = 16/28 (57%), Positives = 22/28 (78%)
Frame = +2
Query: 14 LLIRAELGNPGSLIGDDQIYNTIVTAHA 97
+LIR EL GS++ +QIYNT+VT+HA
Sbjct: 19 MLIRLELETCGSVLRSEQIYNTLVTSHA 46
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 37.1 bits (82), Expect = 0.38
Identities = 24/72 (33%), Positives = 33/72 (45%)
Frame = +2
Query: 2 GTRRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAP 181
G LL R EL + G+ + YN V+ H N LVPL +GA
Sbjct: 41 GVLALLFRLELISSGADLLGSMGYNQAVSTHGLLMVFWFISPFAFGFA-NYLVPLQIGAD 99
Query: 182 DIAFPRINNIRF 217
D+AFPR+N + +
Sbjct: 100 DLAFPRLNALSY 111
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 36.7 bits (81), Expect = 0.50
Identities = 21/72 (29%), Positives = 32/72 (44%)
Frame = +2
Query: 2 GTRRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAP 181
G + IR +L P + Q YN ++T H N +VPL +GA
Sbjct: 43 GIEAMFIRIQLAKPENAFLSAQAYNEVMTMHGTTMIFLAAMPLLFALM-NAVVPLQIGAR 101
Query: 182 DIAFPRINNIRF 217
D++FP +N + F
Sbjct: 102 DVSFPFLNALGF 113
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 36.3 bits (80), Expect = 0.66
Identities = 21/68 (30%), Positives = 28/68 (41%)
Frame = +2
Query: 2 GTRRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAP 181
G L IR +L P + YN ++T HA N +PL LG
Sbjct: 51 GLLALAIRVQLALPEQTLLVGTTYNQVLTMHAAIMLFFFLIPLGLFGFGNYFLPLQLGVR 110
Query: 182 DIAFPRIN 205
D+A PR+N
Sbjct: 111 DVALPRLN 118
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 35.9 bits (79), Expect = 0.87
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +2
Query: 65 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 217
+ Y +VT HA N L+PL++GA D+AFP +N + +
Sbjct: 86 EFYTVLVTMHATVMIFLVIIPILAGAFGNFLIPLMIGADDMAFPTLNMLSY 136
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 35.9 bits (79), Expect = 0.87
Identities = 22/72 (30%), Positives = 31/72 (43%)
Frame = +2
Query: 2 GTRRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAP 181
G +LIRA+L P S + YN + T H L+P +LG+
Sbjct: 48 GVLAMLIRAQLATPRSAFLGPEHYNQVFTMHGTIMMFLFAIPVFEGFAVY-LLPKLLGSR 106
Query: 182 DIAFPRINNIRF 217
D+AFPR+ F
Sbjct: 107 DLAFPRLTAYGF 118
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 35.5 bits (78), Expect = 1.1
Identities = 20/53 (37%), Positives = 28/53 (52%)
Frame = +1
Query: 241 IINFKRIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399
+IN I+ A TG YPPLS VD +S+ ++GI +II +IN
Sbjct: 150 LINISLIIGEFAKTGWLGYPPLSEKTFSPWVGVDYWNWSIQISGIGTIISSIN 202
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 35.5 bits (78), Expect = 1.1
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +2
Query: 17 LIRAELGNPGSL-IGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 193
L+R +LG PG+ D Y +T H N L+PL++GA D+ F
Sbjct: 62 LMRLQLGFPGTFSFIDANQYLQFITMHGMIMVIYLLTALFLGGFGNYLIPLMVGARDMVF 121
Query: 194 PRINNIRF 217
P +N + +
Sbjct: 122 PYVNMLSY 129
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 35.5 bits (78), Expect = 1.1
Identities = 23/72 (31%), Positives = 31/72 (43%)
Frame = +2
Query: 2 GTRRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAP 181
G+ LL R +L P S Y VT H N +VPL +GA
Sbjct: 40 GSLALLFRVQLAIPKSNFLTGDAYYEAVTVHGLIMLLWFASPFAFGLA-NYIVPLQIGAR 98
Query: 182 DIAFPRINNIRF 217
D+AFPR+N + +
Sbjct: 99 DLAFPRLNALSY 110
Score = 33.1 bits (72), Expect = 6.1
