Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30158
         (742 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D84348-1|BAA21712.1|  219|Drosophila melanogaster rab-related pr...    29   5.0  
D43795-1|BAA07853.1|  519|Drosophila melanogaster CP-1 protein.        29   5.0  
AY071400-1|AAL49022.1|  219|Drosophila melanogaster RE48347p pro...    29   5.0  
AE014296-1412|AAF50452.1|  219|Drosophila melanogaster CG7062-PA...    29   5.0  
AE013599-26|EAA46003.3| 2077|Drosophila melanogaster CG17704-PF,...    29   6.6  
AE013599-25|EAA46004.3| 2077|Drosophila melanogaster CG17704-PE,...    29   6.6  

>D84348-1|BAA21712.1|  219|Drosophila melanogaster rab-related
           protein 3 protein.
          Length = 219

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
 Frame = +3

Query: 192 GFHISYESSKRSSRFNGRIVRYWLELLRKYFNEDV-ITIVGSP-SIEMQEKMAEEEKRRI 365
           G  I Y+ +KRSS  N   ++ W+E +R+Y   +V I +VG+   +E Q ++  EE R++
Sbjct: 96  GVLIVYDITKRSSFSN---LQKWIEEVRRYTASNVLIILVGNKCDLEEQREVDFEEARQM 152


>D43795-1|BAA07853.1|  519|Drosophila melanogaster CP-1 protein.
          Length = 519

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 16/35 (45%), Positives = 19/35 (54%)
 Frame = -1

Query: 181 VSTESLRCSGMRWPDAA*PQGWPRSPGVVSAVVSP 77
           VS+ SL  SG  W +A   + WPR P VV   V P
Sbjct: 143 VSSSSLS-SGRPWAEAERVRRWPRRPAVVPRGVEP 176


>AY071400-1|AAL49022.1|  219|Drosophila melanogaster RE48347p
           protein.
          Length = 219

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
 Frame = +3

Query: 192 GFHISYESSKRSSRFNGRIVRYWLELLRKYFNEDV-ITIVGSP-SIEMQEKMAEEEKRRI 365
           G  I Y+ +KRSS  N   ++ W+E +R+Y   +V I +VG+   +E Q ++  EE R++
Sbjct: 96  GVLIVYDITKRSSFSN---LQKWIEEVRRYTASNVLIILVGNKCDLEEQREVDFEEARQM 152


>AE014296-1412|AAF50452.1|  219|Drosophila melanogaster CG7062-PA
           protein.
          Length = 219

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
 Frame = +3

Query: 192 GFHISYESSKRSSRFNGRIVRYWLELLRKYFNEDV-ITIVGSP-SIEMQEKMAEEEKRRI 365
           G  I Y+ +KRSS  N   ++ W+E +R+Y   +V I +VG+   +E Q ++  EE R++
Sbjct: 96  GVLIVYDITKRSSFSN---LQKWIEEVRRYTASNVLIILVGNKCDLEEQREVDFEEARQM 152


>AE013599-26|EAA46003.3| 2077|Drosophila melanogaster CG17704-PF,
           isoform F protein.
          Length = 2077

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = -1

Query: 313 EPTIVITSSLKYLRKSSNQYLTILPLNLEDLFEDS 209
           EPT    SS++YL+K  +Q L +  LN + + E++
Sbjct: 296 EPTQAHHSSIEYLKKKKSQILDVSILNRQQVLENT 330


>AE013599-25|EAA46004.3| 2077|Drosophila melanogaster CG17704-PE,
           isoform E protein.
          Length = 2077

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = -1

Query: 313 EPTIVITSSLKYLRKSSNQYLTILPLNLEDLFEDS 209
           EPT    SS++YL+K  +Q L +  LN + + E++
Sbjct: 296 EPTQAHHSSIEYLKKKKSQILDVSILNRQQVLENT 330


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,954,466
Number of Sequences: 53049
Number of extensions: 693096
Number of successful extensions: 1941
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1786
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1941
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3355404063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)