Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30166
(694 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M19714-1|AAA61226.1| 264|Homo sapiens TPM1 protein. 48 4e-05
BC007433-1|AAH07433.1| 284|Homo sapiens tropomyosin 1 (alpha) p... 48 4e-05
M19713-1|AAA61225.1| 284|Homo sapiens TPM1 protein. 46 1e-04
AY640415-1|AAT68295.1| 284|Homo sapiens tropomyosin alpha stria... 46 1e-04
AY640414-1|AAT68294.1| 284|Homo sapiens sarcomeric tropomyosin ... 46 1e-04
AK129882-1|BAC85248.1| 217|Homo sapiens protein ( Homo sapiens ... 46 1e-04
X06825-1|CAA29971.1| 284|Homo sapiens protein ( Human mRNA for ... 45 2e-04
M12126-1|AAA61229.1| 131|Homo sapiens TPM2 protein. 45 2e-04
AL133410-4|CAI10977.1| 284|Homo sapiens tropomyosin 2 (beta) pr... 45 2e-04
X04201-1|CAA27798.1| 285|Homo sapiens protein ( Human skeletal ... 44 5e-04
BC062740-1|AAH62740.1| 158|Homo sapiens TPM3 protein protein. 44 5e-04
BC008425-1|AAH08425.1| 285|Homo sapiens tropomyosin 3 protein. 44 5e-04
BC008407-1|AAH08407.1| 285|Homo sapiens tropomyosin 3 protein. 44 5e-04
AL590431-12|CAH71269.1| 284|Homo sapiens tropomyosin 3 protein. 44 5e-04
AL590431-11|CAH71270.1| 242|Homo sapiens tropomyosin 3 protein. 44 5e-04
AL590431-7|CAH71266.1| 248|Homo sapiens tropomyosin 3 protein. 44 5e-04
AL590431-4|CAH71262.1| 158|Homo sapiens tropomyosin 3 protein. 44 5e-04
AK092690-1|BAC03946.1| 243|Homo sapiens protein ( Homo sapiens ... 44 5e-04
AF474157-1|AAL84570.1| 247|Homo sapiens TPMsk3 protein. 44 7e-04
U94780-1|AAB86593.1| 804|Homo sapiens MEA6 protein. 31 5.2
U73682-1|AAB86589.1| 776|Homo sapiens meningioma-expressed anti... 31 5.2
BC064355-1|AAH64355.1| 809|Homo sapiens CTAGE5 protein protein. 31 5.2
BC051363-1|AAH51363.2| 729|Homo sapiens CTAGE family, member 5 ... 31 5.2
AL121586-7|CAB89415.1| 2442|Homo sapiens centrosomal protein 250... 31 5.2
AF338234-1|AAN77611.1| 771|Homo sapiens CTAGE-5B protein protein. 31 5.2
AF338233-1|AAN77610.1| 775|Homo sapiens CTAGE-5A protein protein. 31 5.2
AF049105-1|AAC07988.1| 2442|Homo sapiens centrosomal Nek2-associ... 31 5.2
AF022655-1|AAC06349.1| 2442|Homo sapiens cep250 centrosome assoc... 31 5.2
AB209528-1|BAD92765.1| 808|Homo sapiens CTAGE family, member 5 ... 31 5.2
BC119732-1|AAI19733.1| 145|Homo sapiens FKBP1A protein protein. 30 6.8
U71267-1|AAD00179.1| 642|Homo sapiens potential transcriptional... 30 9.0
D87469-1|BAA13407.2| 2854|Homo sapiens KIAA0279 protein protein. 30 9.0
DQ120669-1|ABB92450.1| 681|Homo sapiens rcCTAGE5 protein. 30 9.0
BC036527-1|AAH36527.1| 811|Homo sapiens CTAGEP protein protein. 30 9.0
AL390252-1|CAI13170.1| 2923|Homo sapiens cadherin, EGF LAG seven... 30 9.0
AF234887-1|AAG00080.1| 2923|Homo sapiens FLAMINGO 1 protein. 30 9.0
AB065955-1|BAC06168.1| 2923|Homo sapiens seven transmembrane hel... 30 9.0
>M19714-1|AAA61226.1| 264|Homo sapiens TPM1 protein.
