Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30165
(513 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118868-1|AAM50728.1| 156|Drosophila melanogaster GM26647p pro... 132 3e-31
AF216206-1|AAF65682.1| 156|Drosophila melanogaster ribosomal pr... 132 3e-31
AE014298-2436|AAN09413.1| 156|Drosophila melanogaster CG4464-PC... 132 3e-31
AE014298-2435|AAN09412.1| 156|Drosophila melanogaster CG4464-PB... 132 3e-31
AE014298-2434|AAF48633.1| 156|Drosophila melanogaster CG4464-PA... 132 3e-31
X73153-1|CAA51677.1| 156|Drosophila melanogaster ribosomal prot... 132 4e-31
AY119257-1|AAM51117.1| 155|Drosophila melanogaster SD22440p pro... 101 6e-22
AE014297-3411|AAN13960.1| 155|Drosophila melanogaster CG5338-PB... 101 6e-22
BT022757-1|AAY55173.1| 1257|Drosophila melanogaster LD10349p pro... 35 0.056
AE014134-2292|AAF53254.1| 1257|Drosophila melanogaster CG16974-P... 35 0.056
AY061381-1|AAL28929.1| 1071|Drosophila melanogaster LD30416p pro... 30 2.1
AE014134-3335|AAF53958.1| 982|Drosophila melanogaster CG12050-P... 30 2.1
>AY118868-1|AAM50728.1| 156|Drosophila melanogaster GM26647p
protein.
Length = 156
Score = 132 bits (319), Expect = 3e-31
Identities = 68/122 (55%), Positives = 82/122 (67%), Gaps = 1/122 (0%)
Frame = +3
Query: 6 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVR*CCH 185
M VTVKD++Q + K VA LKKTGK+KVP+ MD+VKTA+FKELAPYDPDWFYVR C
Sbjct: 1 MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVR-CAS 59
Query: 186 PSSYL-HSLTCWSQDCHQDLWWAQRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDR 362
+L H + +RNGV PSHFCR++ ARKALQ+LE +LVEK D
Sbjct: 60 ILRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEKHPDG 119
Query: 363 GR 368
GR
Sbjct: 120 GR 121
>AF216206-1|AAF65682.1| 156|Drosophila melanogaster ribosomal
protein S19 protein.
Length = 156
Score = 132 bits (319), Expect = 3e-31
Identities = 68/122 (55%), Positives = 82/122 (67%), Gaps = 1/122 (0%)
Frame = +3
Query: 6 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVR*CCH 185
M VTVKD++Q + K VA LKKTGK+KVP+ MD+VKTA+FKELAPYDPDWFYVR C
Sbjct: 1 MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVR-CAS 59
Query: 186 PSSYL-HSLTCWSQDCHQDLWWAQRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDR 362
+L H + +RNGV PSHFCR++ ARKALQ+LE +LVEK D
Sbjct: 60 ILRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEKHPDG 119
Query: 363 GR 368
GR
Sbjct: 120 GR 121
>AE014298-2436|AAN09413.1| 156|Drosophila melanogaster CG4464-PC,
isoform C protein.
Length = 156
Score = 132 bits (319), Expect = 3e-31
Identities = 68/122 (55%), Positives = 82/122 (67%), Gaps = 1/122 (0%)
Frame = +3
Query: 6 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVR*CCH 185
M VTVKD++Q + K VA LKKTGK+KVP+ MD+VKTA+FKELAPYDPDWFYVR C
Sbjct: 1 MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVR-CAS 59
Query: 186 PSSYL-HSLTCWSQDCHQDLWWAQRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDR 362
+L H + +RNGV PSHFCR++ ARKALQ+LE +LVEK D
Sbjct: 60 ILRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEKHPDG 119
Query: 363 GR 368
GR
Sbjct: 120 GR 121
>AE014298-2435|AAN09412.1| 156|Drosophila melanogaster CG4464-PB,
isoform B protein.
