Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30157
(567 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 99 6e-20
UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 93 4e-18
UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 85 1e-15
UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brug... 78 1e-13
UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; L... 73 4e-12
UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, pu... 73 5e-12
UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 72 1e-11
UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 70 4e-11
UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 69 6e-11
UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 66 5e-10
UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomo... 65 1e-09
UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal... 65 1e-09
UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b... 64 2e-09
UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 59 6e-08
UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiell... 58 1e-07
UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 56 4e-07
UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 56 6e-07
UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 50 4e-05
UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 43 0.006
UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryar... 41 0.023
UniRef50_UPI00015B613E Cluster: PREDICTED: similar to frazzled p... 36 0.50
UniRef50_UPI0000DB7FD0 Cluster: PREDICTED: similar to roundabout... 36 0.50
UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3; Archaea... 36 0.50
UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;... 36 0.66
UniRef50_UPI0000E47A9F Cluster: PREDICTED: hypothetical protein;... 35 1.2
UniRef50_UPI000058888F Cluster: PREDICTED: similar to ENSANGP000... 35 1.2
UniRef50_Q7S3X5 Cluster: Putative uncharacterized protein NCU022... 35 1.5
UniRef50_UPI0000DD86E0 Cluster: PREDICTED: hypothetical protein;... 34 2.0
UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarc... 34 2.7
UniRef50_P33433 Cluster: Histidine-rich glycoprotein; n=4; Bos t... 34 2.7
UniRef50_Q0J0G9 Cluster: Os09g0510000 protein; n=1; Oryza sativa... 33 3.5
UniRef50_A7QMM2 Cluster: Chromosome chr19 scaffold_126, whole ge... 33 3.5
UniRef50_A5AYB9 Cluster: Putative uncharacterized protein; n=1; ... 33 3.5
UniRef50_UPI00015B4B32 Cluster: PREDICTED: hypothetical protein;... 33 4.7
UniRef50_A6NR78 Cluster: Putative uncharacterized protein; n=1; ... 33 4.7
UniRef50_Q5NB71 Cluster: Putative uncharacterized protein P0431F... 33 4.7
UniRef50_UPI0001555B12 Cluster: PREDICTED: similar to myosin IB,... 33 6.2
UniRef50_UPI0000F212F9 Cluster: PREDICTED: hypothetical protein;... 33 6.2
UniRef50_A5UPY3 Cluster: HAD-superfamily hydrolase, subfamily IA... 33 6.2
UniRef50_A5NZ94 Cluster: Crotonyl-CoA reductase precursor; n=1; ... 33 6.2
UniRef50_A3RRP8 Cluster: Putative uncharacterized protein; n=1; ... 33 6.2
UniRef50_A0GGU8 Cluster: Putative uncharacterized protein; n=1; ... 33 6.2
UniRef50_A7F232 Cluster: Putative uncharacterized protein; n=1; ... 33 6.2
UniRef50_Q1J406 Cluster: Hydrogenase accessory protein HypB; n=4... 32 8.1
UniRef50_A5E904 Cluster: Putative uncharacterized protein; n=1; ... 32 8.1
UniRef50_A0H6N2 Cluster: 200 kDa antigen p200, putative; n=3; Co... 32 8.1
UniRef50_Q16SY7 Cluster: Membrane associated guanylate kinase in... 32 8.1
UniRef50_A0BK90 Cluster: Chromosome undetermined scaffold_111, w... 32 8.1
>UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70;
Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens
(Human)
Length = 427
Score = 99.1 bits (236), Expect = 6e-20
Identities = 53/110 (48%), Positives = 63/110 (57%)
Frame = +2
Query: 59 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 238
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 239 HQTSADHGVLDVLSPEFXXXXXXXXXXXXXXXXXTCVVGGRMFAPTKPWR 388
HQTSA+ GGRMFAPTK WR
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWR 109