Length = 264
Score = 47.6 bits (108), Expect = 4e-05
Identities = 24/66 (36%), Positives = 38/66 (57%)
Frame = +3
Query: 51 EHVEDKIHSLSQKLXXXXXXXXXXXXSVQKLQKEVDRLEDDLVAEREKSKLLQEEMEATL 230
+ E++I LS KL SV KL+K +D LED+L A++ K K + EE++ L
Sbjct: 199 DRYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHAL 258
Query: 231 HDIQNM 248
+D+ +M
Sbjct: 259 NDMTSM 264
>BC007433-1|AAH07433.1| 284|Homo sapiens tropomyosin 1 (alpha)
protein.
Length = 284
Score = 47.6 bits (108), Expect = 4e-05
Identities = 24/66 (36%), Positives = 38/66 (57%)
Frame = +3
Query: 51 EHVEDKIHSLSQKLXXXXXXXXXXXXSVQKLQKEVDRLEDDLVAEREKSKLLQEEMEATL 230
+ E++I LS KL SV KL+K +D LED+L A++ K K + EE++ L
Sbjct: 219 DRYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHAL 278
Query: 231 HDIQNM 248
+D+ +M
Sbjct: 279 NDMTSM 284
>M19713-1|AAA61225.1| 284|Homo sapiens TPM1 protein.
Length = 284
Score = 46.0 bits (104), Expect = 1e-04
Identities = 23/66 (34%), Positives = 38/66 (57%)
Frame = +3
Query: 51 EHVEDKIHSLSQKLXXXXXXXXXXXXSVQKLQKEVDRLEDDLVAEREKSKLLQEEMEATL 230
+ E++I LS KL SV KL+K +D LED+L A++ K K + EE++ L
Sbjct: 219 DRYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHAL 278
Query: 231 HDIQNM 248
+D+ ++
Sbjct: 279 NDMTSI 284
>AY640415-1|AAT68295.1| 284|Homo sapiens tropomyosin alpha striated
muscle isoform protein.
Length = 284
Score = 46.0 bits (104), Expect = 1e-04
Identities = 23/66 (34%), Positives = 38/66 (57%)
Frame = +3
Query: 51 EHVEDKIHSLSQKLXXXXXXXXXXXXSVQKLQKEVDRLEDDLVAEREKSKLLQEEMEATL 230
+ E++I LS KL SV KL+K +D LED+L A++ K K + EE++ L
Sbjct: 219 DRYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHAL 278
Query: 231 HDIQNM 248
+D+ ++
Sbjct: 279 NDMTSI 284
>AY640414-1|AAT68294.1| 284|Homo sapiens sarcomeric tropomyosin
kappa protein.
Length = 284
Score = 46.0 bits (104), Expect = 1e-04
Identities = 23/66 (34%), Positives = 38/66 (57%)
Frame = +3
Query: 51 EHVEDKIHSLSQKLXXXXXXXXXXXXSVQKLQKEVDRLEDDLVAEREKSKLLQEEMEATL 230
+ E++I LS KL SV KL+K +D LED+L A++ K K + EE++ L
Sbjct: 219 DRYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHAL 278
Query: 231 HDIQNM 248
+D+ ++
Sbjct: 279 NDMTSI 284
>AK129882-1|BAC85248.1| 217|Homo sapiens protein ( Homo sapiens
cDNA FLJ26372 fis, clone HRT06233. ).
Length = 217
Score = 46.0 bits (104), Expect = 1e-04
Identities = 23/66 (34%), Positives = 38/66 (57%)
Frame = +3
Query: 51 EHVEDKIHSLSQKLXXXXXXXXXXXXSVQKLQKEVDRLEDDLVAEREKSKLLQEEMEATL 230
+ E++I LS KL SV KL+K +D LED+L A++ K K + EE++ L
Sbjct: 152 DRYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHAL 211
Query: 231 HDIQNM 248
+D+ ++
Sbjct: 212 NDMTSI 217
>X06825-1|CAA29971.1| 284|Homo sapiens protein ( Human mRNA for
skeletal beta-tropomyosin. ).
