Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30166
         (694 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              24   4.0  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          24   4.0  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   6.9  
AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding pr...    23   6.9  
AY146749-1|AAO12064.1|  336|Anopheles gambiae odorant-binding pr...    23   6.9  
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    23   6.9  

>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = -3

Query: 152 LLLQFLHGTLGELGTCFSLSQFLREAVDLILDVLARRHRL 33
           L+LQ +   +GE GTC  +++     V+ I D LA+   L
Sbjct: 445 LILQQIRTIIGEAGTCRHVTEMAALVVNDI-DPLAKEEEL 483


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = +3

Query: 135  QKLQKEVDRLEDDLVAEREKSKLLQEEME 221
            ++++KEVD  EDD   E E+ +  ++E E
Sbjct: 955  KEVKKEVDAAEDDEEEEEEEQEEEEDEDE 983


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -1

Query: 271 LVRGARVHIFWMSWSVASI 215
           +  G +VHI W+S  VAS+
Sbjct: 331 IATGTQVHIAWVSRRVASL 349


>AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding
           protein AgamOBP45 protein.
          Length = 356

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 9/22 (40%), Positives = 10/22 (45%)
 Frame = +1

Query: 115 SSPSVPCRNCKRRSIGLKTIWW 180
           S P  P   C  R +GL   WW
Sbjct: 66  SFPDDPETKCLLRCVGLNLRWW 87


>AY146749-1|AAO12064.1|  336|Anopheles gambiae odorant-binding
           protein AgamOBP38 protein.
          Length = 336

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +1

Query: 139 NCKRRSIGLKTIWW 180
           NC  R IGL   WW
Sbjct: 68  NCLLRCIGLNARWW 81


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +3

Query: 159 RLEDDLVAEREKSKLLQE 212
           R +DDL  E  KSKLL E
Sbjct: 162 RSDDDLTMELVKSKLLDE 179


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 636,856
Number of Sequences: 2352
Number of extensions: 10959
Number of successful extensions: 17
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)