Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30162
(702 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 23 3.7
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 22 4.9
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 22 4.9
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 22 6.5
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 22 6.5
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 22 6.5
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 22 6.5
AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein. 22 6.5
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 21 8.6
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 21 8.6
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 21 8.6
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 21 8.6
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 8.6
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 22.6 bits (46), Expect = 3.7
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -2
Query: 632 NWNSRRPFTHR 600
NWN R P THR
Sbjct: 319 NWNFRGPRTHR 329
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 4.9
Identities = 7/26 (26%), Positives = 16/26 (61%)
Frame = +1
Query: 349 SDSYHNHHHRETDDNKNHREANYYHK 426
+++ HN++++ +N N+ NY K
Sbjct: 86 NNTIHNNNYKYNYNNNNYNNNNYNKK 111
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 4.9
Identities = 7/26 (26%), Positives = 16/26 (61%)
Frame = +1
Query: 349 SDSYHNHHHRETDDNKNHREANYYHK 426
+++ HN++++ +N N+ NY K
Sbjct: 86 NNTIHNNNYKYNYNNNNYNNNNYNKK 111
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 6.5
Identities = 6/25 (24%), Positives = 17/25 (68%)
Frame = +1
Query: 349 SDSYHNHHHRETDDNKNHREANYYH 423
+++ HN++++ +N N+ + YY+
Sbjct: 87 NNTIHNNNYKYNYNNNNYNKKLYYN 111
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 6.5
Identities = 6/25 (24%), Positives = 17/25 (68%)
Frame = +1
Query: 349 SDSYHNHHHRETDDNKNHREANYYH 423
+++ HN++++ +N N+ + YY+
Sbjct: 87 NNTIHNNNYKYNYNNNNYNKKLYYN 111
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 6.5
Identities = 6/25 (24%), Positives = 17/25 (68%)
Frame = +1
Query: 349 SDSYHNHHHRETDDNKNHREANYYH 423
+++ HN++++ +N N+ + YY+
Sbjct: 87 NNTIHNNNYKYNYNNNNYNKKLYYN 111
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 6.5
Identities = 6/25 (24%), Positives = 17/25 (68%)
Frame = +1
Query: 349 SDSYHNHHHRETDDNKNHREANYYH 423
+++ HN++++ +N N+ + YY+
Sbjct: 87 NNTIHNNNYKYNYNNNNYNKKLYYN 111
>AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein.
Length = 615
Score = 21.8 bits (44), Expect = 6.5
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +2
Query: 260 TVPPARTGHATPTPEWARPPSTPSDP 337
T P + TG A T W +TP DP
Sbjct: 392 TGPLSSTGLAQVTGIWHSNLTTPDDP 417
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 8.6
Identities = 6/23 (26%), Positives = 15/23 (65%)
Frame = +1
Query: 355 SYHNHHHRETDDNKNHREANYYH 423
S +N+++ +N N+++ YY+
Sbjct: 92 SNYNNYNNNNYNNNNYKKLQYYN 114
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 8.6
Identities = 6/23 (26%), Positives = 15/23 (65%)
Frame = +1
Query: 355 SYHNHHHRETDDNKNHREANYYH 423
S +N+++ +N N+++ YY+
Sbjct: 92 SNYNNYNNNNYNNNNYKKLQYYN 114
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 8.6
Identities = 6/23 (26%), Positives = 15/23 (65%)
Frame = +1
Query: 355 SYHNHHHRETDDNKNHREANYYH 423
S +N+++ +N N+++ YY+
Sbjct: 92 SNYNNYNNNNYNNNNYKKLQYYN 114
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 8.6
Identities = 6/23 (26%), Positives = 15/23 (65%)
Frame = +1
Query: 355 SYHNHHHRETDDNKNHREANYYH 423
S +N+++ +N N+++ YY+
Sbjct: 92 SNYNNYNNNNYNNNNYKKLQYYN 114
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.4 bits (43), Expect = 8.6
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +2
Query: 461 TLKKTLTST*DRKFEEHPTEN 523
TL T T++ K HPT+N
Sbjct: 1373 TLTATTTNSLTMKVRPHPTDN 1393
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,747
Number of Sequences: 438
Number of extensions: 4682
Number of successful extensions: 21
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21561255
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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