Length = 284
Score = 45.2 bits (102), Expect = 2e-04
Identities = 22/63 (34%), Positives = 37/63 (58%)
Frame = +3
Query: 60 EDKIHSLSQKLXXXXXXXXXXXXSVQKLQKEVDRLEDDLVAEREKSKLLQEEMEATLHDI 239
E++I L +KL SV KL+K +D LED++ A++ K K + EE++ L+DI
Sbjct: 222 EEEIKLLEEKLKEAETRAEFAERSVAKLEKTIDDLEDEVYAQKMKYKAISEELDNALNDI 281
Query: 240 QNM 248
++
Sbjct: 282 TSL 284
>M12126-1|AAA61229.1| 131|Homo sapiens TPM2 protein.
Length = 131
Score = 45.2 bits (102), Expect = 2e-04
Identities = 22/63 (34%), Positives = 37/63 (58%)
Frame = +3
Query: 60 EDKIHSLSQKLXXXXXXXXXXXXSVQKLQKEVDRLEDDLVAEREKSKLLQEEMEATLHDI 239
E++I L +KL SV KL+K +D LED++ A++ K K + EE++ L+DI
Sbjct: 69 EEEIKLLEEKLKEAETRAEFAERSVAKLEKTIDDLEDEVYAQKMKYKAISEELDNALNDI 128
Query: 240 QNM 248
++
Sbjct: 129 TSL 131
>AL133410-4|CAI10977.1| 284|Homo sapiens tropomyosin 2 (beta)
protein.
Length = 284
Score = 45.2 bits (102), Expect = 2e-04
Identities = 22/63 (34%), Positives = 37/63 (58%)
Frame = +3
Query: 60 EDKIHSLSQKLXXXXXXXXXXXXSVQKLQKEVDRLEDDLVAEREKSKLLQEEMEATLHDI 239
E++I L +KL SV KL+K +D LED++ A++ K K + EE++ L+DI
Sbjct: 222 EEEIKLLEEKLKEAETRAEFAERSVAKLEKTIDDLEDEVYAQKMKYKAISEELDNALNDI 281
Query: 240 QNM 248
++
Sbjct: 282 TSL 284
>X04201-1|CAA27798.1| 285|Homo sapiens protein ( Human skeletal
muscle 1.3 kb mRNA for tropomyosin. ).
Length = 285
Score = 44.0 bits (99), Expect = 5e-04
Identities = 22/63 (34%), Positives = 37/63 (58%)
Frame = +3
Query: 60 EDKIHSLSQKLXXXXXXXXXXXXSVQKLQKEVDRLEDDLVAEREKSKLLQEEMEATLHDI 239
E++I L+ KL SV KL+K +D LED+L A++ K K + EE++ L+D+
Sbjct: 223 EEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDM 282
Query: 240 QNM 248
++
Sbjct: 283 TSI 285
>BC062740-1|AAH62740.1| 158|Homo sapiens TPM3 protein protein.
Length = 158
Score = 44.0 bits (99), Expect = 5e-04
Identities = 22/63 (34%), Positives = 37/63 (58%)
Frame = +3
Query: 60 EDKIHSLSQKLXXXXXXXXXXXXSVQKLQKEVDRLEDDLVAEREKSKLLQEEMEATLHDI 239
E++I L+ KL SV KL+K +D LED+L A++ K K + EE++ L+D+
Sbjct: 96 EEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDM 155
Query: 240 QNM 248
++
Sbjct: 156 TSI 158
>BC008425-1|AAH08425.1| 285|Homo sapiens tropomyosin 3 protein.
