Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30162
(702 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_28916| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 2e-12
SB_38742| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 1e-11
SB_48525| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0) 62 6e-10
SB_25657| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0) 61 1e-09
SB_22158| Best HMM Match : Lipoprotein_15 (HMM E-Value=8.4) 59 4e-09
SB_18386| Best HMM Match : CH (HMM E-Value=2.8e-26) 35 0.056
SB_9009| Best HMM Match : Peptidase_C1 (HMM E-Value=5.9e-40) 32 0.52
SB_45827| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.68
SB_9657| Best HMM Match : P_proprotein (HMM E-Value=7.5e-29) 31 0.90
SB_44298| Best HMM Match : Herpes_US9 (HMM E-Value=8.9) 31 0.90
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 31 0.90
SB_18156| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45) 31 1.2
SB_4602| Best HMM Match : dsrm (HMM E-Value=5.9e-14) 30 1.6
SB_39661| Best HMM Match : KOW (HMM E-Value=1.1e-07) 30 2.1
SB_31213| Best HMM Match : SNF2_N (HMM E-Value=0) 30 2.1
SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_42467| Best HMM Match : Borrelia_orfA (HMM E-Value=1.7) 29 2.8
SB_30228| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_27728| Best HMM Match : F5_F8_type_C (HMM E-Value=1.7e-08) 29 3.6
SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27) 29 3.6
SB_37561| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_51974| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_40551| Best HMM Match : Extensin_2 (HMM E-Value=0.076) 29 4.8
SB_22851| Best HMM Match : Sad1_UNC (HMM E-Value=0) 29 4.8
SB_10326| Best HMM Match : CBM_14 (HMM E-Value=5.3e-15) 29 4.8
SB_56741| Best HMM Match : 7tm_1 (HMM E-Value=7.2e-07) 28 6.4
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 28 6.4
SB_39969| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_34413| Best HMM Match : Myosin_head (HMM E-Value=0) 28 6.4
SB_25437| Best HMM Match : F5_F8_type_C (HMM E-Value=1.9e-08) 28 6.4
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_52266| Best HMM Match : DUF1665 (HMM E-Value=1.3) 28 8.4
SB_33278| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_32428| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_17426| Best HMM Match : DUF292 (HMM E-Value=0) 28 8.4
SB_12656| Best HMM Match : CS (HMM E-Value=0.0018) 28 8.4
SB_6815| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_55021| Best HMM Match : EGF_CA (HMM E-Value=1.4013e-45) 28 8.4
SB_41631| Best HMM Match : Ank (HMM E-Value=0.00018) 28 8.4
SB_41173| Best HMM Match : Sas10_Utp3 (HMM E-Value=2.8) 28 8.4
SB_21715| Best HMM Match : Serglycin (HMM E-Value=0.054) 28 8.4
SB_20444| Best HMM Match : F-box (HMM E-Value=5.2) 28 8.4
>SB_28916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 807
Score = 70.1 bits (164), Expect = 2e-12
