Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30175
         (663 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    23   2.2  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    23   2.2  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   3.0  

>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +1

Query: 499 SHFFIIITTGFRLGAINNIIYQI 567
           +HF I+     R  AINNII  I
Sbjct: 179 AHFLILTVLKARFEAINNIIDSI 201


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +1

Query: 499 SHFFIIITTGFRLGAINNIIYQI 567
           +HF I+     R  AINNII  I
Sbjct: 179 AHFLILTVLKARFEAINNIIDSI 201


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -2

Query: 659 CPKKFQKLNVDINGGPLLRRDPKNGG 582
           CPK FQ  N ++N         +NGG
Sbjct: 210 CPKGFQGQNCELNVDDCKPNPCQNGG 235


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,015
Number of Sequences: 336
Number of extensions: 2574
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17177325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)