Length = 285
Score = 44.0 bits (99), Expect = 5e-04
Identities = 22/63 (34%), Positives = 37/63 (58%)
Frame = +3
Query: 60 EDKIHSLSQKLXXXXXXXXXXXXSVQKLQKEVDRLEDDLVAEREKSKLLQEEMEATLHDI 239
E++I L+ KL SV KL+K +D LED+L A++ K K + EE++ L+D+
Sbjct: 223 EEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDM 282
Query: 240 QNM 248
++
Sbjct: 283 TSI 285
>BC008407-1|AAH08407.1| 285|Homo sapiens tropomyosin 3 protein.
Length = 285
Score = 44.0 bits (99), Expect = 5e-04
Identities = 22/63 (34%), Positives = 37/63 (58%)
Frame = +3
Query: 60 EDKIHSLSQKLXXXXXXXXXXXXSVQKLQKEVDRLEDDLVAEREKSKLLQEEMEATLHDI 239
E++I L+ KL SV KL+K +D LED+L A++ K K + EE++ L+D+
Sbjct: 223 EEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDM 282
Query: 240 QNM 248
++
Sbjct: 283 TSI 285
>AL590431-12|CAH71269.1| 284|Homo sapiens tropomyosin 3 protein.
Length = 284
Score = 44.0 bits (99), Expect = 5e-04
Identities = 22/63 (34%), Positives = 37/63 (58%)
Frame = +3
Query: 60 EDKIHSLSQKLXXXXXXXXXXXXSVQKLQKEVDRLEDDLVAEREKSKLLQEEMEATLHDI 239
E++I L+ KL SV KL+K +D LED+L A++ K K + EE++ L+D+
Sbjct: 222 EEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDM 281
Query: 240 QNM 248
++
Sbjct: 282 TSI 284
>AL590431-11|CAH71270.1| 242|Homo sapiens tropomyosin 3 protein.
Length = 242
Score = 44.0 bits (99), Expect = 5e-04
Identities = 22/63 (34%), Positives = 37/63 (58%)
Frame = +3
Query: 60 EDKIHSLSQKLXXXXXXXXXXXXSVQKLQKEVDRLEDDLVAEREKSKLLQEEMEATLHDI 239
E++I L+ KL SV KL+K +D LED+L A++ K K + EE++ L+D+
Sbjct: 180 EEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDM 239
Query: 240 QNM 248
++
Sbjct: 240 TSI 242
>AL590431-7|CAH71266.1| 248|Homo sapiens tropomyosin 3 protein.
Length = 248
Score = 44.0 bits (99), Expect = 5e-04
Identities = 22/63 (34%), Positives = 37/63 (58%)
Frame = +3
Query: 60 EDKIHSLSQKLXXXXXXXXXXXXSVQKLQKEVDRLEDDLVAEREKSKLLQEEMEATLHDI 239
E++I L+ KL SV KL+K +D LED+L A++ K K + EE++ L+D+
Sbjct: 186 EEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDM 245
Query: 240 QNM 248
++
Sbjct: 246 TSI 248
>AL590431-4|CAH71262.1| 158|Homo sapiens tropomyosin 3 protein.
Length = 158
Score = 44.0 bits (99), Expect = 5e-04
Identities = 22/63 (34%), Positives = 37/63 (58%)
Frame = +3
Query: 60 EDKIHSLSQKLXXXXXXXXXXXXSVQKLQKEVDRLEDDLVAEREKSKLLQEEMEATLHDI 239
E++I L+ KL SV KL+K +D LED+L A++ K K + EE++ L+D+
Sbjct: 96 EEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDM 155
Query: 240 QNM 248
++
Sbjct: 156 TSI 158
>AK092690-1|BAC03946.1| 243|Homo sapiens protein ( Homo sapiens
cDNA FLJ35371 fis, clone SKMUS2001740, highly similar to
TROPOMYOSIN ALPHA CHAIN, SKELETAL MUSCLE TYPE. ).