Identities = 31/65 (47%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Frame = +3
Query: 39 TKKWDEFGKCPYAYKGTQWVGYEDPRSVEIKMNWIKEKGYLGAMTWAIDMDDFKGLCGE- 215
TK D K PY Y G+QW+ Y+D S+ K+ IK++ LGAM WAID+DDF +CG+
Sbjct: 681 TKVTDNPAKAPYGYHGSQWIAYDDVTSLGRKVELIKKENLLGAMFWAIDLDDFGNVCGQG 740
Query: 216 ENPLI 230
+PL+
Sbjct: 741 AHPLM 745
>SB_38742| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 438
Score = 67.3 bits (157), Expect = 1e-11
Identities = 29/50 (58%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Frame = +3
Query: 69 PYAYK-GTQWVGYEDPRSVEIKMNWIKEKGYLGAMTWAIDMDDFKGLCGE 215
PY QWVGY+D SV+ K+N+IK+K LGAM WA+D+DDFKG CG+
Sbjct: 315 PYGVDVNNQWVGYDDVTSVQEKVNYIKKKSLLGAMFWAMDLDDFKGDCGQ 364
>SB_48525| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0)
Length = 569
Score = 61.7 bits (143), Expect = 6e-10
Identities = 31/66 (46%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Frame = +3
Query: 63 KCPYAYKGTQWVGYEDPRSVEIKMNW-IKEKGYLGAMTWAIDMDDFKG-LCGE-ENPLIK 233
K PY + G WVGY+D S+ +K+ IK KG GAM WAI +DDFKG CG+ PLI
Sbjct: 430 KAPYGHVGDLWVGYDDEYSLSLKVERVIKAKGMAGAMFWAIPLDDFKGQFCGKGPYPLIN 489
Query: 234 LLHKHM 251
+ +++
Sbjct: 490 AVKEYL 495
>SB_25657| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0)
Length = 829
Score = 60.9 bits (141), Expect = 1e-09
Identities = 28/67 (41%), Positives = 44/67 (65%), Gaps = 3/67 (4%)
Frame = +3
Query: 63 KCPYAYKGTQWVGYEDPRSVEIKM-NWIKEKGYLGAMTWAIDMDDFKG-LCGE-ENPLIK 233
K PY YKG WVG+++P+S+ K+ N +K+ G M WAID+DDF G CG+ + PL+
Sbjct: 706 KAPYGYKGHDWVGFDNPKSLIYKIDNVVKKNQLRGVMFWAIDLDDFSGEHCGQGKYPLMS 765
Query: 234 LLHKHMS 254
+ +++
Sbjct: 766 AVKNYLT 772
Score = 60.1 bits (139), Expect = 2e-09
Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
Frame = +3
Query: 69 PYAYKGTQWVGYEDPRSVEIKM-NWIKEKGYLGAMTWAIDMDDFKG-LCGE-ENPLIKLL 239
PY YKG W+G++DP S+ K+ N +K+ G M WAID+DDF G CG+ + PL+ +
Sbjct: 311 PYGYKGKDWIGFDDPNSLVYKIDNVVKKNQLRGVMFWAIDLDDFSGEHCGQGKYPLMSAV 370
Query: 240 HKHM 251
++
Sbjct: 371 KNYL 374
>SB_22158| Best HMM Match : Lipoprotein_15 (HMM E-Value=8.4)
Length = 184
Score = 58.8 bits (136), Expect = 4e-09
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 7/70 (10%)
Frame = +3
Query: 63 KCPYAYKGTQW----VGYEDPRSVEIKMNW-IKEKGYLGAMTWAIDMDDFKG-LCGEEN- 221
+ PY Y W VGY+D RS+++K+ IK KG GAM WA+D+DDF G CG+ N
Sbjct: 48 RAPYGYVKQDWADVWVGYDDERSLQLKVEEVIKAKGLAGAMFWALDLDDFDGSSCGKGNY 107
Query: 222 PLIKLLHKHM 251
PL+ + K++
Sbjct: 108 PLMNAVKKYL 117
>SB_18386| Best HMM Match : CH (HMM E-Value=2.8e-26)
Length = 589
Score = 35.1 bits (77), Expect = 0.056
Identities = 23/81 (28%), Positives = 39/81 (48%)
Frame = +1
Query: 184 IWTILRDYAARKIP*SSFCISI*ALHSPACAHWTRNSYSGMGASTFNSIRPI*G*SDSYH 363
I TI+R Y + + F I + S + + + +S S GA +P S H
Sbjct: 445 IITIIRHYLHYVVVINIFIIDMSISSSSSSSSSSSSSSSSTGAQLLTPSKP-----SSNH 499
Query: 364 NHHHRETDDNKNHREANYYHK 426
