Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30158
         (742 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK093052-1|BAC04036.1|  279|Homo sapiens protein ( Homo sapiens ...    33   1.4  
AK075522-1|BAC11668.1|  365|Homo sapiens protein ( Homo sapiens ...    32   2.5  
AK092094-1|BAC03803.1|  138|Homo sapiens protein ( Homo sapiens ...    30   7.6  

>AK093052-1|BAC04036.1|  279|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35733 fis, clone TESTI2003277, weakly similar to
           ANTER-SPECIFIC PROLINE-RICH PROTEIN APG PRECURSOR. ).
          Length = 279

 Score = 32.7 bits (71), Expect = 1.4
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = -1

Query: 157 SGMRWPDAA*PQGWPRSPGVVSAVVSPNGPCRWARRHCGHAPDS 26
           +G R P    P  WP SPG  SA+   +GPC  +    G +P++
Sbjct: 188 AGPRHPTG--PWTWPPSPGCTSAMARRSGPCVASGSAAGSSPEA 229


>AK075522-1|BAC11668.1|  365|Homo sapiens protein ( Homo sapiens
           cDNA PSEC0220 fis, clone HEMBA1005301, highly similar to
           Wnt-6 protein precursor. ).
          Length = 365

 Score = 31.9 bits (69), Expect = 2.5
 Identities = 15/44 (34%), Positives = 16/44 (36%)
 Frame = -1

Query: 160 CSGMRWPDAA*PQGWPRSPGVVSAVVSPNGPCRWARRHCGHAPD 29
           C   RW     P G P +PG      SP G   W    CG   D
Sbjct: 134 CQAPRWRAPPRPSGLPGTPGPPGPAGSPEGSAAWEWGGCGDDVD 177


>AK092094-1|BAC03803.1|  138|Homo sapiens protein ( Homo sapiens
           cDNA FLJ34775 fis, clone NT2NE2003315. ).
          Length = 138

 Score = 30.3 bits (65), Expect = 7.6
 Identities = 18/55 (32%), Positives = 27/55 (49%)
 Frame = +2

Query: 2   KKLKKKLDAVWSMSAVAASPSTWSVWRDYCRNNSGRARPALRLSRIRPSHSAASE 166
           ++ ++    VW+ +  AA P +    R   R+  GRA  ALR +R RP H    E
Sbjct: 71  RRRRRGRGGVWAPARWAAEPLSGPARRR--RSRGGRAGTALRAARARPRHLTRRE 123


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,028,712
Number of Sequences: 237096
Number of extensions: 2370683
Number of successful extensions: 11198
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10545
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11198
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8847149012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)