Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30161
         (676 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q3DP00 Cluster: ABC transporter, ATP-binding protein; n...    38   0.22 
UniRef50_A6VL98 Cluster: Tripartite ATP-independent periplasmic ...    37   0.51 
UniRef50_UPI0000F219D1 Cluster: PREDICTED: hypothetical protein;...    34   2.7  
UniRef50_Q7KPI8 Cluster: Aminopeptidase-1; n=3; Caenorhabditis e...    33   4.8  
UniRef50_Q747Y4 Cluster: Putative uncharacterized protein; n=1; ...    33   6.3  
UniRef50_Q245H6 Cluster: Putative uncharacterized protein; n=1; ...    33   6.3  
UniRef50_A2E5Q6 Cluster: Beige/BEACH domain containing protein; ...    33   8.4  

>UniRef50_Q3DP00 Cluster: ABC transporter, ATP-binding protein; n=7;
           Streptococcus agalactiae|Rep: ABC transporter,
           ATP-binding protein - Streptococcus agalactiae 515
          Length = 282

 Score = 37.9 bits (84), Expect = 0.22
 Identities = 21/72 (29%), Positives = 35/72 (48%)
 Frame = +2

Query: 461 STNGILICKSHIMRDVNVIPRRLKVVRRGPEIKIGNFPNAGSSISLGKHWPLTENMPVFV 640
           STN I+I  +HI+ DV  + + + V++ G  I+ GN      +I  GK W +T    +  
Sbjct: 176 STNKIIILSTHIVSDVEAVAKEIIVLKNGKFIEHGNTAQLLKTIE-GKVWEITTEPGLSQ 234

Query: 641 TPDFVSTDSDFF 676
            P+    +   F
Sbjct: 235 IPNIAIVNEKVF 246


>UniRef50_A6VL98 Cluster: Tripartite ATP-independent periplasmic
           transporter DctQ component precursor; n=1;
           Actinobacillus succinogenes 130Z|Rep: Tripartite
           ATP-independent periplasmic transporter DctQ component
           precursor - Actinobacillus succinogenes 130Z
          Length = 169

 Score = 36.7 bits (81), Expect = 0.51
 Identities = 16/46 (34%), Positives = 29/46 (63%)
 Frame = +2

Query: 137 IFLNIPGGLIFFNLRRKIIFVSGLIWSDRNDVSSQVFKYLVHISNV 274
           + L +   L+FFN+  +  F SGL+WS+  +VS  VF Y++++  +
Sbjct: 18  VMLAVMIALVFFNVILRFFFNSGLVWSE--EVSRYVFVYVIYLGAI 61


>UniRef50_UPI0000F219D1 Cluster: PREDICTED: hypothetical protein;
           n=3; Danio rerio|Rep: PREDICTED: hypothetical protein -
           Danio rerio
          Length = 682

 Score = 34.3 bits (75), Expect = 2.7
 Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
 Frame = -2

Query: 258 TRYLNTWLETSLRSLQISPDTK---IILRRRLKNISPPGMFKNIKDVNSTNTSDNQLIKL 88
           T  +NT L++S  ++++S D K    I  RR+  I  PG +K     + +N S  QLI+ 
Sbjct: 100 TSVINTVLQSSETAVKVSTDVKTEGFIDGRRICLIESPGWWKTFNLTDLSNISKQQLIRR 159

Query: 87  VSRLA 73
           +S ++
Sbjct: 160 ISLIS 164


>UniRef50_Q7KPI8 Cluster: Aminopeptidase-1; n=3; Caenorhabditis
           elegans|Rep: Aminopeptidase-1 - Caenorhabditis elegans
          Length = 609

 Score = 33.5 bits (73), Expect = 4.8
 Identities = 17/45 (37%), Positives = 24/45 (53%)
 Frame = -2

Query: 138 IKDVNSTNTSDNQLIKLVSRLAEADRETATSSIPYHTMTGAL*TI 4
           ++ VN     D++  KLV  L  AD + A SS+PY   +  L TI
Sbjct: 353 VRTVNDVFGPDHEYTKLVQNLGNADPDDAFSSVPYEKGSALLFTI 397


>UniRef50_Q747Y4 Cluster: Putative uncharacterized protein; n=1;
           Geobacter sulfurreducens|Rep: Putative uncharacterized
           protein - Geobacter sulfurreducens
          Length = 1175

 Score = 33.1 bits (72), Expect = 6.3
 Identities = 21/80 (26%), Positives = 45/80 (56%), Gaps = 6/80 (7%)
 Frame = -2

Query: 318 QNIHSNILNGVRVHVTLDMCTRYLNTWLETSLRSLQISPDTKI---ILRR---RLKNISP 157
           + +H  IL+GVR+ +  D    +    L T ++  + +PDT+I   ++RR    ++    
Sbjct: 111 RTLHRIILDGVRLTLVRDRSGTWNLARLATGMKGKKPAPDTRIGEVVVRRGSLAVEGHRM 170

Query: 156 PGMFKNIKDVNSTNTSDNQL 97
            G+  N++D+++  T+D++L
Sbjct: 171 EGIDLNLRDLSTQGTTDSRL 190


>UniRef50_Q245H6 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1610

 Score = 33.1 bits (72), Expect = 6.3
 Identities = 23/72 (31%), Positives = 34/72 (47%)
 Frame = -2

Query: 255 RYLNTWLETSLRSLQISPDTKIILRRRLKNISPPGMFKNIKDVNSTNTSDNQLIKLVSRL 76
           + +N  L T+L   Q S +    +  R+K I    +F+  + V S   SDNQ  +L    
Sbjct: 56  KIINDELITTLSESQTSSE---FIEERIKEIIENQLFQEKEQVISKLASDNQAFQLKIEQ 112

Query: 75  AEADRETATSSI 40
            E D +T  SSI
Sbjct: 113 LEIDNQTLASSI 124


>UniRef50_A2E5Q6 Cluster: Beige/BEACH domain containing protein; n=1;
            Trichomonas vaginalis G3|Rep: Beige/BEACH domain
            containing protein - Trichomonas vaginalis G3
          Length = 2367

 Score = 32.7 bits (71), Expect = 8.4
 Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
 Frame = -2

Query: 324  WYQNIHSNILNGVRVHVTLDMCTRYLNTWLETSLRSLQISPDT----KIILRRR---LKN 166
            W QN    +    +V +  ++ ++ +N W++T+  SLQ SP T    KII + +    KN
Sbjct: 2002 WAQNSFDFVYKHRKV-LECELVSKQINKWIDTTFGSLQKSPPTNYPPKIIFKSKHPQRKN 2060

Query: 165  ISPP 154
            I PP
Sbjct: 2061 IPPP 2064


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 711,083,058
Number of Sequences: 1657284
Number of extensions: 14798088
Number of successful extensions: 33173
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 32145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33169
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52066120554
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)