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +1
Query: 265 ENGA-GTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399
E+GA G T+Y PL++ I G +DLA ++ L +S +G IN
Sbjct: 127 ESGAPNVGWTLYAPLTARIYTPGIGLDLAALAIFLFSLSVTLGTIN 172
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 35.1 bits (77), Expect = 1.5
Identities = 25/69 (36%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +2
Query: 2 GTRRLLIRAELGNPGS-LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGA 178
G LL+R +L P + IG D+ YN I T H LVPL++G
Sbjct: 48 GVLALLMRLQLAQPEARFIGPDR-YNQIFTMHGSNMMFLFAVPVMQAMAIY-LVPLMVGT 105
Query: 179 PDIAFPRIN 205
IAFPR+N
Sbjct: 106 RHIAFPRLN 114
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 34.7 bits (76), Expect = 2.0
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +2
Query: 65 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 217
+ Y + T HA N L+PL++GA D+AFP++N + +
Sbjct: 90 EFYTMLFTMHATVMIFLVIIPILAGMFGNFLIPLMIGADDMAFPKLNMLSY 140
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 33.5 bits (73), Expect = 4.6
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +1
Query: 241 IINFKRIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399
++N V N A TG YPPL+ VD I++L ++GI + + AIN
Sbjct: 156 LVNLSLGVGNFARTGWVAYPPLAELGFSPDVGVDYYIWALQISGIGTTLTAIN 208
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 32.7 bits (71), Expect = 8.1
Identities = 18/64 (28%), Positives = 29/64 (45%)
Frame = +2
Query: 14 LLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 193
LL+R +L P + D + YN + + H ++PL+LG D+ F
Sbjct: 59 LLMRLQLAVPENDFMDPETYNQVFSMHGITMMFLFAIPVMEGFAVY-IIPLMLGTRDMTF 117
Query: 194 PRIN 205
PR+N
Sbjct: 118 PRLN 121
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 32.7 bits (71), Expect = 8.1
Identities = 19/67 (28%), Positives = 29/67 (43%)
Frame = +2
Query: 2 GTRRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAP 181
G LL+R +L P + + YN + T H L+PL++GA
Sbjct: 74 GVFALLVRLQLMVPENTFLSSETYNQLFTMHGTIMMFLFAIPMLEGFAVY-LIPLMIGAR 132
Query: 182 DIAFPRI 202
D+ FPR+
Sbjct: 133 DLVFPRL 139
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 32.7 bits (71), Expect = 8.1
Identities = 19/67 (28%), Positives = 31/67 (46%)
Frame = +2
Query: 2 GTRRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAP 181
G L++R +L P + + Y+++ T H N L PL+LG+
Sbjct: 68 GVEALVMRIQLARPNATVLTPAQYDSLFTMHGVTMIFLYALPVLSGFA-NYLWPLMLGSR 126
Query: 182 DIAFPRI 202
D+AFPR+
Sbjct: 127 DMAFPRL 133
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 32.7 bits (71), Expect = 8.1
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +1
Query: 265 ENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399
++G G T+YPPLS+ + VDL + + +AG SS + IN
Sbjct: 126 QHGDSIGWTLYPPLST--ISKSIGVDLILLGIIIAGFSSTLTGIN 168
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 551,116,349
Number of Sequences: 1657284
Number of extensions: 9869386
Number of successful extensions: 21174
Number of sequences better than 10.0: 83
Number of HSP's better than 10.0 without gapping: 20120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21112
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50413227838
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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