Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30172
(728 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U42838-2|AAB52493.1| 417|Caenorhabditis elegans Hypothetical pr... 118 6e-27
U43283-1|AAC69025.1| 412|Caenorhabditis elegans Hypothetical pr... 111 4e-25
U29377-4|AAA68712.1| 412|Caenorhabditis elegans Hypothetical pr... 106 1e-23
AC006632-9|AAK85472.1| 409|Caenorhabditis elegans Hypothetical ... 72 4e-13
AF039038-2|AAK21433.1| 419|Caenorhabditis elegans Hypothetical ... 65 4e-11
AC006625-5|AAK68275.1| 427|Caenorhabditis elegans Acyl coa dehy... 64 1e-10
AF127558-1|AAD21088.1| 419|Caenorhabditis elegans isovaleryl-Co... 63 2e-10
AF038605-3|AAB92016.1| 419|Caenorhabditis elegans Hypothetical ... 63 2e-10
U41279-9|AAL02437.1| 220|Caenorhabditis elegans Hypothetical pr... 56 2e-08
U41279-8|AAL02436.1| 307|Caenorhabditis elegans Hypothetical pr... 56 2e-08
U28943-2|AAA68357.1| 613|Caenorhabditis elegans Hypothetical pr... 54 1e-07
Z66513-4|CAA91333.1| 409|Caenorhabditis elegans Hypothetical pr... 42 5e-04
AL032621-7|CAJ30236.1| 608|Caenorhabditis elegans Hypothetical ... 41 0.001
AL032621-6|CAA21490.1| 617|Caenorhabditis elegans Hypothetical ... 41 0.001
AC006733-3|AAF60488.2| 372|Caenorhabditis elegans Hypothetical ... 31 1.1
Z67736-2|CAA91535.1| 226|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z81047-13|CAB60284.1| 368|Caenorhabditis elegans Hypothetical p... 29 3.4
AF016452-12|AAB66011.1| 309|Caenorhabditis elegans Hypothetical... 29 4.5
AL117193-12|CAB60305.1| 415|Caenorhabditis elegans Hypothetical... 28 7.9
>U42838-2|AAB52493.1| 417|Caenorhabditis elegans Hypothetical
protein T08G2.3 protein.
Length = 417
Score = 118 bits (283), Expect = 6e-27
Identities = 55/84 (65%), Positives = 72/84 (85%)
Frame = +1
Query: 4 ARIAWQRAAWMVDHGQKNTVMASVAKCHASEIANKAATDAVQVFGGNGFNTEYPVEKLMR 183
AR+ ++A VD+ +++ AS+AKC A++ AN+AAT+AVQ+FGGNGFN+EYPVEKLMR
Sbjct: 323 ARLITYKSANDVDNKVRSSYNASIAKCFAADTANQAATNAVQIFGGNGFNSEYPVEKLMR 382
Query: 184 DAKIYQIYEGTSQIQRLIISREIL 255
DAKIYQIYEGTSQIQR++ISR +L
Sbjct: 383 DAKIYQIYEGTSQIQRIVISRMLL 406
>U43283-1|AAC69025.1| 412|Caenorhabditis elegans Hypothetical
protein T25G12.5 protein.
Length = 412
Score = 111 bits (268), Expect = 4e-25
Identities = 52/84 (61%), Positives = 68/84 (80%)
Frame = +1
Query: 4 ARIAWQRAAWMVDHGQKNTVMASVAKCHASEIANKAATDAVQVFGGNGFNTEYPVEKLMR 183
AR+ ++ VD G+ + AS+AK AS+ AN+AAT+AVQ+FGG GFNTEYP EKLMR
Sbjct: 320 ARLMTYKSGAEVDAGRPGSYYASIAKLFASDTANQAATNAVQIFGGAGFNTEYPAEKLMR 379
Query: 184 DAKIYQIYEGTSQIQRLIISREIL 255
DAKI+QIYEGTSQIQR++I+R++L
Sbjct: 380 DAKIFQIYEGTSQIQRMVIARQLL 403
>U29377-4|AAA68712.1| 412|Caenorhabditis elegans Hypothetical
protein K05F1.3 protein.
