Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30163
         (475 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    21   4.4  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    21   5.8  

>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +1

Query: 289 FNAVVHNTAPTAAPTHVKAVPALQYYHH 372
           F A + + A T+ P H    P + Y HH
Sbjct: 146 FAASIFHAAATSLPLHYPPPPPV-YTHH 172


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 10/54 (18%), Positives = 22/54 (40%)
 Frame = -3

Query: 251 WSHQLRGRSMNPSQHHRRVPLVGTCCRRSDHQLLSSCTRTWGRQSPQLGELRFW 90
           W++  +  + NPS+ +  + +      R++   L   T+      P    + FW
Sbjct: 468 WTNFAKNGNPNPSEENPLINVTWKPVTRNEMNFLDIGTKLTTGVDPDSERMAFW 521


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,857
Number of Sequences: 336
Number of extensions: 1149
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11036865
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)