Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30171
(679 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U72511-1|AAC51639.1| 211|Homo sapiens B-cell receptor associate... 60 5e-09
U47924-19|AAB51324.1| 299|Homo sapiens B-cell receptor associat... 60 5e-09
BC110322-1|AAI10323.1| 299|Homo sapiens prohibitin 2 protein. 60 5e-09
BC014766-1|AAH14766.1| 299|Homo sapiens prohibitin 2 protein. 60 5e-09
AF178980-1|AAF44345.1| 299|Homo sapiens D-prohibitin protein. 60 5e-09
AF150962-1|AAD38042.1| 299|Homo sapiens repressor of estrogen r... 60 5e-09
AF126021-1|AAF17231.1| 299|Homo sapiens B-cell receptor-associa... 60 5e-09
AF279895-1|AAK07552.1| 69|Homo sapiens PNAS-141 protein. 39 0.014
BC041613-1|AAH41613.1| 348|Homo sapiens transcription elongatio... 31 2.8
AY540752-1|AAT44402.1| 154|Homo sapiens rhabdomyosarcoma antige... 31 2.8
AL357134-3|CAI22178.1| 348|Homo sapiens transcription elongatio... 31 2.8
AL109936-2|CAI19025.1| 348|Homo sapiens transcription elongatio... 31 2.8
AJ223473-1|CAA11393.1| 320|Homo sapiens transcription elongatio... 31 2.8
>U72511-1|AAC51639.1| 211|Homo sapiens B-cell receptor associated
protein protein.
Length = 211
Score = 60.5 bits (140), Expect = 5e-09
Identities = 34/82 (41%), Positives = 42/82 (51%)
Frame = +2
Query: 2 LTELSFGKEYTXXXXXXXXXXXXXXXXXXXXXRAKQERQQKIVQXXXXXXXXXXXXXXXX 181
+TELSF +EYT +AKQE++QKIVQ
Sbjct: 96 ITELSFSREYTAAVEAKQVAQQEAQRAQFLVEKAKQEQRQKIVQAEGEAEAAKMLGEALS 155
Query: 182 XNPGYLKLRKIRAAQSISRMIA 247
NPGY+KLRKIRAAQ+IS+ IA
Sbjct: 156 KNPGYIKLRKIRAAQNISKTIA 177
Score = 30.7 bits (66), Expect = 5.0
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +1
Query: 256 NRVFLPGNSLMINLQDPTFDDLSEKLTKKK 345
NR++L ++L++NLQD +F S+ L K K
Sbjct: 181 NRIYLTADNLVLNLQDESFTRGSDSLIKGK 210
>U47924-19|AAB51324.1| 299|Homo sapiens B-cell receptor associated
protein protein.
Length = 299
Score = 60.5 bits (140), Expect = 5e-09
Identities = 34/82 (41%), Positives = 42/82 (51%)
Frame = +2
Query: 2 LTELSFGKEYTXXXXXXXXXXXXXXXXXXXXXRAKQERQQKIVQXXXXXXXXXXXXXXXX 181
+TELSF +EYT +AKQE++QKIVQ
Sbjct: 184 ITELSFSREYTAAVEAKQVAQQEAQRAQFLVEKAKQEQRQKIVQAEGEAEAAKMLGEALS 243
Query: 182 XNPGYLKLRKIRAAQSISRMIA 247
NPGY+KLRKIRAAQ+IS+ IA
Sbjct: 244 KNPGYIKLRKIRAAQNISKTIA 265
Score = 30.7 bits (66), Expect = 5.0
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +1
Query: 256 NRVFLPGNSLMINLQDPTFDDLSEKLTKKK 345
NR++L ++L++NLQD +F S+ L K K
Sbjct: 269 NRIYLTADNLVLNLQDESFTRGSDSLIKGK 298
>BC110322-1|AAI10323.1| 299|Homo sapiens prohibitin 2 protein.
