Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30172
(728 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive... 24 1.7
U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 23 3.9
AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor p... 23 3.9
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 23 3.9
AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 23 3.9
AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein. 22 5.2
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 21 9.0
AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein. 21 9.0
AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 21 9.0
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 9.0
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 9.0
AB023025-1|BAA74592.1| 133|Apis mellifera actin protein. 21 9.0
>AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive
opsin protein.
Length = 371
Score = 23.8 bits (49), Expect = 1.7
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +3
Query: 579 NNVSIWEFITPDSMYDTSLFFL*ILYVCKFFQKL 680
N + IW F S+ S F+ L +C FF +
Sbjct: 66 NGLVIWIFCAAKSLRTPSNMFVVNLAICDFFMMI 99
>U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive
opsin protein.
Length = 377
Score = 22.6 bits (46), Expect = 3.9
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +2
Query: 572 LQKQCFHMGVHYP 610
LQK+C MG+H P
Sbjct: 347 LQKRCKWMGIHEP 359
>AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor
protein.
Length = 139
Score = 22.6 bits (46), Expect = 3.9
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -3
Query: 435 GGFLLCTLVFFFRSTGRLF 379
GGF+LC L FF R F
Sbjct: 16 GGFILCWLPFFTMYLVRAF 34
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 22.6 bits (46), Expect = 3.9
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -3
Query: 435 GGFLLCTLVFFFRSTGRLF 379
GGF+LC L FF R F
Sbjct: 464 GGFILCWLPFFTMYLVRAF 482
>AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin
protein.
Length = 377
Score = 22.6 bits (46), Expect = 3.9
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +2
Query: 572 LQKQCFHMGVHYP 610
LQK+C MG+H P
Sbjct: 347 LQKRCKWMGIHEP 359
>AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein.
Length = 388
Score = 22.2 bits (45), Expect = 5.2
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -1
Query: 635 QTCVIHRVRGNELPYGNIVSVRQKQ 561
Q C V G E+ GNI +V K+
Sbjct: 119 QECTFISVNGKEVHSGNIEAVTTKE 143
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = -1
Query: 65 ITVFFCPWSTIHAARCHAIRA 3
+ FF W+ HA R A+ A
Sbjct: 291 VVAFFICWAPFHAQRLLAVYA 311
>AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein.
Length = 349
Score = 21.4 bits (43), Expect = 9.0
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -3
Query: 441 WFGGFLLCTLVFFFRSTG 388
W G ++C ++ FFR G
Sbjct: 104 WKAGDVMCRIMAFFRMFG 121
>AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor
protein.
Length = 405
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +1
Query: 328 VMGWGHRLNSIVLFHI 375
V+GWGH + +L HI
Sbjct: 294 VLGWGHTSFNGMLSHI 309
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +2
Query: 407 KTRVHNKKPPNQTKYTFLIL 466
K HN NQ ++TF+ L
Sbjct: 1571 KVETHNVAGSNQAEFTFVTL 1590
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +2
Query: 407 KTRVHNKKPPNQTKYTFLIL 466
K HN NQ ++TF+ L
Sbjct: 1567 KVETHNVAGSNQAEFTFVTL 1586
>AB023025-1|BAA74592.1| 133|Apis mellifera actin protein.
Length = 133
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -3
Query: 450 YLVWFGGFLLCTLVFF 403
Y VW GG +L +L F
Sbjct: 112 YSVWIGGSILASLSTF 127
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,459
Number of Sequences: 438
Number of extensions: 5140
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22657590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -