Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30171
         (679 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061508-1|AAL29056.1|  299|Drosophila melanogaster LD46344p pro...    67   2e-11
AE013599-2777|AAM68447.1|  243|Drosophila melanogaster CG15081-P...    40   0.003
AE013599-2776|AAF57631.2|  243|Drosophila melanogaster CG15081-P...    40   0.003
AE013599-2775|AAF57632.2|  243|Drosophila melanogaster CG15081-P...    40   0.003

>AY061508-1|AAL29056.1|  299|Drosophila melanogaster LD46344p
           protein.
          Length = 299

 Score = 66.9 bits (156), Expect = 2e-11
 Identities = 39/82 (47%), Positives = 42/82 (51%)
 Frame = +2

Query: 2   LTELSFGKEYTXXXXXXXXXXXXXXXXXXXXXRAKQERQQKIVQXXXXXXXXXXXXXXXX 181
           LTELSFGKEYT                     RAKQE+QQKIVQ                
Sbjct: 185 LTELSFGKEYTAAIEAKQVAQQEAQRAVFFVERAKQEKQQKIVQAEGEAEAAKMLGLAVK 244

Query: 182 XNPGYLKLRKIRAAQSISRMIA 247
            NP YLKLRK+RAAQSI+R IA
Sbjct: 245 QNPAYLKLRKLRAAQSIARTIA 266



 Score = 41.1 bits (92), Expect = 0.001
 Identities = 17/33 (51%), Positives = 25/33 (75%)
 Frame = +1

Query: 247 SISNRVFLPGNSLMINLQDPTFDDLSEKLTKKK 345
           S  N+V+L  +SLM+N+QD  FDD++EK+ K K
Sbjct: 267 SSQNKVYLSADSLMLNIQDSGFDDMTEKVYKSK 299


>AE013599-2777|AAM68447.1|  243|Drosophila melanogaster CG15081-PC,
           isoform C protein.
          Length = 243

 Score = 39.9 bits (89), Expect = 0.003
 Identities = 22/44 (50%), Positives = 23/44 (52%)
 Frame = +2

Query: 2   LTELSFGKEYTXXXXXXXXXXXXXXXXXXXXXRAKQERQQKIVQ 133
           LTELSFGKEYT                     RAKQE+QQKIVQ
Sbjct: 185 LTELSFGKEYTAAIEAKQVAQQEAQRAVFFVERAKQEKQQKIVQ 228


>AE013599-2776|AAF57631.2|  243|Drosophila melanogaster CG15081-PB,
           isoform B protein.
          Length = 243

 Score = 39.9 bits (89), Expect = 0.003
 Identities = 22/44 (50%), Positives = 23/44 (52%)
 Frame = +2

Query: 2   LTELSFGKEYTXXXXXXXXXXXXXXXXXXXXXRAKQERQQKIVQ 133
           LTELSFGKEYT                     RAKQE+QQKIVQ
Sbjct: 185 LTELSFGKEYTAAIEAKQVAQQEAQRAVFFVERAKQEKQQKIVQ 228


>AE013599-2775|AAF57632.2|  243|Drosophila melanogaster CG15081-PA,
           isoform A protein.
          Length = 243

 Score = 39.9 bits (89), Expect = 0.003
 Identities = 22/44 (50%), Positives = 23/44 (52%)
 Frame = +2

Query: 2   LTELSFGKEYTXXXXXXXXXXXXXXXXXXXXXRAKQERQQKIVQ 133
           LTELSFGKEYT                     RAKQE+QQKIVQ
Sbjct: 185 LTELSFGKEYTAAIEAKQVAQQEAQRAVFFVERAKQEKQQKIVQ 228


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,130,092
Number of Sequences: 53049
Number of extensions: 409825
Number of successful extensions: 858
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 778
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 853
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2951284050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)