Score = 78.2 bits (184), Expect = 1e-13
Identities = 34/39 (87%), Positives = 34/39 (87%)
Frame = +1
Query: 256 SWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGWTYVRP 372
SWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG P
Sbjct: 66 SWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAP 104
>UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96;
Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila
melanogaster (Fruit fly)
Length = 401
Score = 93.1 bits (221), Expect = 4e-18
Identities = 52/112 (46%), Positives = 63/112 (56%)
Frame = +2
Query: 53 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 232
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60
Query: 233 AGHQTSADHGVLDVLSPEFXXXXXXXXXXXXXXXXXTCVVGGRMFAPTKPWR 388
AGHQTSA+ GGRMFAPTK +R
Sbjct: 61 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFR 112
>UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2;
Sclerotiniaceae|Rep: 60S ribosomal protein L4 -
Sclerotinia sclerotiorum 1980
Length = 373
Score = 85.0 bits (201), Expect = 1e-15
Identities = 47/107 (43%), Positives = 54/107 (50%)
Frame = +2
Query: 68 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQT 247
+RP VSV S T G PLP VF +PIRPD+V VH M+KN RQPY VS++AGHQT
Sbjct: 3 SRPTVSVLSADG-TATGTTIPLPKVFTSPIRPDIVQTVHTGMAKNKRQPYAVSEKAGHQT 61
Query: 248 SADHGVLDVLSPEFXXXXXXXXXXXXXXXXXTCVVGGRMFAPTKPWR 388
SA+ GRMFAPTK WR
Sbjct: 62 SAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVWR 108
>UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brugia
malayi (Filarial nematode worm)
Length = 306
Score = 78.2 bits (184), Expect = 1e-13
Identities = 34/39 (87%), Positives = 34/39 (87%)
Frame = +1
Query: 256 SWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGWTYVRP 372
SWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG P
Sbjct: 183 SWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAP 221
Score = 75.8 bits (178), Expect = 7e-13
Identities = 43/101 (42%), Positives = 53/101 (52%)
Frame = +2
Query: 86 VYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSADHGV 265
VY++KSE + LP VF+AP+RPD+V+ VH + KN RQPY VS EAGHQTSA+
Sbjct: 127 VYNDKSEPTDTQIR-LPGVFRAPLRPDIVSFVHDQIRKNKRQPYAVSVEAGHQTSAESWG 185
Query: 266 LDVLSPEFXXXXXXXXXXXXXXXXXTCVVGGRMFAPTKPWR 388
GGRMFAPTK +R
Sbjct: 186 TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKVFR 226
>UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1;
Leishmania major strain Friedlin|Rep: Ribosomal protein
L1a, putative - Leishmania major strain Friedlin
Length = 432
Score = 73.3 bits (172), Expect = 4e-12
Identities = 45/107 (42%), Positives = 54/107 (50%)
Frame = +2
Query: 68 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQT 247
ARP VSVYS S++V G PLP VF APIR D+V VH +M+KNSRQ Y V++ +G
Sbjct: 3 ARPSVSVYSASSDSVVGTC-PLPAVFTAPIRSDIVKFVHTNMAKNSRQAYAVNRLSGMNH 61
Query: 248 SADHGVLDVLSPEFXXXXXXXXXXXXXXXXXTCVVGGRMFAPTKPWR 388
SA GGRMFAPTK +R
Sbjct: 62 SAHSWGTGRAVARIPRISGGGTSTSGAGAFGNMCRGGRMFAPTKIFR 108
Score = 66.9 bits (156), Expect = 3e-10
Identities = 29/39 (74%), Positives = 30/39 (76%)
Frame = +1
Query: 256 SWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGWTYVRP 372
SWGTGRAVARIPR+ GGGT SG GAFGNMCRG P
Sbjct: 65 SWGTGRAVARIPRISGGGTSTSGAGAFGNMCRGGRMFAP 103
>UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=2; Theileria|Rep: 60S ribosomal subunit
protein L4/L1, putative - Theileria annulata
Length = 426
Score = 72.9 bits (171), Expect = 5e-12
Identities = 45/109 (41%), Positives = 58/109 (53%), Gaps = 1/109 (0%)
Frame = +2
Query: 65 VARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 244
V RP+VSV+S +E G+ +P VF P+R DLV+ VH +MSKN RQ Y +S+ +G+Q
Sbjct: 2 VHRPVVSVFSVSTEKRMGSTI-MPRVFSTPLRSDLVHYVHTNMSKNKRQAYAISRMSGYQ 60
Query: 245 TSA-DHGVLDVLSPEFXXXXXXXXXXXXXXXXXTCVVGGRMFAPTKPWR 388
TSA G LS C GG MFAPT+ WR
Sbjct: 61 TSARSWGTGRALSRTPRVKGGGTHRSGQAAYANFCRAGG-MFAPTRTWR 108
Score = 61.7 bits (143), Expect = 1e-08
Identities = 24/32 (75%), Positives = 28/32 (87%)
Frame = +1
Query: 256 SWGTGRAVARIPRVRGGGTHRSGQGAFGNMCR 351