Length = 156
Score = 132 bits (319), Expect = 3e-31
Identities = 68/122 (55%), Positives = 82/122 (67%), Gaps = 1/122 (0%)
Frame = +3
Query: 6 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVR*CCH 185
M VTVKD++Q + K VA LKKTGK+KVP+ MD+VKTA+FKELAPYDPDWFYVR C
Sbjct: 1 MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVR-CAS 59
Query: 186 PSSYL-HSLTCWSQDCHQDLWWAQRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDR 362
+L H + +RNGV PSHFCR++ ARKALQ+LE +LVEK D
Sbjct: 60 ILRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEKHPDG 119
Query: 363 GR 368
GR
Sbjct: 120 GR 121
>AE014298-2434|AAF48633.1| 156|Drosophila melanogaster CG4464-PA,
isoform A protein.
Length = 156
Score = 132 bits (319), Expect = 3e-31
Identities = 68/122 (55%), Positives = 82/122 (67%), Gaps = 1/122 (0%)
Frame = +3
Query: 6 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVR*CCH 185
M VTVKD++Q + K VA LKKTGK+KVP+ MD+VKTA+FKELAPYDPDWFYVR C
Sbjct: 1 MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVR-CAS 59
Query: 186 PSSYL-HSLTCWSQDCHQDLWWAQRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDR 362
+L H + +RNGV PSHFCR++ ARKALQ+LE +LVEK D
Sbjct: 60 ILRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEKHPDG 119
Query: 363 GR 368
GR
Sbjct: 120 GR 121
>X73153-1|CAA51677.1| 156|Drosophila melanogaster ribosomal protein
S19 protein.
Length = 156
Score = 132 bits (318), Expect = 4e-31
Identities = 67/122 (54%), Positives = 82/122 (67%), Gaps = 1/122 (0%)
Frame = +3
Query: 6 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVR*CCH 185
M VTVKD++Q + K VA LKKTGK+KVP+ MD++KTA+FKELAPYDPDWFYVR C
Sbjct: 1 MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIIKTAKFKELAPYDPDWFYVR-CAS 59
Query: 186 PSSYL-HSLTCWSQDCHQDLWWAQRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDR 362
+L H + +RNGV PSHFCR++ ARKALQ+LE +LVEK D
Sbjct: 60 ILRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEKHPDG 119
Query: 363 GR 368
GR
Sbjct: 120 GR 121
>AY119257-1|AAM51117.1| 155|Drosophila melanogaster SD22440p
protein.
Length = 155
Score = 101 bits (242), Expect = 6e-22
Identities = 55/122 (45%), Positives = 73/122 (59%), Gaps = 1/122 (0%)
Frame = +3
Query: 6 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVR*CCH 185
M VTVK+++Q + K +AA LKK+GK+ VPE +KT +FKE AP D DWFY R C
Sbjct: 1 MPGVTVKEIDQHVLTKNMAAFLKKSGKIFVPEQAVYMKTGKFKETAPTDDDWFYTR-CAS 59
Query: 186 PSSYLHSLTCWSQDCHQDLW-WAQRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDR 362
+L+ + ++ +RNGV PS CRSS RKALQ+LEA +VE+ D
Sbjct: 60 IMRHLYLRSPAGVGAFTKVYSGRKRNGVRPSKHCRSSDGCIRKALQALEAANMVERHPDG 119
Query: 363 GR 368
GR
Sbjct: 120 GR 121
Score = 40.3 bits (90), Expect = 0.001
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Frame = +1
Query: 178 AAILRHIYIRSPVGVKTVTKIFGGR--NVMELHLHISAGHQAVLHARLCNRWRH*SLLRK 351
A+I+RH+Y+RSP GV TK++ GR N + H + + A +++ +
Sbjct: 58 ASIMRHLYLRSPAGVGAFTKVYSGRKRNGVRPSKHCRSSDGCIRKA--LQALEAANMVER 115
Query: 352 FRIVVAFLTTQGRRDLDRI 408
LT QG+R+LDRI
Sbjct: 116 HPDGGRKLTPQGQRNLDRI 134
>AE014297-3411|AAN13960.1| 155|Drosophila melanogaster CG5338-PB
protein.
