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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30162
         (702 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g19810.1 68417.m02905 glycosyl hydrolase family 18 protein si...    53   2e-07
At4g19800.1 68417.m02904 glycosyl hydrolase family 18 protein si...    51   6e-07
At4g19770.1 68417.m02901 glycosyl hydrolase family 18 protein si...    47   1e-05
At4g19720.1 68417.m02896 glycosyl hydrolase family 18 protein si...    46   2e-05
At4g19750.1 68417.m02899 glycosyl hydrolase family 18 protein si...    46   2e-05
At4g19820.1 68417.m02906 glycosyl hydrolase family 18 protein si...    45   4e-05
At4g19760.1 68417.m02900 glycosyl hydrolase family 18 protein si...    42   4e-04
At5g19420.1 68418.m02314 zinc finger protein, putative / regulat...    36   0.026
At5g41510.1 68418.m05042 F-box family protein contains Pfam:PF00...    32   0.42 
At5g38060.1 68418.m04586 expressed protein  ; expression support...    32   0.42 
At2g45470.1 68415.m05655 fasciclin-like arabinogalactan-protein ...    32   0.42 
At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid t...    31   0.56 
At4g37270.1 68417.m05275 cadmium/zinc-transporting ATPase, putat...    31   0.74 
At2g15880.1 68415.m01820 leucine-rich repeat family protein / ex...    31   0.74 
At1g70460.1 68414.m08107 protein kinase, putative contains Pfam ...    30   1.3  
At5g63720.1 68418.m07998 hypothetical protein                          29   3.0  
At5g04470.1 68418.m00445 expressed protein                             29   3.9  
At1g79730.1 68414.m09300 hydroxyproline-rich glycoprotein family...    29   3.9  
At4g31430.2 68417.m04465 expressed protein                             28   5.2  
At4g31430.1 68417.m04464 expressed protein                             28   5.2  
At2g04620.1 68415.m00470 cation efflux family protein potential ...    28   5.2  
At1g79910.1 68414.m09336 expressed protein contains Pfam profile...    28   5.2  
At1g67180.1 68414.m07642 zinc finger (C3HC4-type RING finger) fa...    28   5.2  
At4g19730.1 68417.m02897 glycosyl hydrolase family 18 protein si...    28   6.9  
At4g19100.1 68417.m02818 expressed protein                             28   6.9  
At4g15200.1 68417.m02329 formin homology 2 domain-containing pro...    28   6.9  
At1g12330.1 68414.m01425 expressed protein                             28   6.9  
At4g11720.1 68417.m01870 hypothetical protein                          27   9.1  
At4g10640.1 68417.m01738 calmodulin-binding family protein conta...    27   9.1  
At2g41460.1 68415.m05122 apurinic endonuclease-redox protein / D...    27   9.1  
At2g01850.1 68415.m00118 xyloglucan:xyloglucosyl transferase / x...    27   9.1  
At1g31990.1 68414.m03934 expressed protein                             27   9.1  

>At4g19810.1 68417.m02905 glycosyl hydrolase family 18 protein
           similar to chitinase/lysozyme GI:467689 from [Nicotiana
           tabacum]
          Length = 379

 Score = 52.8 bits (121), Expect = 2e-07
 Identities = 19/45 (42%), Positives = 29/45 (64%)
 Frame = +3

Query: 72  YAYKGTQWVGYEDPRSVEIKMNWIKEKGYLGAMTWAIDMDDFKGL 206
           Y Y GT W+GY+D +S+  K+ + K++G LG  +W +  DD  GL
Sbjct: 314 YCYAGTNWIGYDDNQSIVTKVRYAKQRGLLGYFSWHVGADDNSGL 358


>At4g19800.1 68417.m02904 glycosyl hydrolase family 18 protein
           similar to chitinase, class V GI:899342 from [Nicotiana
           tabacum]
          Length = 398

 Score = 51.2 bits (117), Expect = 6e-07
 Identities = 26/81 (32%), Positives = 41/81 (50%)
 Frame = +3

Query: 30  SGWTKKWDEFGKCPYAYKGTQWVGYEDPRSVEIKMNWIKEKGYLGAMTWAIDMDDFKGLC 209
           +G TK  D+     Y Y GT W+GY+  +S+  K+ + K+KG LG  +W +  DD   L 
Sbjct: 278 NGATKVHDDMMVGDYCYAGTTWIGYDSEKSIVTKVIYAKQKGLLGYFSWHVGGDDNSELS 337

