Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30175
         (663 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g27190.1 68415.m03268 iron(III)-zinc(II) purple acid phosphat...    30   1.2  
At1g30860.1 68414.m03774 expressed protein                             28   4.8  
At1g25450.1 68414.m03160 very-long-chain fatty acid condensing e...    27   8.4  

>At2g27190.1 68415.m03268 iron(III)-zinc(II) purple acid phosphatase
           (PAP12) identical to iron(III)-zinc(II) purple acid
           phosphatase [precursor] SP:Q38924 from [Arabidopsis
           thaliana]
          Length = 469

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +3

Query: 558 LPDRKPLNTPIFWIPPEEGTPIYIHI 635
           LPD  PL++ +F +PP   +P  +H+
Sbjct: 40  LPDDMPLDSDVFEVPPGHNSPQQVHV 65


>At1g30860.1 68414.m03774 expressed protein
          Length = 730

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = -1

Query: 603 AGSKKWGYLKVSDLVNNIVNSPQPKTGSDN 514
           +G  KWG  +V+DL+  + N  + +T  DN
Sbjct: 147 SGESKWG--RVADLIRRLSNEDKKRTAGDN 174


>At1g25450.1 68414.m03160 very-long-chain fatty acid condensing
           enzyme, putative nearly identical to fatty acid
           condensing enzyme CUT1 GI:5001734 from [Arabidopsis
           thaliana]
          Length = 492

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
 Frame = +1

Query: 211 KILTPTPLPYIINFKRIVENGA--GTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 381
           KI  P   PYI +FK+  E+      G  V   L  N+   G  V+ +  +LH  G +S
Sbjct: 364 KIFNPKWKPYIPDFKQAFEHFCIHAGGRAVIDELQKNLQLSGEHVEASRMTLHRFGNTS 422


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,922,929
Number of Sequences: 28952
Number of extensions: 221679
Number of successful extensions: 446
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 446
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1393347168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)