Length = 155
Score = 101 bits (242), Expect = 6e-22
Identities = 55/122 (45%), Positives = 73/122 (59%), Gaps = 1/122 (0%)
Frame = +3
Query: 6 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVR*CCH 185
M VTVK+++Q + K +AA LKK+GK+ VPE +KT +FKE AP D DWFY R C
Sbjct: 1 MPGVTVKEIDQHVLTKNMAAFLKKSGKIFVPEQAVYMKTGKFKETAPTDDDWFYTR-CAS 59
Query: 186 PSSYLHSLTCWSQDCHQDLW-WAQRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDR 362
+L+ + ++ +RNGV PS CRSS RKALQ+LEA +VE+ D
Sbjct: 60 IMRHLYLRSPAGVGAFTKVYSGRKRNGVRPSKHCRSSDGCIRKALQALEAANMVERHPDG 119
Query: 363 GR 368
GR
Sbjct: 120 GR 121
Score = 40.3 bits (90), Expect = 0.001
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Frame = +1
Query: 178 AAILRHIYIRSPVGVKTVTKIFGGR--NVMELHLHISAGHQAVLHARLCNRWRH*SLLRK 351
A+I+RH+Y+RSP GV TK++ GR N + H + + A +++ +
Sbjct: 58 ASIMRHLYLRSPAGVGAFTKVYSGRKRNGVRPSKHCRSSDGCIRKA--LQALEAANMVER 115
Query: 352 FRIVVAFLTTQGRRDLDRI 408
LT QG+R+LDRI
Sbjct: 116 HPDGGRKLTPQGQRNLDRI 134
>BT022757-1|AAY55173.1| 1257|Drosophila melanogaster LD10349p protein.
Length = 1257
Score = 35.1 bits (77), Expect = 0.056
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = -1
Query: 474 TCCLAEAGLEKSPGGKKTPWSSDSVKVSSTL--CGEKCDHDPELSQQASMPPTIAKP 310
T L +A E G +TP S S + +S CG+ C +L+ AS+P T KP
Sbjct: 1196 TASLCKAEQEGDAGNSETPPSESSCESNSLAASCGDVCQVSSKLANDASLPSTPPKP 1252
>AE014134-2292|AAF53254.1| 1257|Drosophila melanogaster CG16974-PA
protein.
Length = 1257
Score = 35.1 bits (77), Expect = 0.056
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = -1
Query: 474 TCCLAEAGLEKSPGGKKTPWSSDSVKVSSTL--CGEKCDHDPELSQQASMPPTIAKP 310
T L +A E G +TP S S + +S CG+ C +L+ AS+P T KP
Sbjct: 1196 TASLCKAEQEGDAGNSETPPSESSCESNSLAASCGDVCQVSSKLANDASLPSTPPKP 1252
>AY061381-1|AAL28929.1| 1071|Drosophila melanogaster LD30416p protein.
Length = 1071
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/72 (23%), Positives = 33/72 (45%)
Frame = -1
Query: 348 SQQASMPPTIAKPCVQYCLMTCRNVKV*LHYVAPTKDLGDSLDSNR*ANVNMTKDGSINA 169
S A P + ++P ++ ++ +H + P + G+SL+ N V + ++NA
Sbjct: 895 SDDAPTPISFSQPAATDIIL--KHATFGIHVIKPQQASGESLEKNGPLIVGREEHSAVNA 952
Query: 168 HRTNQGHTEPAL 133
HT PA+
Sbjct: 953 FVNLSAHTMPAM 964
>AE014134-3335|AAF53958.1| 982|Drosophila melanogaster CG12050-PA
protein.
Length = 982
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/72 (23%), Positives = 33/72 (45%)
Frame = -1
Query: 348 SQQASMPPTIAKPCVQYCLMTCRNVKV*LHYVAPTKDLGDSLDSNR*ANVNMTKDGSINA 169
S A P + ++P ++ ++ +H + P + G+SL+ N V + ++NA
Sbjct: 806 SDDAPTPISFSQPAATDIIL--KHATFGIHVIKPQQASGESLEKNGPLIVGREEHSAVNA 863
Query: 168 HRTNQGHTEPAL 133
HT PA+
Sbjct: 864 FVNLSAHTMPAM 875
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,745,380
Number of Sequences: 53049
Number of extensions: 476503
Number of successful extensions: 1492
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1476
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1867000320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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