NH+HR ++N+R N++H+
Sbjct: 500 NHYHRRRHHHRNYRH-NHHHR 519
>SB_9009| Best HMM Match : Peptidase_C1 (HMM E-Value=5.9e-40)
Length = 251
Score = 31.9 bits (69), Expect = 0.52
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Frame = +1
Query: 367 HHHRETDDNKNHREANYYH--KTGEKNKRGFTMHTE 468
HH++ TDDN N+ N +H T + N F E
Sbjct: 9 HHNKNTDDNNNNNNNNIHHNKNTDDNNNNSFVKKCE 44
>SB_45827| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2047
Score = 31.5 bits (68), Expect = 0.68
Identities = 19/60 (31%), Positives = 26/60 (43%)
Frame = -3
Query: 685 IAKR*SFTLKDCPPVDTRIGTPVARSHIANTGYTLSCLVRKPSLQSTHIRIVDFVFRGVF 506
+ K SF ++D V I P I Y L+ R+ Q + I DFVF G+F
Sbjct: 463 VTKCFSFPIRDWFMVTEAISQPTEADKICMRTYALNQQQRRAKKQFEFLSIADFVFIGIF 522
>SB_9657| Best HMM Match : P_proprotein (HMM E-Value=7.5e-29)
Length = 1779
Score = 31.1 bits (67), Expect = 0.90
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +1
Query: 358 YHNHHHRETDDNKNHREANYYHKTGEKNKRGFTMHTE---EDFDINVRPEVRGTPHG 519
+ N H+R D N +HR +++HK K + T+ ++ D+ + +V G G
Sbjct: 341 HRNKHYRHHDRNHHHRHHHHHHKHHHKAANHHKLSTQKQRKNSDLKMEDDVMGNDVG 397
Score = 29.9 bits (64), Expect = 2.1
Identities = 10/41 (24%), Positives = 21/41 (51%)
Frame = +1
Query: 352 DSYHNHHHRETDDNKNHREANYYHKTGEKNKRGFTMHTEED 474
D H+H H +H+ AN++ + +K ++ + E+D
Sbjct: 350 DRNHHHRHHHHHHKHHHKAANHHKLSTQKQRKNSDLKMEDD 390
>SB_44298| Best HMM Match : Herpes_US9 (HMM E-Value=8.9)
Length = 138
Score = 31.1 bits (67), Expect = 0.90
Identities = 8/22 (36%), Positives = 16/22 (72%)
Frame = +1
Query: 358 YHNHHHRETDDNKNHREANYYH 423
YH+HHH + + +++H N++H
Sbjct: 45 YHHHHHHQHNHHQHHHHHNHHH 66
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 31.1 bits (67), Expect = 0.90
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +2
Query: 266 PPARTGHATPTPEWARPPSTPSDPSEGDP 352
PPAR G A P P +R P PS G P
Sbjct: 318 PPARMGTAPPPPPPSRSSQRPPPPSRGAP 346
>SB_18156| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 704
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/79 (24%), Positives = 29/79 (36%)
Frame = +1
Query: 388 DNKNHREANYYHKTGEKNKRGFTMHTEEDFDINVRPEVRGTPHGKRSRQCGCVYSEGTAY 567
D + E N N++G EE FD V TP CG Y +
Sbjct: 610 DGVDDIENNNLENVDNSNRKG--REREESFDATVAKHKTKTPSTVTCYICGRAYGSASIS 667
Query: 568 VPDKKECSQYWRCVNGRRE 624
+ +K+C + W ++E
Sbjct: 668 I-HEKQCQKKWEAHEAKKE 685
>SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45)
Length = 453
Score = 30.7 bits (66), Expect = 1.2
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +1
Query: 358 YHNHHHRETDDNKNHREANYYHKTGEKNKR 447
+H+HHH+ HR +++H E N+R
Sbjct: 321 HHHHHHQRHRHRHRHRHRHHHHHHHEYNRR 350
Score = 27.9 bits (59), Expect = 8.4
Identities = 9/37 (24%), Positives = 18/37 (48%)
Frame = +1
Query: 358 YHNHHHRETDDNKNHREANYYHKTGEKNKRGFTMHTE 468
+H+HHHR + +H + H+ +++ H E
Sbjct: 310 HHHHHHRHHHHHHHHHHQRHRHRHRHRHRHHHHHHHE 346
>SB_4602| Best HMM Match : dsrm (HMM E-Value=5.9e-14)
Length = 579