Length = 412
Score = 106 bits (255), Expect = 1e-23
Identities = 52/83 (62%), Positives = 64/83 (77%)
Frame = +1
Query: 4 ARIAWQRAAWMVDHGQKNTVMASVAKCHASEIANKAATDAVQVFGGNGFNTEYPVEKLMR 183
+R+ RAA VD ++ AS+AKC A++ AN AAT+A Q+FGG GFN EYPVEKLMR
Sbjct: 317 SRLFTYRAAAEVDSYGVSSYNASIAKCFAADTANVAATNACQIFGGAGFNCEYPVEKLMR 376
Query: 184 DAKIYQIYEGTSQIQRLIISREI 252
DAKIYQIYEGTSQIQR++I R +
Sbjct: 377 DAKIYQIYEGTSQIQRMVIGRTL 399
>AC006632-9|AAK85472.1| 409|Caenorhabditis elegans Hypothetical
protein F28A10.6 protein.
Length = 409
Score = 72.1 bits (169), Expect = 4e-13
Identities = 33/90 (36%), Positives = 60/90 (66%), Gaps = 1/90 (1%)
Frame = +1
Query: 1 TARIAWQRAAWMVDHGQKNTV-MASVAKCHASEIANKAATDAVQVFGGNGFNTEYPVEKL 177
T+R+ + AA +D+ V + ++AK HA++ A+Q+FGG GF +YPV++
Sbjct: 316 TSRLIVRNAAEQLDNDDPEKVALCAMAKLHATDNCFDVVNGALQMFGGYGFLKDYPVQQY 375
Query: 178 MRDAKIYQIYEGTSQIQRLIISREILPQQL 267
+RD +++QI EGT+++ RL+ISR++L + +
Sbjct: 376 LRDIRVHQILEGTNEMMRLLISRDLLTKDV 405
>AF039038-2|AAK21433.1| 419|Caenorhabditis elegans Hypothetical
protein K06A5.6 protein.
Length = 419
Score = 65.3 bits (152), Expect = 4e-11
Identities = 36/81 (44%), Positives = 48/81 (59%)
Frame = +1
Query: 4 ARIAWQRAAWMVDHGQKNTVMASVAKCHASEIANKAATDAVQVFGGNGFNTEYPVEKLMR 183
AR+ AA M +G A++AK AS++A A + V+ GG GF E+PVEK R
Sbjct: 329 ARLLVYNAARMKQNGLPFVREAAMAKLFASQVATTATSKCVEWLGGVGFTKEFPVEKFYR 388
Query: 184 DAKIYQIYEGTSQIQRLIISR 246
D+KI IYEGTS IQ I++
Sbjct: 389 DSKIGTIYEGTSNIQLNTIAK 409
>AC006625-5|AAK68275.1| 427|Caenorhabditis elegans Acyl coa
dehydrogenase protein1, isoform a protein.
Length = 427
Score = 64.1 bits (149), Expect = 1e-10
Identities = 35/83 (42%), Positives = 48/83 (57%)
Frame = +1
Query: 4 ARIAWQRAAWMVDHGQKNTVMASVAKCHASEIANKAATDAVQVFGGNGFNTEYPVEKLMR 183
AR+ AA M ++G A++AK AS++A + V+ GG GF E+P EK R
Sbjct: 337 ARLLVYNAARMKEYGIPYVREAAMAKLFASQVATSTSAQCVKWLGGVGFTKEFPAEKFYR 396
Query: 184 DAKIYQIYEGTSQIQRLIISREI 252
DA I +IYEGTS IQ I++ I
Sbjct: 397 DAMIGEIYEGTSNIQLNTIAKLI 419
>AF127558-1|AAD21088.1| 419|Caenorhabditis elegans isovaleryl-CoA
dehydrogenase precursorprotein.
Length = 419
Score = 63.3 bits (147), Expect = 2e-10
Identities = 25/56 (44%), Positives = 40/56 (71%)
Frame = +1
Query: 85 HASEIANKAATDAVQVFGGNGFNTEYPVEKLMRDAKIYQIYEGTSQIQRLIISREI 252
+ +E + DA+Q+ GGNG+ +YP +L+RDAK+Y+I GTS+++RLII R +
Sbjct: 358 YVAEKCTQVCLDAIQILGGNGYINDYPAGRLLRDAKLYEIGAGTSEVRRLIIGRAL 413
>AF038605-3|AAB92016.1| 419|Caenorhabditis elegans Hypothetical
protein C02B10.1 protein.