Length = 243
Score = 44.0 bits (99), Expect = 5e-04
Identities = 22/63 (34%), Positives = 37/63 (58%)
Frame = +3
Query: 60 EDKIHSLSQKLXXXXXXXXXXXXSVQKLQKEVDRLEDDLVAEREKSKLLQEEMEATLHDI 239
E++I L+ KL SV KL+K +D LED+L A++ K K + EE++ L+D+
Sbjct: 181 EEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDM 240
Query: 240 QNM 248
++
Sbjct: 241 TSI 243
>AF474157-1|AAL84570.1| 247|Homo sapiens TPMsk3 protein.
Length = 247
Score = 43.6 bits (98), Expect = 7e-04
Identities = 22/60 (36%), Positives = 35/60 (58%)
Frame = +3
Query: 60 EDKIHSLSQKLXXXXXXXXXXXXSVQKLQKEVDRLEDDLVAEREKSKLLQEEMEATLHDI 239
E++I L+ KL SV KL+K +D LED+L A++ K K + EE++ L+D+
Sbjct: 186 EEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDM 245
>U94780-1|AAB86593.1| 804|Homo sapiens MEA6 protein.
Length = 804
Score = 30.7 bits (66), Expect = 5.2
Identities = 14/55 (25%), Positives = 28/55 (50%)
Frame = +3
Query: 78 LSQKLXXXXXXXXXXXXSVQKLQKEVDRLEDDLVAEREKSKLLQEEMEATLHDIQ 242
L +KL + K+ +++ ++L R+++K L+EE+E T+H Q
Sbjct: 396 LHRKLTVEENYRLEKEEKLSKVDEKISHATEELETYRKRAKDLEEELERTIHSYQ 450
>U73682-1|AAB86589.1| 776|Homo sapiens meningioma-expressed antigen
11 protein.
Length = 776
Score = 30.7 bits (66), Expect = 5.2
Identities = 14/55 (25%), Positives = 28/55 (50%)
Frame = +3
Query: 78 LSQKLXXXXXXXXXXXXSVQKLQKEVDRLEDDLVAEREKSKLLQEEMEATLHDIQ 242
L +KL + K+ +++ ++L R+++K L+EE+E T+H Q
Sbjct: 411 LHRKLTVEENYRLEKEEKLSKVDEKISHATEELETYRKRAKDLEEELERTIHSYQ 465
>BC064355-1|AAH64355.1| 809|Homo sapiens CTAGE5 protein protein.
Length = 809
Score = 30.7 bits (66), Expect = 5.2
Identities = 14/55 (25%), Positives = 28/55 (50%)
Frame = +3
Query: 78 LSQKLXXXXXXXXXXXXSVQKLQKEVDRLEDDLVAEREKSKLLQEEMEATLHDIQ 242
L +KL + K+ +++ ++L R+++K L+EE+E T+H Q
Sbjct: 401 LHRKLTVEENYRLEKEEKLSKVDEKISHATEELETYRKRAKDLEEELERTIHSYQ 455
>BC051363-1|AAH51363.2| 729|Homo sapiens CTAGE family, member 5
protein.
Length = 729
Score = 30.7 bits (66), Expect = 5.2
Identities = 14/55 (25%), Positives = 28/55 (50%)
Frame = +3
Query: 78 LSQKLXXXXXXXXXXXXSVQKLQKEVDRLEDDLVAEREKSKLLQEEMEATLHDIQ 242
L +KL + K+ +++ ++L R+++K L+EE+E T+H Q
Sbjct: 321 LHRKLTVEENYRLEKEEKLSKVDEKISHATEELETYRKRAKDLEEELERTIHSYQ 375
>AL121586-7|CAB89415.1| 2442|Homo sapiens centrosomal protein 250kDa
protein.
Length = 2442
Score = 30.7 bits (66), Expect = 5.2
Identities = 12/34 (35%), Positives = 24/34 (70%)
Frame = +3
Query: 141 LQKEVDRLEDDLVAEREKSKLLQEEMEATLHDIQ 242
LQK+V+ L+ LVA+ + +L+++E++ L + Q
Sbjct: 1008 LQKQVEDLKSQLVAQDDSQRLVEQEVQEKLRETQ 1041
>AF338234-1|AAN77611.1| 771|Homo sapiens CTAGE-5B protein protein.