Query: 210 GEENPLIKLLHKHMSLTQSRL 272
              +    +L   MS   S++
Sbjct: 338 SAGSTPYHILILCMSWKYSKI 358


>At4g19770.1 68417.m02901 glycosyl hydrolase family 18 protein
           similar to chitinase, class V GI:899342 from [Nicotiana
           tabacum]
          Length = 261

 Score = 46.8 bits (106), Expect = 1e-05
 Identities = 17/41 (41%), Positives = 25/41 (60%)
 Frame = +3

Query: 72  YAYKGTQWVGYEDPRSVEIKMNWIKEKGYLGAMTWAIDMDD 194
           Y Y GT W+GY+   S+  K+ + K+KG LG  +W +  DD
Sbjct: 205 YCYAGTTWIGYDSEESIVTKVIYAKQKGLLGYFSWQVGGDD 245


>At4g19720.1 68417.m02896 glycosyl hydrolase family 18 protein
           similar to chitinase, class V GI:899342 from [Nicotiana
           tabacum]
          Length = 363

 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 19/45 (42%), Positives = 28/45 (62%)
 Frame = +3

Query: 72  YAYKGTQWVGYEDPRSVEIKMNWIKEKGYLGAMTWAIDMDDFKGL 206
           Y + GT  +GY+D +SV  K+ + K+KG LG  +W +  DD  GL
Sbjct: 298 YCFAGTSLIGYDDHQSVVAKVKYAKQKGLLGYFSWHVGADDNFGL 342


>At4g19750.1 68417.m02899 glycosyl hydrolase family 18 protein
           similar to chitinase, class V GI:899342 from [Nicotiana
           tabacum]
          Length = 362

 Score = 46.0 bits (104), Expect = 2e-05
 Identities = 19/45 (42%), Positives = 27/45 (60%)
 Frame = +3

Query: 72  YAYKGTQWVGYEDPRSVEIKMNWIKEKGYLGAMTWAIDMDDFKGL 206
           Y Y GT W+GY+D +S+  K+ + K KG LG  +W +  D   GL
Sbjct: 303 YCYVGTTWIGYDDNQSIVSKVRYAKLKGLLGYFSWHVGADYNCGL 347


>At4g19820.1 68417.m02906 glycosyl hydrolase family 18 protein
           similar to chitinase/lysozyme GI:467689 from [Nicotiana
           tabacum]
          Length = 366

 Score = 45.2 bits (102), Expect = 4e-05
 Identities = 16/41 (39%), Positives = 26/41 (63%)
 Frame = +3

Query: 72  YAYKGTQWVGYEDPRSVEIKMNWIKEKGYLGAMTWAIDMDD 194
           Y Y    W+GY+D +S+ +K+ + K++G LG  +W I  DD
Sbjct: 312 YCYAKKTWIGYDDNQSIVMKVKYAKQRGLLGYFSWHIGADD 352


>At4g19760.1 68417.m02900 glycosyl hydrolase family 18 protein
           similar to chitinase, class V GI:505267 from [Nicotiana
           tabacum]
          Length = 365

 Score = 41.9 bits (94), Expect = 4e-04
 Identities = 17/45 (37%), Positives = 25/45 (55%)
 Frame = +3

Query: 72  YAYKGTQWVGYEDPRSVEIKMNWIKEKGYLGAMTWAIDMDDFKGL 206
           Y Y G  W+GY+D +S+  K+ + K  G LG  +W +  D   GL
Sbjct: 313 YCYVGNTWIGYDDNQSIVYKVKYAKFTGLLGYFSWHVGADYNCGL 357


>At5g19420.1 68418.m02314 zinc finger protein, putative / regulator
           of chromosome condensation (RCC1) family protein similar
           to zinc finger protein [Arabidopsis thaliana]
           gi|15811367|gb|AAL08940
          Length = 1124

 Score = 35.9 bits (79), Expect = 0.026
 Identities = 26/81 (32%), Positives = 35/81 (43%)
 Frame = -2

Query: 671 KFHVERLSPG*HENWNSRRPFTHRQYWLHSFLSGT*AVPSEYTHPHCRLRFPWGVPRTSG 492
           K+  E  S G     NS R +T R   LHS  S   +   E ++ H RL  P+  P  +G
Sbjct: 155 KWRTESRSDGTPSEANSPRTYTRRSSPLHSPFSSNESFQKEGSN-HLRLHSPYESPPKNG 213