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = -2
Query: 182 YSPGHSPEVALLFDPVHLN-LHTTRIFVAHPL 90
+SPGH + LL P H+N +H T++ A PL
Sbjct: 191 HSPGHEGPLNLLKTPKHVNQVHITQVNTARPL 222
>SB_39661| Best HMM Match : KOW (HMM E-Value=1.1e-07)
Length = 487
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +2
Query: 248 YEPYTVPPARTGHATP-TPEWARPPSTPS 331
Y PYT P+ G+A P TP PP +P+
Sbjct: 328 YSPYTQSPSPAGYANPMTPGGGLPPVSPA 356
>SB_31213| Best HMM Match : SNF2_N (HMM E-Value=0)
Length = 919
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 352 DSYHNHHHRETDDNKNHREANYYHKTGEKNKRGFTMHTEE 471
D +H+HHH + HR ++ H T E + R + H+ E
Sbjct: 433 DQHHHHHHHHHHRHHKHRSSS-GHSTTEASGRRASDHSHE 471
>SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1831
Score = 29.5 bits (63), Expect = 2.8
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 565 YVPDKKECSQYWRCVNGRREFQFSCQPG 648
Y D ++CS++++C R F C PG
Sbjct: 790 YYADPRDCSRFYQCDAFHRAFLHRCSPG 817
>SB_42467| Best HMM Match : Borrelia_orfA (HMM E-Value=1.7)
Length = 810
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +1
Query: 355 SYHNHHHRETD-DNKNHREANYYHKTGEKNKRGFTMHTEEDFD 480
S H HH D + K+H ++N +H NK+ H+ D
Sbjct: 570 SAHKKHHTHIDPEKKHHTDSNKHHSDSPTNKKHKHKHSSPSQD 612
>SB_30228| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 82
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +1
Query: 364 NHHHRETDDNKNHREANYYHKTGEKNKRGFTMHTEEDFDINVRPE 498
N H R N N N +H +K KRG ++ T + + R E
Sbjct: 28 NGHQRNASWNANGTPDNSHHIHSDKLKRGCSLETSKPIKVRQRSE 72
>SB_27728| Best HMM Match : F5_F8_type_C (HMM E-Value=1.7e-08)
Length = 150
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +3
Query: 9 TEVDADGSGWTKKWDEFGKCPYAYKGTQWVGYED 110
T V G K W + + Y+Y G +W+GY D
Sbjct: 110 TGVATQGDVGNKYWVKNYRVVYSYDGLRWLGYRD 143
>SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27)
Length = 5087
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +1
Query: 352 DSYHNHHHRETDDNKNHREANYYHKTGEKNKRGFTMHTEEDFDINVRPEV 501
D H+HHH++T + ++ E Y+ G N + EE+ + +V V
Sbjct: 3208 DPNHHHHHQQTQQHDDNEEEVLYYDQGFDNPALEDICEEEEEEKDVDESV 3257
>SB_37561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1209
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +3
Query: 9 TEVDADGSGWTKKWDEFGKCPYAYKGTQWVGYED 110
T V G K W + + Y+Y G +W+GY D
Sbjct: 420 TGVATQGDVGNKYWVKNYRVVYSYDGLRWLGYRD 453
>SB_51974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3474
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 595 YWRCVNGRREFQFSCQPGDNLST*NFNVL 681
+ +CVN R ++ SC PG L++ NF L
Sbjct: 720 FQQCVNTRGSYKCSCNPGFVLASDNFGCL 748
>SB_40551| Best HMM Match : Extensin_2 (HMM E-Value=0.076)
Length = 1269
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = +1
Query: 343 G*SDSYHNHHHRETDD--NKNHREANYYHK-TGEKNKRGFTMHTEED 474
G S+ Y H + E ++ N+N N + +G + RG T H+ ED
Sbjct: 42 GISNGYEKHSNHENNEGRNRNDNRGNRASQDSGNRRDRGQTYHSRED 88
>SB_22851| Best HMM Match : Sad1_UNC (HMM E-Value=0)