Length = 771
Score = 30.7 bits (66), Expect = 5.2
Identities = 14/55 (25%), Positives = 28/55 (50%)
Frame = +3
Query: 78 LSQKLXXXXXXXXXXXXSVQKLQKEVDRLEDDLVAEREKSKLLQEEMEATLHDIQ 242
L +KL + K+ +++ ++L R+++K L+EE+E T+H Q
Sbjct: 396 LHRKLTVEENYRLEKEEKLSKVDEKISHATEELETYRKRAKDLEEELERTIHSYQ 450
>AF338233-1|AAN77610.1| 775|Homo sapiens CTAGE-5A protein protein.
Length = 775
Score = 30.7 bits (66), Expect = 5.2
Identities = 14/55 (25%), Positives = 28/55 (50%)
Frame = +3
Query: 78 LSQKLXXXXXXXXXXXXSVQKLQKEVDRLEDDLVAEREKSKLLQEEMEATLHDIQ 242
L +KL + K+ +++ ++L R+++K L+EE+E T+H Q
Sbjct: 367 LHRKLTVEENYRLEKEEKLSKVDEKISHATEELETYRKRAKDLEEELERTIHSYQ 421
>AF049105-1|AAC07988.1| 2442|Homo sapiens centrosomal Nek2-associated
protein 1 protein.
Length = 2442
Score = 30.7 bits (66), Expect = 5.2
Identities = 12/34 (35%), Positives = 24/34 (70%)
Frame = +3
Query: 141 LQKEVDRLEDDLVAEREKSKLLQEEMEATLHDIQ 242
LQK+V+ L+ LVA+ + +L+++E++ L + Q
Sbjct: 1008 LQKQVEDLKSQLVAQDDSQRLVEQEVQEKLRETQ 1041
>AF022655-1|AAC06349.1| 2442|Homo sapiens cep250 centrosome associated
protein protein.
Length = 2442
Score = 30.7 bits (66), Expect = 5.2
Identities = 12/34 (35%), Positives = 24/34 (70%)
Frame = +3
Query: 141 LQKEVDRLEDDLVAEREKSKLLQEEMEATLHDIQ 242
LQK+V+ L+ LVA+ + +L+++E++ L + Q
Sbjct: 1008 LQKQVEDLKSQLVAQDDSQRLVEQEVQEKLRETQ 1041
>AB209528-1|BAD92765.1| 808|Homo sapiens CTAGE family, member 5
isoform 1 variant protein.
Length = 808
Score = 30.7 bits (66), Expect = 5.2
Identities = 14/55 (25%), Positives = 28/55 (50%)
Frame = +3
Query: 78 LSQKLXXXXXXXXXXXXSVQKLQKEVDRLEDDLVAEREKSKLLQEEMEATLHDIQ 242
L +KL + K+ +++ ++L R+++K L+EE+E T+H Q
Sbjct: 400 LHRKLTVEENYRLEKEEKLSKVDEKISHATEELETYRKRAKDLEEELERTIHSYQ 454
>BC119732-1|AAI19733.1| 145|Homo sapiens FKBP1A protein protein.
Length = 145
Score = 30.3 bits (65), Expect = 6.8
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = -2
Query: 180 PPDRLQAYRPPFAVSARNARRTRHVLQLEPISARGCGSYPRRARETPSPSHTGRITDG 7
PP R + PP A AR+A +Q+E IS ++P+R +T +TG + DG
Sbjct: 16 PPGRCWS-TPPVAPPARSASAAAMGVQVETISPGDGRTFPKRG-QTCVVHYTGMLEDG 71
>U71267-1|AAD00179.1| 642|Homo sapiens potential transcriptional
repressor NOT4Hp protein.
Length = 642
Score = 29.9 bits (64), Expect = 9.0
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -2
Query: 234 RGAWPP-SPPAGVCSFRARPPDRLQAYRPP 148
R +W P PP+ SF + PP A+RPP
Sbjct: 597 RASWNPYPPPSNPSSFHSPPPGFQTAFRPP 626
>D87469-1|BAA13407.2| 2854|Homo sapiens KIAA0279 protein protein.
