Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30160
         (835 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           27   0.53 
U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    25   2.1  
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    25   2.1  
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    25   2.1  
AY994093-1|AAX86006.1|   45|Anopheles gambiae metallothionein 1 ...    25   3.8  
AY745207-1|AAU93474.1|  103|Anopheles gambiae cytochrome P450 pr...    24   6.6  
AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.           23   8.7  

>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 27.5 bits (58), Expect = 0.53
 Identities = 15/36 (41%), Positives = 22/36 (61%)
 Frame = -2

Query: 576 SAEPXTSSGRTHWLGSQSGALFGSSSTVQAFSSDSS 469
           SA+P  +SG + W+ S +G++ G SS   A  S SS
Sbjct: 213 SADPSRNSGPSSWM-SGAGSVGGPSSAAAAMLSASS 247


>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +3

Query: 135 LISCATVDPPMNISVSPPKXLP 200
           LISCA+    M +SV PP  +P
Sbjct: 571 LISCASSSISMALSVGPPVVIP 592


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +3

Query: 135 LISCATVDPPMNISVSPPKXLP 200
           LISCA+    M +SV PP  +P
Sbjct: 571 LISCASSSISMALSVGPPVVIP 592


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +3

Query: 135 LISCATVDPPMNISVSPPKXLP 200
           LISCA+    M +SV PP  +P
Sbjct: 549 LISCASSSISMALSVGPPVVIP 570


>AY994093-1|AAX86006.1|   45|Anopheles gambiae metallothionein 1
           protein.
          Length = 45

 Score = 24.6 bits (51), Expect = 3.8
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +3

Query: 360 EPICPEGKLACGSGDCIEKEFG 425
           +P   + K AC SG C EK  G
Sbjct: 20  QPCATDCKCACASGGCKEKSGG 41


>AY745207-1|AAU93474.1|  103|Anopheles gambiae cytochrome P450
           protein.
          Length = 103

 Score = 23.8 bits (49), Expect = 6.6
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +2

Query: 539 QCVLPELVSGSAERY 583
           QCV P LV G+ E Y
Sbjct: 27  QCVFPNLVLGTMEEY 41


>AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.
          Length = 165

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 14/49 (28%), Positives = 19/49 (38%)
 Frame = -2

Query: 549 RTHWLGSQSGALFGSSSTVQAFSSDSSLQSGYH*KPPKGGKNQILFQCN 403
           RT   GS S    GSSS       + +  S YH  P     +    +C+
Sbjct: 41  RTASTGSASSGHSGSSSLYDRVPREHATSSPYHAPPSPANSHYEPMECH 89


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 892,064
Number of Sequences: 2352
Number of extensions: 19747
Number of successful extensions: 32
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 88065063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)