Length = 419
Score = 63.3 bits (147), Expect = 2e-10
Identities = 25/56 (44%), Positives = 40/56 (71%)
Frame = +1
Query: 85 HASEIANKAATDAVQVFGGNGFNTEYPVEKLMRDAKIYQIYEGTSQIQRLIISREI 252
+ +E + DA+Q+ GGNG+ +YP +L+RDAK+Y+I GTS+++RLII R +
Sbjct: 358 YVAEKCTQVCLDAIQILGGNGYINDYPAGRLLRDAKLYEIGAGTSEVRRLIIGRAL 413
>U41279-9|AAL02437.1| 220|Caenorhabditis elegans Hypothetical
protein C17C3.12c protein.
Length = 220
Score = 56.4 bits (130), Expect = 2e-08
Identities = 33/83 (39%), Positives = 43/83 (51%)
Frame = +1
Query: 4 ARIAWQRAAWMVDHGQKNTVMASVAKCHASEIANKAATDAVQVFGGNGFNTEYPVEKLMR 183
AR+ A M D G AS+AK +A E+A K ++ GG GF + EK R
Sbjct: 130 ARLMVYNCARMKDCGMPFVKEASMAKYYAPEVACKTTKQCIEWLGGVGFTKNFMAEKFYR 189
Query: 184 DAKIYQIYEGTSQIQRLIISREI 252
DA + IYEGTS IQ I++ I
Sbjct: 190 DAVVGGIYEGTSNIQLNTIAKFI 212
>U41279-8|AAL02436.1| 307|Caenorhabditis elegans Hypothetical
protein C17C3.12b protein.
Length = 307
Score = 56.4 bits (130), Expect = 2e-08
Identities = 33/83 (39%), Positives = 43/83 (51%)
Frame = +1
Query: 4 ARIAWQRAAWMVDHGQKNTVMASVAKCHASEIANKAATDAVQVFGGNGFNTEYPVEKLMR 183
AR+ A M D G AS+AK +A E+A K ++ GG GF + EK R
Sbjct: 217 ARLMVYNCARMKDCGMPFVKEASMAKYYAPEVACKTTKQCIEWLGGVGFTKNFMAEKFYR 276
Query: 184 DAKIYQIYEGTSQIQRLIISREI 252
DA + IYEGTS IQ I++ I
Sbjct: 277 DAVVGGIYEGTSNIQLNTIAKFI 299
>U28943-2|AAA68357.1| 613|Caenorhabditis elegans Hypothetical
protein E04F6.5a protein.
Length = 613
Score = 54.0 bits (124), Expect = 1e-07
Identities = 28/70 (40%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Frame = +1
Query: 37 VDHGQKNTVM-ASVAKCHASEIANKAATDAVQVFGGNGFNTEYPVEKLMRDAKIYQIYEG 213
+D G K + A++ K ASE A DA+QV GG GF E +E+++RD +I++I+EG
Sbjct: 372 MDRGIKEYQLEAAIGKVLASENAWLVCDDAIQVHGGMGFMRETGLERVLRDLRIFRIFEG 431
Query: 214 TSQIQRLIIS 243
+ + RL I+
Sbjct: 432 ANDVLRLFIA 441
>Z66513-4|CAA91333.1| 409|Caenorhabditis elegans Hypothetical
protein F54D5.7 protein.
Length = 409
Score = 41.9 bits (94), Expect = 5e-04
Identities = 23/77 (29%), Positives = 38/77 (49%)
Frame = +1
Query: 22 RAAWMVDHGQKNTVMASVAKCHASEIANKAATDAVQVFGGNGFNTEYPVEKLMRDAKIYQ 201
R + + D G+ + S+ K ++ A + A A + GGNG EY + + M + +
Sbjct: 326 RVSRLKDEGKVQSEQISIIKRNSCGKALEVARKARDMLGGNGIVDEYHIMRHMVNLETVN 385
Query: 202 IYEGTSQIQRLIISREI 252
YEGT + LI+ R I
Sbjct: 386 TYEGTHDVHALILGRAI 402
>AL032621-7|CAJ30236.1| 608|Caenorhabditis elegans Hypothetical
protein Y45F3A.3b protein.
