Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30169
(700 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK022935-1|BAB14316.1| 636|Homo sapiens protein ( Homo sapiens ... 35 0.32
Y15921-1|CAA75881.1| 144|Homo sapiens COL1A1 and PDGFB fusion t... 32 2.3
AF111169-4|AAD44364.1| 608|Homo sapiens unknown protein. 32 2.3
Y15918-1|CAA75878.1| 173|Homo sapiens COL1A1 and PDGFB fusion t... 31 5.2
AF211950-1|AAG10399.1| 397|Homo sapiens lim-homeobox transcript... 25 6.9
BC008965-1|AAH08965.2| 837|Homo sapiens BAZ2A protein protein. 30 6.9
AB002312-1|BAA20773.2| 1899|Homo sapiens KIAA0314 protein protein. 30 6.9
BC146791-1|AAI46792.1| 1858|Homo sapiens myosin XVI protein. 30 9.1
AL390918-1|CAI15821.1| 1858|Homo sapiens protein ( Human DNA seq... 30 9.1
AL353143-1|CAH73221.1| 1858|Homo sapiens protein ( Human DNA seq... 30 9.1
AL161431-1|CAI15548.1| 1858|Homo sapiens protein ( Human DNA seq... 30 9.1
AL157771-1|CAI16366.1| 1858|Homo sapiens protein ( Human DNA seq... 30 9.1
AL136132-1|CAH70519.1| 1858|Homo sapiens protein ( Human DNA seq... 30 9.1
AB020672-1|BAA74888.2| 1900|Homo sapiens KIAA0865 protein protein. 30 9.1
>AK022935-1|BAB14316.1| 636|Homo sapiens protein ( Homo sapiens
cDNA FLJ12873 fis, clone NT2RP2003764. ).
Length = 636
Score = 34.7 bits (76), Expect = 0.32
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +2
Query: 329 PLSNPPLWPYTMYFRMPHRCHGNLQSCPTQRGQKGSPP 442
P+ +P WP + + P RCHG L + QR Q GS P
Sbjct: 592 PVEHPQEWPQGIRVQPPLRCHGPLCAVWIQRLQAGSSP 629
>Y15921-1|CAA75881.1| 144|Homo sapiens COL1A1 and PDGFB fusion
transcript protein.
Length = 144
Score = 31.9 bits (69), Expect = 2.3
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +1
Query: 379 PPMPRKPSELPNPKGAKGVPPPQRIWEMVMNELDRRED 492
P P P LP P GA G P P+ ++EM+ + R D
Sbjct: 20 PMGPSGPRGLPGPPGAPGDPIPEELYEMLSDHSIRSFD 57
>AF111169-4|AAD44364.1| 608|Homo sapiens unknown protein.
Length = 608
Score = 31.9 bits (69), Expect = 2.3
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +1
Query: 304 LIRQHYY--STFIKPPSLALHHVL*DAPPMPRKPSELPNPKGAKGVPPP 444
+++++YY + PP LAL + D+ P KP LP P+ G PP
Sbjct: 64 MLQENYYLQEMVLCPPVLALTIIPGDSQPTGDKPEALPGPRLPPGSCPP 112
>Y15918-1|CAA75878.1| 173|Homo sapiens COL1A1 and PDGFB fusion
transcript protein.
Length = 173
Score = 30.7 bits (66), Expect = 5.2
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 382 PMPRKPSELPNPKGAKGVPPPQRIWEMVMNELDRRED 492
P R + LP PKG +G P P+ ++EM+ + R D
Sbjct: 132 PGERGAAGLPGPKGDRGDPIPEELYEMLSDHSIRSFD 168
>AF211950-1|AAG10399.1| 397|Homo sapiens lim-homeobox transcription
factor LHX3 protein.
Length = 397
Score = 24.6 bits (51), Expect(2) = 6.9
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +1
Query: 415 PKGAKGVPPPQRIWEMVMNELDRREDPSNDEFYPDVP 525
P GA G PPP R+ D S YPD P
Sbjct: 348 PSGAPGGPPPMRVLAGTGPSSDLSTGSSGG--YPDFP 382
Score = 24.2 bits (50), Expect(2) = 6.9
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +1
Query: 379 PPMPRKPSELPNPK 420
PP+PR+P+E P P+
Sbjct: 318 PPIPRRPAEPPWPQ 331
>BC008965-1|AAH08965.2| 837|Homo sapiens BAZ2A protein protein.