Length = 1705
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Frame = +2
Query: 206 MRRGKSLDQASA*AYEPYTVPPARTGHATPTPEWARPPSTPSDP-SEGDP 352
+ + KSLD YT P P P PP TPS+ +GDP
Sbjct: 1624 LHKSKSLDTVPEDGMLNYTFLPPSAQKRNPIPTPPPPPPTPSNAWRKGDP 1673
>SB_10326| Best HMM Match : CBM_14 (HMM E-Value=5.3e-15)
Length = 134
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +1
Query: 541 CVYSEGTAYVPDKKECSQYWRCVNGRREFQFSCQPG 648
C AY+PD C Y+ C G + + C PG
Sbjct: 22 CADKPHGAYLPDSTSCQHYYHCTWG-KAVRKDCGPG 56
>SB_56741| Best HMM Match : 7tm_1 (HMM E-Value=7.2e-07)
Length = 276
Score = 28.3 bits (60), Expect = 6.4
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = -1
Query: 654 IVPRLTRELELPSPVHTSPILATLFLVWYVSRPFRVHT--SALSTSFSVGCSSNFRSHVD 481
++ L REL +PS + + A+ L VS+P T AL+ + C +N + +D
Sbjct: 71 LIISLARELRVPSNILLVTLAASDTLTGLVSQPAHAVTIIRALTQPYGKLCRTNAKLFID 130
Query: 480 VKVFFSV 460
+ +F++
Sbjct: 131 LCSYFTL 137
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 254 PYTVPPARTGHATPTPEWARPPSTPSDPS 340
P T PP +T P P+ PP TP+ PS
Sbjct: 301 PQTPPPPQT---PPPPQTPAPPQTPAPPS 326
>SB_39969| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 74
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +3
Query: 231 KLLHKHMSLTQSRLRALDTQLLLRNGRV 314
KL+H L Q RL+AL +L+L GRV
Sbjct: 22 KLVHALEKLLQERLQALGQELVLGQGRV 49
>SB_34413| Best HMM Match : Myosin_head (HMM E-Value=0)
Length = 650
Score = 28.3 bits (60), Expect = 6.4
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +1
Query: 358 YHNHHHRETDDNKNHREANYYH 423
+H+HHHR + H +YY+
Sbjct: 627 HHHHHHRRRRRRRRHHHYHYYY 648
>SB_25437| Best HMM Match : F5_F8_type_C (HMM E-Value=1.9e-08)
Length = 103
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 9 TEVDADGSGWTKKWDEFGKCPYAYKGTQWVGYED 110
T V G K W + + Y+Y G +W+GY+D
Sbjct: 63 TGVATQGYVGKKYWVKNYRVVYSYDGLRWLGYKD 96
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +2
Query: 254 PYTVPPARTGHATPTPEWARPPSTPSDPSEGDP 352
PY PP P P + PP+ P PS P
Sbjct: 115 PYPPPPNAPYPPPPNPPYPPPPNAPYPPSPNAP 147
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/33 (33%), Positives = 14/33 (42%)
Frame = +2
Query: 254 PYTVPPARTGHATPTPEWARPPSTPSDPSEGDP 352
PY PP P P + PP+ P+ P P
Sbjct: 194 PYPPPPNAPNPPPPNPPYPPPPNAPNPPYPPPP 226
>SB_52266| Best HMM Match : DUF1665 (HMM E-Value=1.3)
Length = 697
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = +2
Query: 251 EPYTVPPART-GHATPTPEWARPPSTPSDP 337
+P+ +PP R H P P+ + PP SDP
Sbjct: 113 KPFGMPPQRAVPHPRPAPKPSAPPQKYSDP 142
>SB_33278| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 925
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +2
Query: 248 YEPYTVPPARTGHATPTPEWARPPSTPS 331
Y PY P T H T TPE A+ +TPS
Sbjct: 676 YRPYAPRPTITVHPTATPEQAQ-TATPS 702
>SB_32428| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1128
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +2