Query: 491 LTLMSKSSSVCMVKPLLFFSP 429
           +       S+  V P  FF P
Sbjct: 214 VDKAFSDMSLYAVPPKGFFPP 234


>At5g41510.1 68418.m05042 F-box family protein contains Pfam:PF00646
           F-box domain
          Length = 400

 Score = 31.9 bits (69), Expect = 0.42
 Identities = 19/64 (29%), Positives = 29/64 (45%)
 Frame = +1

Query: 403 REANYYHKTGEKNKRGFTMHTEEDFDINVRPEVRGTPHGKRSRQCGCVYSEGTAYVPDKK 582
           R  +Y++K  E+    F  +   DFD  +   +  TPH      C CV  +G  Y P K+
Sbjct: 164 RFLDYFYKAPEEE---FFWYEIYDFDSGLWTTLNVTPHWGIYSTCPCVSLKGNTYWPAKE 220

Query: 583 ECSQ 594
             +Q
Sbjct: 221 RSTQ 224


>At5g38060.1 68418.m04586 expressed protein  ; expression supported
           by MPSS
          Length = 134

 Score = 31.9 bits (69), Expect = 0.42
 Identities = 13/41 (31%), Positives = 18/41 (43%)
 Frame = +1

Query: 517 GKRSRQCGCVYSEGTAYVPDKKECSQYWRCVNGRREFQFSC 639
           G+  R+   VY+ GT   P+  +  QYW C      F   C
Sbjct: 84  GETKRKFESVYTGGTMDTPNSGKVLQYWHCCGSEDPFDSGC 124


>At2g45470.1 68415.m05655 fasciclin-like arabinogalactan-protein
           (FLA8)
          Length = 420

 Score = 31.9 bits (69), Expect = 0.42
 Identities = 18/42 (42%), Positives = 22/42 (52%)
 Frame = +2

Query: 215 GKSLDQASA*AYEPYTVPPARTGHATPTPEWARPPSTPSDPS 340
           GKS   + A A EP T P      A P+P  A PP+ P+D S
Sbjct: 333 GKSKSPSPAPAPEPVTAPTPSPADA-PSPTAASPPAPPTDES 373


>At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid
           transfer protein (LTP) family protein similar to
           SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
           Lycopersicon esculentum, proline-rich cell wall protein
           [Medicago sativa] GI:3818416; contains Pfam profile
           PF00234 Protease inhibitor/seed storage/LTP family
          Length = 334

 Score = 31.5 bits (68), Expect = 0.56
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = +2

Query: 254 PYTVPPARTGHATPTPEWARPPSTPSDPSEGDP 352
           P   PP +   +TP P    PPSTP  P+   P
Sbjct: 115 PIVKPPTKPPPSTPKPPTKPPPSTPKPPTTKPP 147


>At4g37270.1 68417.m05275 cadmium/zinc-transporting ATPase, putative
           (HMA1) contains InterPro accession IPR001757: ATPase,
           E1-E2 type; identical to Potential
           cadmium/zinc-transporting ATPase HMA1 (EC 3.6.3.3) (EC
           3.6.3.5) (Swiss-Prot:Q9M3H5) [Arabidopsis thaliana];
           identical to cDNA putative transcription factor (MYB73)
           mRNA, partial cds GI:3941503
          Length = 819

 Score = 31.1 bits (67), Expect = 0.74
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +1

Query: 352 DSYHNHHHRETDDNKNHREANYYH 423
           D +H+HHH +  D+ NH   ++ H
Sbjct: 66  DHHHDHHHDDEQDHHNHHHHHHQH 89


>At2g15880.1 68415.m01820 leucine-rich repeat family protein /
           extensin family protein similar to extensin-like protein
           [Lycopersicon esculentum] gi|5917664|gb|AAD55979;
           contains leucine-rich repeats, Pfam:PF00560; contains
           proline rich extensin domains, INTERPRO:IPR002965
          Length = 727

 Score = 31.1 bits (67), Expect = 0.74
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = +2

Query: 248 YEPYTVPPARTGHATPTPEWARPPSTPSDPSEGDP 352
           Y P  +PP  +   T TP  + PP TPS   E  P
Sbjct: 667 YSPPLLPPKMSSPPTQTPVNSPPPRTPSQTVEAPP 701


>At1g70460.1 68414.m08107 protein kinase, putative contains Pfam
           PF00069: Protein kinase domain
          Length = 710