Length = 837
Score = 30.3 bits (65), Expect = 6.9
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 382 PMPRKPSELPNPKGAKGVPPPQRIW 456
P P +P E P P A+ P PQ +W
Sbjct: 235 PAPSQPPEEPEPDEAESSPDPQALW 259
>AB002312-1|BAA20773.2| 1899|Homo sapiens KIAA0314 protein protein.
Length = 1899
Score = 30.3 bits (65), Expect = 6.9
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 382 PMPRKPSELPNPKGAKGVPPPQRIW 456
P P +P E P P A+ P PQ +W
Sbjct: 1293 PAPSQPPEEPEPDEAESSPDPQALW 1317
>BC146791-1|AAI46792.1| 1858|Homo sapiens myosin XVI protein.
Length = 1858
Score = 29.9 bits (64), Expect = 9.1
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +1
Query: 355 LHHVL*DAPPMP--RKPSELPNPKGAKGVPPPQRIWE 459
LHH PP P +KPS L P+GA P +W+
Sbjct: 1819 LHHAEPRVPPPPPCKKPSLLKKPEGASCNRLPSELWD 1855
>AL390918-1|CAI15821.1| 1858|Homo sapiens protein ( Human DNA sequence
from clone RP11-569E4 on chromosome 13 Contains part of
a novel gene (KIAA0865), possible ortholog of rat myosin
).
Length = 1858
Score = 29.9 bits (64), Expect = 9.1
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +1
Query: 355 LHHVL*DAPPMP--RKPSELPNPKGAKGVPPPQRIWE 459
LHH PP P +KPS L P+GA P +W+
Sbjct: 1819 LHHAEPRVPPPPPCKKPSLLKKPEGASCNRLPSELWD 1855
>AL353143-1|CAH73221.1| 1858|Homo sapiens protein ( Human DNA sequence
from clone RP11-383F12 on chromosome 13 Contains part of
a novel gene (including KIAA0865), possible ortholog of
rat asin A2 ).
Length = 1858
Score = 29.9 bits (64), Expect = 9.1
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +1
Query: 355 LHHVL*DAPPMP--RKPSELPNPKGAKGVPPPQRIWE 459
LHH PP P +KPS L P+GA P +W+
Sbjct: 1819 LHHAEPRVPPPPPCKKPSLLKKPEGASCNRLPSELWD 1855
>AL161431-1|CAI15548.1| 1858|Homo sapiens protein ( Human DNA sequence
from clone RP11-54H7 on chromosome 13 Contains the 3'
end a novel gene (including KIAA0865) possible ortholog
of ).
Length = 1858
Score = 29.9 bits (64), Expect = 9.1
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +1
Query: 355 LHHVL*DAPPMP--RKPSELPNPKGAKGVPPPQRIWE 459
LHH PP P +KPS L P+GA P +W+
Sbjct: 1819 LHHAEPRVPPPPPCKKPSLLKKPEGASCNRLPSELWD 1855
>AL157771-1|CAI16366.1| 1858|Homo sapiens protein ( Human DNA sequence
from clone RP11-67J18 on chromosome 13 Contains the 5'
end of a novel gene (including KIAA0865), possible
ortholog ).
Length = 1858
Score = 29.9 bits (64), Expect = 9.1
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +1
Query: 355 LHHVL*DAPPMP--RKPSELPNPKGAKGVPPPQRIWE 459
LHH PP P +KPS L P+GA P +W+
Sbjct: 1819 LHHAEPRVPPPPPCKKPSLLKKPEGASCNRLPSELWD 1855
>AL136132-1|CAH70519.1| 1858|Homo sapiens protein ( Human DNA sequence
from clone RP11-141M24 on chromosome 13q33.1-34 Contains
part of a novel gene, possible ortholog of rat myosin
heavy ).
Length = 1858
Score = 29.9 bits (64), Expect = 9.1
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +1
Query: 355 LHHVL*DAPPMP--RKPSELPNPKGAKGVPPPQRIWE 459
LHH PP P +KPS L P+GA P +W+
Sbjct: 1819 LHHAEPRVPPPPPCKKPSLLKKPEGASCNRLPSELWD 1855
>AB020672-1|BAA74888.2| 1900|Homo sapiens KIAA0865 protein protein.
Length = 1900
Score = 29.9 bits (64), Expect = 9.1
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +1
Query: 355 LHHVL*DAPPMP--RKPSELPNPKGAKGVPPPQRIWE 459
LHH PP P +KPS L P+GA P +W+
Sbjct: 1861 LHHAEPRVPPPPPCKKPSLLKKPEGASCNRLPSELWD 1897
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,020,393
Number of Sequences: 237096
Number of extensions: 2995857
Number of successful extensions: 10066
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 8104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10024
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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