Length = 299
Score = 60.5 bits (140), Expect = 5e-09
Identities = 34/82 (41%), Positives = 42/82 (51%)
Frame = +2
Query: 2 LTELSFGKEYTXXXXXXXXXXXXXXXXXXXXXRAKQERQQKIVQXXXXXXXXXXXXXXXX 181
+TELSF +EYT +AKQE++QKIVQ
Sbjct: 184 ITELSFSREYTAAVEAKQVAQQEAQRAQFLVEKAKQEQRQKIVQAEGEAEAAKMLGEALS 243
Query: 182 XNPGYLKLRKIRAAQSISRMIA 247
NPGY+KLRKIRAAQ+IS+ IA
Sbjct: 244 KNPGYIKLRKIRAAQNISKTIA 265
Score = 30.7 bits (66), Expect = 5.0
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +1
Query: 256 NRVFLPGNSLMINLQDPTFDDLSEKLTKKK 345
NR++L ++L++NLQD +F S+ L K K
Sbjct: 269 NRIYLTADNLVLNLQDESFTRGSDSLIKGK 298
>BC014766-1|AAH14766.1| 299|Homo sapiens prohibitin 2 protein.
Length = 299
Score = 60.5 bits (140), Expect = 5e-09
Identities = 34/82 (41%), Positives = 42/82 (51%)
Frame = +2
Query: 2 LTELSFGKEYTXXXXXXXXXXXXXXXXXXXXXRAKQERQQKIVQXXXXXXXXXXXXXXXX 181
+TELSF +EYT +AKQE++QKIVQ
Sbjct: 184 ITELSFSREYTAAVEAKQVAQQEAQRAQFLVEKAKQEQRQKIVQAEGEAEAAKMLGEALS 243
Query: 182 XNPGYLKLRKIRAAQSISRMIA 247
NPGY+KLRKIRAAQ+IS+ IA
Sbjct: 244 KNPGYIKLRKIRAAQNISKTIA 265
Score = 30.7 bits (66), Expect = 5.0
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +1
Query: 256 NRVFLPGNSLMINLQDPTFDDLSEKLTKKK 345
NR++L ++L++NLQD +F S+ L K K
Sbjct: 269 NRIYLTADNLVLNLQDESFTRGSDSLIKGK 298
>AF178980-1|AAF44345.1| 299|Homo sapiens D-prohibitin protein.
Length = 299
Score = 60.5 bits (140), Expect = 5e-09
Identities = 34/82 (41%), Positives = 42/82 (51%)
Frame = +2
Query: 2 LTELSFGKEYTXXXXXXXXXXXXXXXXXXXXXRAKQERQQKIVQXXXXXXXXXXXXXXXX 181
+TELSF +EYT +AKQE++QKIVQ
Sbjct: 184 ITELSFSREYTAAVEAKQVAQQEAQRAQFLVEKAKQEQRQKIVQAEGEAEAAKMLGEALS 243
Query: 182 XNPGYLKLRKIRAAQSISRMIA 247
NPGY+KLRKIRAAQ+IS+ IA
Sbjct: 244 KNPGYIKLRKIRAAQNISKTIA 265
Score = 30.7 bits (66), Expect = 5.0
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +1
Query: 256 NRVFLPGNSLMINLQDPTFDDLSEKLTKKK 345
NR++L ++L++NLQD +F S+ L K K
Sbjct: 269 NRIYLTADNLVLNLQDESFTRGSDSLIKGK 298
>AF150962-1|AAD38042.1| 299|Homo sapiens repressor of estrogen
receptor activity protein.
Length = 299
Score = 60.5 bits (140), Expect = 5e-09
Identities = 34/82 (41%), Positives = 42/82 (51%)
Frame = +2
Query: 2 LTELSFGKEYTXXXXXXXXXXXXXXXXXXXXXRAKQERQQKIVQXXXXXXXXXXXXXXXX 181
+TELSF +EYT +AKQE++QKIVQ
Sbjct: 184 ITELSFSREYTAAVEAKQVAQQEAQRAQFLVEKAKQEQRQKIVQAEGEAEAAKMLGEALS 243
Query: 182 XNPGYLKLRKIRAAQSISRMIA 247
NPGY+KLRKIRAAQ+IS+ IA
Sbjct: 244 KNPGYIKLRKIRAAQNISKTIA 265
Score = 30.7 bits (66), Expect = 5.0
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +1
Query: 256 NRVFLPGNSLMINLQDPTFDDLSEKLTKKK 345
NR++L ++L++NLQD +F S+ L K K
Sbjct: 269 NRIYLTADNLVLNLQDESFTRGSDSLIKGK 298
>AF126021-1|AAF17231.1| 299|Homo sapiens B-cell receptor-associated
protein BAP37 protein.