Query: 266 PPARTGHATPTPEWARPPSTPSDPSEGD 349
PP T A P P PP+T S P+ D
Sbjct: 105 PPPATTSAPPPPTTTAPPATTSPPTTTD 132
>SB_17426| Best HMM Match : DUF292 (HMM E-Value=0)
Length = 249
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +2
Query: 251 EPYTVPPARTGHATPTPEWARPPSTPSDPSEGDP 352
+P ++PPA G P E PP+ P P+ P
Sbjct: 187 QPASMPPAYPGDHLPRKEQPGPPNLPPVPTNSLP 220
>SB_12656| Best HMM Match : CS (HMM E-Value=0.0018)
Length = 277
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = -1
Query: 639 TRELELPSPVHTSPILAT-LFLVWYVSRPFRVHTS 538
+R + PSP+H SP+ AT + Y+ PF +H S
Sbjct: 119 SRYIHPPSPLHPSPLPATSIPPSRYIHLPFPIHPS 153
>SB_6815| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 51
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +2
Query: 248 YEPYTVPPARTGHATPTPEWARPPSTPS 331
Y PY P T H T TPE A+ +TPS
Sbjct: 5 YRPYAPRPTITVHPTATPEQAQ-TATPS 31
>SB_55021| Best HMM Match : EGF_CA (HMM E-Value=1.4013e-45)
Length = 348
Score = 27.9 bits (59), Expect = 8.4
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +1
Query: 571 PDKKECSQYWRCVNGRREFQFSCQPG 648
PD+ +CS C+N ++ C+PG
Sbjct: 160 PDENDCSPDANCINKLSSYECVCKPG 185
>SB_41631| Best HMM Match : Ank (HMM E-Value=0.00018)
Length = 353
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +1
Query: 349 SDSYHNHHHRETDDNKNHREANYYHKTGEK 438
S Y +HHH + D ++HR+ K EK
Sbjct: 166 SREYDSHHHSDHRDEESHRDGRKRSKDYEK 195
>SB_41173| Best HMM Match : Sas10_Utp3 (HMM E-Value=2.8)
Length = 405
Score = 27.9 bits (59), Expect = 8.4
Identities = 22/91 (24%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Frame = +1
Query: 379 ETDDNKNHREANYYHKTG-EKNKRGFTMHTEEDFDINVRPEVRGTPHGKRSRQCGCVYSE 555
ETD NK HR + G +K K + ++ ++ + ++ + G + S+
Sbjct: 312 ETDGNKVHRSTSSISDDGHKKRKLQLEIDRLKEQELEYQKKIHALQKENVRLKSGSLQSQ 371
Query: 556 GTAYVPDKKECSQYWRCVNGRREFQF-SCQP 645
G K+ QY C R+FQ C P
Sbjct: 372 G----EPSKDLYQYATCTKKSRDFQVCECIP 398
>SB_21715| Best HMM Match : Serglycin (HMM E-Value=0.054)
Length = 1079
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/47 (25%), Positives = 20/47 (42%)
Frame = +1
Query: 358 YHNHHHRETDDNKNHREANYYHKTGEKNKRGFTMHTEEDFDINVRPE 498
+H+HHH + ++ HR +H K H +E+ D E
Sbjct: 648 HHHHHHHRSKKDRRHRNTKTHHAKHLKG-HSARKHRKENNDAETLEE 693
>SB_20444| Best HMM Match : F-box (HMM E-Value=5.2)
Length = 332
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -1
Query: 573 WYVSR-PFRVHTSALSTSFSVGCSSNFRSH 487
W V R P +HT+ ST ++G S F SH
Sbjct: 204 WQVGRTPMLMHTTENSTITAIGSSGRFTSH 233
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,041,994
Number of Sequences: 59808
Number of extensions: 503792
Number of successful extensions: 2241
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 1692
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2154
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1841633001
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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