Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30169
         (700 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    27   0.43 
AJ459962-1|CAD31061.1|  685|Anopheles gambiae prophenoloxidase 9...    25   1.7  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    24   4.0  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    24   4.0  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   7.0  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   7.0  

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 27.5 bits (58), Expect = 0.43
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +1

Query: 403 ELPNPKGAKGVPPPQRIWEMVMNELDRREDPSNDEFYPDVP 525
           ELP+  G   V  P++I E VMN +   +  S D+    +P
Sbjct: 645 ELPDESGEPVVENPKQIEEAVMNLITNLQPDSEDKLLNTMP 685


>AJ459962-1|CAD31061.1|  685|Anopheles gambiae prophenoloxidase 9
           protein.
          Length = 685

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +3

Query: 198 IEKFSNITDNSVVGVRAPYY 257
           I+   NI +NS++ V  PYY
Sbjct: 342 IDILGNIMENSILSVNVPYY 361


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 273  ISSP*WKNRHSYTTALLQHLYQ 338
            +SS  W+ R  Y   L+QH ++
Sbjct: 1982 VSSTLWRQREEYCARLIQHAWK 2003


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +1

Query: 406 LPNPKGAKGVPPPQ 447
           LP P+G +G+P PQ
Sbjct: 613 LPGPQGQRGLPGPQ 626


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = +1

Query: 247  HLITCRWQ*SVHHDGRTGILIRQHYYSTFIKP 342
            HL+   W+  VH      +LI   +  TF  P
Sbjct: 943  HLLHLNWKHEVHRQSTIDVLIEDLHTYTFNPP 974


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = +1

Query: 247  HLITCRWQ*SVHHDGRTGILIRQHYYSTFIKP 342
            HL+   W+  VH      +LI   +  TF  P
Sbjct: 944  HLLHLNWKHEVHRQSTIDVLIEDLHTYTFNPP 975


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 825,758
Number of Sequences: 2352
Number of extensions: 19315
Number of successful extensions: 30
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)