Length = 2854
Score = 29.9 bits (64), Expect = 9.0
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = -2
Query: 222 PPSPPAG--VCSFRARPPDRLQAYRPPFAVSARNARRTRHVLQLEPISARGCGSYPRRAR 49
P + PAG V S RA PD +A R + + A R+ L+P++ + R
Sbjct: 122 PENQPAGTPVASLRAIDPDEGEAGRLEYTMDALFDSRSNQFFSLDPVTG-AVTTAEELDR 180
Query: 48 ETPSPSHTGRIT 13
ET S +H R+T
Sbjct: 181 ETKS-THVFRVT 191
>DQ120669-1|ABB92450.1| 681|Homo sapiens rcCTAGE5 protein.
Length = 681
Score = 29.9 bits (64), Expect = 9.0
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +3
Query: 132 VQKLQKEVDRLEDDLVAEREKSKLLQEEMEATLHDIQ 242
+ K+ K++ +L R+++K L+EE+E T+H Q
Sbjct: 383 LSKVDKKISHATKELETYRQRAKDLEEELERTIHYYQ 419
>BC036527-1|AAH36527.1| 811|Homo sapiens CTAGEP protein protein.
Length = 811
Score = 29.9 bits (64), Expect = 9.0
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +3
Query: 132 VQKLQKEVDRLEDDLVAEREKSKLLQEEMEATLHDIQ 242
+ K+ K++ +L R+++K L+EE+E T+H Q
Sbjct: 412 LSKVDKKISHATKELETYRQRAKDLEEELERTIHYYQ 448
>AL390252-1|CAI13170.1| 2923|Homo sapiens cadherin, EGF LAG
seven-pass G-type receptor 2 (flamingo homolog,
Drosophila) protein.
Length = 2923
Score = 29.9 bits (64), Expect = 9.0
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = -2
Query: 222 PPSPPAG--VCSFRARPPDRLQAYRPPFAVSARNARRTRHVLQLEPISARGCGSYPRRAR 49
P + PAG V S RA PD +A R + + A R+ L+P++ + R
Sbjct: 191 PENQPAGTPVASLRAIDPDEGEAGRLEYTMDALFDSRSNQFFSLDPVTG-AVTTAEELDR 249
Query: 48 ETPSPSHTGRIT 13
ET S +H R+T
Sbjct: 250 ETKS-THVFRVT 260
>AF234887-1|AAG00080.1| 2923|Homo sapiens FLAMINGO 1 protein.
Length = 2923
Score = 29.9 bits (64), Expect = 9.0
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = -2
Query: 222 PPSPPAG--VCSFRARPPDRLQAYRPPFAVSARNARRTRHVLQLEPISARGCGSYPRRAR 49
P + PAG V S RA PD +A R + + A R+ L+P++ + R
Sbjct: 191 PENQPAGTPVASLRAIDPDEGEAGRLEYTMDALFDSRSNQFFSLDPVTG-AVTTAEELDR 249
Query: 48 ETPSPSHTGRIT 13
ET S +H R+T
Sbjct: 250 ETKS-THVFRVT 260
>AB065955-1|BAC06168.1| 2923|Homo sapiens seven transmembrane helix
receptor protein.
Length = 2923
Score = 29.9 bits (64), Expect = 9.0
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = -2
Query: 222 PPSPPAG--VCSFRARPPDRLQAYRPPFAVSARNARRTRHVLQLEPISARGCGSYPRRAR 49
P + PAG V S RA PD +A R + + A R+ L+P++ + R
Sbjct: 191 PENQPAGTPVASLRAIDPDEGEAGRLEYTMDALFDSRSNQFFSLDPVTG-AVTTAEELDR 249
Query: 48 ETPSPSHTGRIT 13
ET S +H R+T
Sbjct: 250 ETKS-THVFRVT 260
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,577,916
Number of Sequences: 237096
Number of extensions: 1747180
Number of successful extensions: 5164
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 4867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5163
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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