Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30158
         (742 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    25   0.99 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   3.0  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   5.3  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    21   9.2  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 24.6 bits (51), Expect = 0.99
 Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
 Frame = -2

Query: 516 NSQTAPGRPPACPPVEQL---INDSPQNFXPFF 427
           NSQ APG+ P  P   Q+   +N + ++  PF+
Sbjct: 579 NSQQAPGQSPDWPSTSQIQRGVNAAIRSQEPFY 611


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 13/27 (48%), Positives = 13/27 (48%)
 Frame = -1

Query: 565 ASRPRCSRSKME*HLREFADGTGTAAS 485
           AS P CS    E     FA G  TAAS
Sbjct: 890 ASTPGCSSKNGEPTSAAFAQGFATAAS 916


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 11/42 (26%), Positives = 21/42 (50%)
 Frame = -1

Query: 418 CLAFSARPFSPNKARWSSILRFSSSAIFSCISMLGEPTIVIT 293
           C  +S++   P ++ +SS+LR+  S           P+I I+
Sbjct: 367 CGKWSSQKSEPRRSIYSSLLRYPRSIFRQTDDHQNSPSIFIS 408


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -1

Query: 160 CSGMRWPDAA 131
           C GMRWP  A
Sbjct: 88  CCGMRWPGDA 97


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,967
Number of Sequences: 438
Number of extensions: 4210
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23144850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)