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = +2

Query: 254 PYTVPPARTGHATPTPEWARPPSTPSDPSEGDP 352
           P   PP  + ++ P PE   PP  P+D  E  P
Sbjct: 106 PIDSPPPESTNSPPPPEVFEPPPPPADEDESPP 138


>At5g63720.1 68418.m07998 hypothetical protein 
          Length = 492

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 4/33 (12%)
 Frame = +1

Query: 358 YHNHHHRETDDNK----NHREANYYHKTGEKNK 444
           +H+HHH   D  K    N  ++ ++HK  EK+K
Sbjct: 373 HHHHHHHHHDKEKPSAWNKLQSKFHHKHQEKSK 405


>At5g04470.1 68418.m00445 expressed protein
          Length = 127

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +2

Query: 257 YTVPPARTGHATPTPEWARPPSTPS 331
           + +PP       P P+  RPPSTPS
Sbjct: 41  HKIPPTTATTPPPPPQKPRPPSTPS 65


>At1g79730.1 68414.m09300 hydroxyproline-rich glycoprotein family
           protein contains proline-rich extensin domains,
           INTERPRO:IPR002965
          Length = 589

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 12/35 (34%), Positives = 15/35 (42%)
 Frame = +2

Query: 248 YEPYTVPPARTGHATPTPEWARPPSTPSDPSEGDP 352
           Y P   PP++   A P P  + PP  P  P    P
Sbjct: 8   YPPLPQPPSQNSLAPPPPPPSLPPPVPPPPPSHQP 42


>At4g31430.2 68417.m04465 expressed protein
          Length = 574

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = -2

Query: 557 PSEYTHPHCRLRFPWGVPRTSGLTLMSKSSSVCMVKPL 444
           P +    + R R PWG P  + L   S SS+     PL
Sbjct: 213 PVDVAKSYMRARLPWGSPAANNLDFRSPSSARVQGTPL 250


>At4g31430.1 68417.m04464 expressed protein
          Length = 485

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = -2

Query: 557 PSEYTHPHCRLRFPWGVPRTSGLTLMSKSSSVCMVKPL 444
           P +    + R R PWG P  + L   S SS+     PL
Sbjct: 213 PVDVAKSYMRARLPWGSPAANNLDFRSPSSARVQGTPL 250


>At2g04620.1 68415.m00470 cation efflux family protein potential
           member of the cation diffusion facilitator (CDF) family,
           or cation efflux (CE) family, see PMID:11500563
          Length = 798

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +1

Query: 361 HNHHHRETDDNKNHREANYYH 423
           HNH H     + NH E N+ H
Sbjct: 613 HNHDHEHQSHSHNHEECNHNH 633



 Score = 27.5 bits (58), Expect = 9.1
 Identities = 13/50 (26%), Positives = 24/50 (48%)
 Frame = +1

Query: 361 HNHHHRETDDNKNHREANYYHKTGEKNKRGFTMHTEEDFDINVRPEVRGT 510
           H+H+H E + N +H   +   K+ +K  R    H  E   ++V  +  G+
Sbjct: 622 HSHNHEECNHNHDHHSDHQPEKSEKKEHRHID-HNMEGIFLHVLADTMGS 670


>At1g79910.1 68414.m09336 expressed protein contains Pfam profile:
           PF03398 eukaryotic protein of unknown function, DUF292
          Length = 381

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +1

Query: 358 YHNHHHRETDDNKNHREANYYHKTGEKNKRGFTMHTEED 474
           +H+H H ET++ K  +  +   KT EK +   + H  ED
Sbjct: 185 HHHHVHTETEEPKTEKTNSEPEKTMEK-RSSLSFHGRED 222


>At1g67180.1 68414.m07642 zinc finger (C3HC4-type RING finger)
           family protein / BRCT domain-containing protein contains
           Pfam domains PF00533: BRCA1 C Terminus (BRCT) domain and
           PF00097: Zinc finger, C3HC4 type (RING finger)
          Length = 453

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +1

Query: 364 NHHHRETDDNKNHREANYYHKTGEKNKRGFTMHTEE 471
           N+HH  +D+N+N  E   + +  ++N RGF     E
Sbjct: 200 NNHHDNSDENQN--ETQDHREPADENVRGFVFEQGE 233


>At4g19730.1 68417.m02897 glycosyl hydrolase family 18 protein
           similar to chitinase, class V GI:505267 from [Nicotiana
           tabacum]
          Length = 332