Length = 299
Score = 60.5 bits (140), Expect = 5e-09
Identities = 34/82 (41%), Positives = 42/82 (51%)
Frame = +2
Query: 2 LTELSFGKEYTXXXXXXXXXXXXXXXXXXXXXRAKQERQQKIVQXXXXXXXXXXXXXXXX 181
+TELSF +EYT +AKQE++QKIVQ
Sbjct: 184 ITELSFSREYTAAVEAKQVAQQEAQRAQFLVEKAKQEQRQKIVQAEGEAEAAKMLGEALS 243
Query: 182 XNPGYLKLRKIRAAQSISRMIA 247
NPGY+KLRKIRAAQ+IS+ IA
Sbjct: 244 KNPGYIKLRKIRAAQNISKTIA 265
Score = 30.7 bits (66), Expect = 5.0
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +1
Query: 256 NRVFLPGNSLMINLQDPTFDDLSEKLTKKK 345
NR++L ++L++NLQD +F S+ L K K
Sbjct: 269 NRIYLTADNLVLNLQDESFTRGSDSLIKGK 298
>AF279895-1|AAK07552.1| 69|Homo sapiens PNAS-141 protein.
Length = 69
Score = 39.1 bits (87), Expect = 0.014
Identities = 17/21 (80%), Positives = 20/21 (95%)
Frame = +2
Query: 185 NPGYLKLRKIRAAQSISRMIA 247
NPGY+KLRKIRAAQ+IS+ IA
Sbjct: 15 NPGYIKLRKIRAAQNISKTIA 35
Score = 30.7 bits (66), Expect = 5.0
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +1
Query: 256 NRVFLPGNSLMINLQDPTFDDLSEKLTKKK 345
NR++L ++L++NLQD +F S+ L K K
Sbjct: 39 NRIYLTADNLVLNLQDESFTRGSDSLIKGK 68
>BC041613-1|AAH41613.1| 348|Homo sapiens transcription elongation
factor A (SII), 3 protein.
Length = 348
Score = 31.5 bits (68), Expect = 2.8
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +3
Query: 48 LNKLHNRRLSVQLL*LKGQSKSVN--RKLCKQREKLKLLRCWVKPW 179
L KLH+ ++S+QLL +VN RK C +E + L + +K W
Sbjct: 30 LKKLHSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNW 75
>AY540752-1|AAT44402.1| 154|Homo sapiens rhabdomyosarcoma antigen
MU-RMS-40.22 protein.
Length = 154
Score = 31.5 bits (68), Expect = 2.8
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +3
Query: 48 LNKLHNRRLSVQLL*LKGQSKSVN--RKLCKQREKLKLLRCWVKPW 179
L KLH+ ++S+QLL +VN RK C +E + L + +K W
Sbjct: 30 LKKLHSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNW 75
>AL357134-3|CAI22178.1| 348|Homo sapiens transcription elongation
factor A (SII), 3 protein.
Length = 348
Score = 31.5 bits (68), Expect = 2.8
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +3
Query: 48 LNKLHNRRLSVQLL*LKGQSKSVN--RKLCKQREKLKLLRCWVKPW 179
L KLH+ ++S+QLL +VN RK C +E + L + +K W
Sbjct: 30 LKKLHSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNW 75
>AL109936-2|CAI19025.1| 348|Homo sapiens transcription elongation
factor A (SII), 3 protein.
Length = 348
Score = 31.5 bits (68), Expect = 2.8
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +3
Query: 48 LNKLHNRRLSVQLL*LKGQSKSVN--RKLCKQREKLKLLRCWVKPW 179
L KLH+ ++S+QLL +VN RK C +E + L + +K W
Sbjct: 30 LKKLHSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNW 75
>AJ223473-1|CAA11393.1| 320|Homo sapiens transcription elongation
factor TFIIS.h protein.
Length = 320
Score = 31.5 bits (68), Expect = 2.8
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +3
Query: 48 LNKLHNRRLSVQLL*LKGQSKSVN--RKLCKQREKLKLLRCWVKPW 179
L KLH+ ++S+QLL +VN RK C +E + L + +K W
Sbjct: 2 LKKLHSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNW 47
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,058,650
Number of Sequences: 237096
Number of extensions: 1337204
Number of successful extensions: 1979
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1963
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7671262118
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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