Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30173
         (581 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY579078-1|AAT81602.1|  425|Anopheles gambiae neuropeptide F rec...    26   0.77 
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    25   2.4  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    24   3.1  
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    23   7.2  
AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein p...    23   9.5  

>AY579078-1|AAT81602.1|  425|Anopheles gambiae neuropeptide F
           receptor protein.
          Length = 425

 Score = 26.2 bits (55), Expect = 0.77
 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
 Frame = +3

Query: 108 NKNFQEEHLVGRCTTNTG---RANNGRANKSRANKGRA 212
           N NF++E     C T+ G     + G +N SRAN G A
Sbjct: 333 NDNFRKEFNELLCRTSAGGPGHGSGGHSNGSRANGGAA 370


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 24.6 bits (51), Expect = 2.4
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +2

Query: 506 LCTYCSYKSNSIPLLN 553
           +C YC+Y SN + LL+
Sbjct: 128 MCNYCNYTSNKLFLLS 143


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 24.2 bits (50), Expect = 3.1
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 140 QMYHEHRPREQWPG*QKPGEQRPGDR 217
           Q   + RP++Q P  Q+P +QR   R
Sbjct: 466 QQQQQQRPQQQRPQQQRPQQQRSQQR 491


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 23.0 bits (47), Expect = 7.2
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 474 CRSSVTRGRGIFVPTVHISLIR 539
           CRSS+  G  +F P   ++L R
Sbjct: 50  CRSSLASGSKLFAPEPRVALPR 71


>AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein
           protein.
          Length = 527

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +2

Query: 116 LPGRALSRQMYHEHRPREQWPG*QKPGEQR 205
           LP ++  RQ    HR  +QWP  Q+ G+Q+
Sbjct: 259 LPQQSAQRQP--AHRQHQQWPH-QQNGQQQ 285


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 548,681
Number of Sequences: 2352
Number of extensions: 9779
Number of successful extensions: 24
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55506924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)