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +3

Query: 72  YAYKGTQWVGYEDPRSVEIKM 134
           Y +    W+GYED +SVE K+
Sbjct: 312 YCFAKKIWIGYEDTQSVEAKV 332


>At4g19100.1 68417.m02818 expressed protein
          Length = 214

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
 Frame = +1

Query: 196 LRDYAARKIP*SSFCISI*ALHSPACAHWTRNSYSGMG---ASTFNSIRPI*G-*SDSYH 363
           LRD    ++P S  CI+   +   A  H T NS  G G     T  S +P  G  SD   
Sbjct: 34  LRDKTKSQVPKSITCINRLEISRIAPLHATMNSPKGFGPPPKKTKKSKKPKPGNQSDEDD 93

Query: 364 NHHHRETDDNKNHRE 408
           +    + DD ++ RE
Sbjct: 94  DDEDEDDDDEEDERE 108


>At4g15200.1 68417.m02329 formin homology 2 domain-containing
           protein / FH2 domain-containing protein contains formin
           homology 2 domain, Pfam:PF02181
          Length = 600

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = +2

Query: 227 DQASA*AYEPYTVPPARTGHATPTPEWARPPSTPSDPSEGDP 352
           + +SA    P  +PP R+  A P P  A PP  P  P    P
Sbjct: 246 ESSSAAGLPPLKLPPGRS--APPPPPAAAPPPQPPPPPPPKP 285


>At1g12330.1 68414.m01425 expressed protein
          Length = 505

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
 Frame = +1

Query: 343 G*SDSYHNH-HHRETDDNKNHREA-NYYHKTGEKNKRGFTMHTEEDFD 480
           G S +  NH HHR T+ N NH+      H  G+   R    H + D D
Sbjct: 49  GGSSATPNHQHHRRTNSNNNHQHTLTPLHHNGKPQTR--KRHDDNDED 94


>At4g11720.1 68417.m01870 hypothetical protein
          Length = 658

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +1

Query: 361 HNHHHRETDDNKNHREANYYHK 426
           H+HHH+    + +HR  +  HK
Sbjct: 571 HHHHHKHRHHHNHHRRTHQRHK 592



 Score = 27.5 bits (58), Expect = 9.1
 Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 7/35 (20%)
 Frame = +1

Query: 361 HNHHHRETDD-------NKNHREANYYHKTGEKNK 444
           H HHH + DD        ++H +++YYH+    +K
Sbjct: 591 HKHHHGQDDDVLQKMMLERDHSDSHYYHQLHRVHK 625


>At4g10640.1 68417.m01738 calmodulin-binding family protein contains
           IQ calmodulin-binding motif, Pfam:PF00612
          Length = 423

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +1

Query: 367 HHHRETDDNKNHREANYYHKTGEKNKRGFTMHT 465
           HHH+ETD  +  ++   + KT  +       HT
Sbjct: 29  HHHKETDIKRKEKKGWIFRKTKLETTNSVLQHT 61


>At2g41460.1 68415.m05122 apurinic endonuclease-redox protein /
           DNA-(apurinic or apyrimidinic site) lyase identical to
           apurinic endonuclease-redox protein SP: P45951 from
           [Arabidopsis thaliana]
          Length = 536

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = +1

Query: 385 DDNKNHREANYYHKTGEKNKRGFTMHTEEDFDINV 489
           D N  H E + ++  G K   GFT+   + F  N+
Sbjct: 429 DLNCAHEEIDIFNPAGNKRSAGFTIEERQSFGANL 463


>At2g01850.1 68415.m00118 xyloglucan:xyloglucosyl transferase /
           xyloglucan endotransglycosylase / endo-xyloglucan
           transferase (EXGT-A3) identical to endoxyloglucan
           transferase [Arabidopsis thaliana] GI:5533313
          Length = 333

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -2

Query: 611 FTHRQYWLHSFLSGT*AVPSEYT 543
           F    Y+LH F S +  +PS+YT
Sbjct: 65  FVSNDYYLHGFFSASIKLPSDYT 87


>At1g31990.1 68414.m03934 expressed protein
          Length = 325

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
 Frame = +1

Query: 505 GTPHGKRSRQCGCVYSEGTAYVPDKKEC-SQYWRCVNGRR 621
           G  HG R R+    + + +A    KK+  S  WRC NG R
Sbjct: 232 GCLHGTRFRRWYSPFQKLSALAITKKDVISSSWRCFNGMR 271


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,939,915
Number of Sequences: 28952
Number of extensions: 355401
Number of successful extensions: 1522
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1228
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1490
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1506636208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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