Length = 608
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/62 (29%), Positives = 36/62 (58%)
Frame = +1
Query: 61 VMASVAKCHASEIANKAATDAVQVFGGNGFNTEYPVEKLMRDAKIYQIYEGTSQIQRLII 240
++ V K +A + A ++ ++ FGG G+ + + L+RDA++ I+EGT+ + L +
Sbjct: 406 LITPVLKLYAGKQAVPMVSEGIECFGGQGYMEDTGLPTLLRDAQVTPIWEGTTNVLSLDV 465
Query: 241 SR 246
R
Sbjct: 466 LR 467
>AL032621-6|CAA21490.1| 617|Caenorhabditis elegans Hypothetical
protein Y45F3A.3a protein.
Length = 617
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/62 (29%), Positives = 36/62 (58%)
Frame = +1
Query: 61 VMASVAKCHASEIANKAATDAVQVFGGNGFNTEYPVEKLMRDAKIYQIYEGTSQIQRLII 240
++ V K +A + A ++ ++ FGG G+ + + L+RDA++ I+EGT+ + L +
Sbjct: 415 LITPVLKLYAGKQAVPMVSEGIECFGGQGYMEDTGLPTLLRDAQVTPIWEGTTNVLSLDV 474
Query: 241 SR 246
R
Sbjct: 475 LR 476
>AC006733-3|AAF60488.2| 372|Caenorhabditis elegans Hypothetical
protein Y32H12A.1 protein.
Length = 372
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = -1
Query: 203 IWYILASRISFSTGYSVLKPFPP-NTCTASVAALLAISEA*HLATDAITVFFCPWSTIHA 27
+W I+++ +S+L + N C SV LL I VFF P + +
Sbjct: 74 LWLIISNYQKLHKTFSILLTYTLINDCLISVTLLLTIKRIVQCHETLAMVFFGPCTFVST 133
Query: 26 ARCHAIRA 3
+ CH + A
Sbjct: 134 SFCHVLDA 141
>Z67736-2|CAA91535.1| 226|Caenorhabditis elegans Hypothetical
protein F57G12.2 protein.
Length = 226
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Frame = +2
Query: 23 APHGWLTTDKRIQLWHQWPSVMLRKSLTR----QPLMRCKCSEETASTP-NTQSR 172
APH + D I++ Q+PS ++S+ R +P++R S E P N Q R
Sbjct: 150 APHEIINMDSHIRMTPQFPSAKAKRSMVRKLAQKPIIRSMTSTECGIFPINMQCR 204
>Z81047-13|CAB60284.1| 368|Caenorhabditis elegans Hypothetical
protein C41G6.15 protein.
Length = 368
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +3
Query: 582 NVSIWEFITPDSMYDTSLFFL*ILYVCK--FFQKLFLIIIKLSNL 710
++S +E+I PD Y S+FFL Y K F+ + II+ L +L
Sbjct: 8 SISDYEYIAPDDDYYQSIFFLTAEYSIKANFYLQAPTIIVNLFHL 52
>AF016452-12|AAB66011.1| 309|Caenorhabditis elegans Hypothetical
protein T05H4.5 protein.
Length = 309
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -2
Query: 652 KIYRKNRLVSYIESGVMNSHMETLFL*DKNNF 557
K+Y KN + E G M+ H+E+L + D NF
Sbjct: 119 KVYFKNTNEKFPEGGKMSQHLESLKIGDTINF 150
>AL117193-12|CAB60305.1| 415|Caenorhabditis elegans Hypothetical
protein Y105C5A.23 protein.
Length = 415
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 5/46 (10%)
Frame = -3
Query: 441 WFGGFLLCTLV-----FFFRSTGRLFLYMK*YNRVQPMAPSHYTPN 319
W GG LC +V F F+S+ + + + + ++PSH++PN
Sbjct: 100 WRGGDALCKIVKMFHTFAFQSSSNVIVCIAVDRLLSVLSPSHHSPN 145
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,184,151
Number of Sequences: 27780
Number of extensions: 368022
Number of successful extensions: 1041
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1041
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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