SWGTGRA++R PRV+GGGTHRSGQ A+ N CR
Sbjct: 65 SWGTGRALSRTPRVKGGGTHRSGQAAYANFCR 96
>UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L4/L1, putative - Plasmodium chabaudi
Length = 411
Score = 71.7 bits (168), Expect = 1e-11
Identities = 31/39 (79%), Positives = 32/39 (82%)
Frame = +1
Query: 256 SWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGWTYVRP 372
SWGTGRAVARIPRV GGGTHR+GQ AFGNMCRG P
Sbjct: 66 SWGTGRAVARIPRVPGGGTHRAGQAAFGNMCRGGGMFNP 104
Score = 62.9 bits (146), Expect = 5e-09
Identities = 37/110 (33%), Positives = 50/110 (45%)
Frame = +2
Query: 59 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 238
++ RPL +VY + V G + +P VF+ PIR DL+ + +MSKN R PY V AG
Sbjct: 1 MATIRPLANVYGINGKKVVGEVE-IPVVFQTPIRHDLIEYIFSNMSKNIRHPYAVKLGAG 59
Query: 239 HQTSADHGVLDVLSPEFXXXXXXXXXXXXXXXXXTCVVGGRMFAPTKPWR 388
++TSA+ GG MF PTK WR
Sbjct: 60 YETSAESWGTGRAVARIPRVPGGGTHRAGQAAFGNMCRGGGMFNPTKIWR 109
>UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 69.7 bits (163), Expect = 4e-11
Identities = 30/39 (76%), Positives = 31/39 (79%)
Frame = +1
Query: 256 SWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGWTYVRP 372
SWGTGRAVARIPRV GGGTHR+GQ AFGNMCR P
Sbjct: 42 SWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAP 80
>UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4;
Cryptosporidium|Rep: 60S ribosomal protein-like,
putative - Cryptosporidium parvum Iowa II
Length = 394
Score = 69.3 bits (162), Expect = 6e-11
Identities = 40/110 (36%), Positives = 53/110 (48%)
Frame = +2
Query: 59 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 238
++ ARP+VSV+ T ++ PLP VF +P+R DLV V +MSKN RQ Y VS +AG
Sbjct: 1 MTFARPIVSVFPSNDSTKATSSIPLPTVFVSPLRHDLVRYVFTNMSKNKRQAYGVSTKAG 60
Query: 239 HQTSADHGVLDVLSPEFXXXXXXXXXXXXXXXXXTCVVGGRMFAPTKPWR 388
HQ SA+ GG MF+P K +R
Sbjct: 61 HQHSAESWGTGRAVARIPRVSASGTSRSGQGAFGNMCRGGHMFSPNKTYR 110
Score = 67.7 bits (158), Expect = 2e-10
Identities = 30/41 (73%), Positives = 32/41 (78%)
Frame = +1
Query: 256 SWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGWTYVRPHE 378
SWGTGRAVARIPRV GT RSGQGAFGNMCRG P++
Sbjct: 67 SWGTGRAVARIPRVSASGTSRSGQGAFGNMCRGGHMFSPNK 107
>UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2;
Oligohymenophorea|Rep: Ribosomal protein L4, putative -
Paramecium tetraurelia
Length = 406
Score = 66.1 bits (154), Expect = 5e-10
Identities = 28/32 (87%), Positives = 28/32 (87%)
Frame = +1
Query: 256 SWGTGRAVARIPRVRGGGTHRSGQGAFGNMCR 351
SWGTGRAVARIPRV G GTHRSGQ AFGN CR
Sbjct: 67 SWGTGRAVARIPRVSGSGTHRSGQAAFGNQCR 98
Score = 61.3 bits (142), Expect = 2e-08
Identities = 31/62 (50%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Frame = +2
Query: 74 PLVSVYSEKSET-VQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTS 250
PLVSV+S T V PLP VF+ PIRPD+V+ VH +++KN RQ + V+ +AG Q S
Sbjct: 5 PLVSVFSADDSTKVTAKHIPLPAVFQTPIRPDIVSFVHTNIAKNRRQAHAVNPQAGMQHS 64
Query: 251 AD 256
A+
Sbjct: 65 AE 66
>UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2;
Cryptomonadaceae|Rep: 60s ribosomal protein L1 -
Guillardia theta (Cryptomonas phi)
Length = 255
Score = 64.9 bits (151), Expect = 1e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +1
Query: 256 SWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGWTYVRP 372
SWGTGRAV+R+PRV G GTHRSGQGA N CRG P
Sbjct: 61 SWGTGRAVSRVPRVPGSGTHRSGQGAIANFCRGGRIFNP 99
Score = 45.2 bits (102), Expect = 0.001
Identities = 33/87 (37%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
Frame = +2
Query: 131 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSA-DHGVLDVLSPEFXXXXXX 307
+P VF + IR D+V VH +M KN RQ Y VS AG TSA G +S
Sbjct: 19 IPKVFFSKIRVDIVRFVHKNMCKNKRQVYAVSSTAGMGTSAVSWGTGRAVSRVPRVPGSG 78
Query: 308 XXXXXXXXXXXTCVVGGRMFAPTKPWR 388
C GGR+F PT WR
Sbjct: 79 THRSGQGAIANFC-RGGRIFNPTTIWR 104
>UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 -
Encephalitozoon cuniculi
Length = 335
Score = 64.9 bits (151), Expect = 1e-09
Identities = 26/39 (66%), Positives = 30/39 (76%)
Frame = +1
Query: 256 SWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGWTYVRP 372
SWGTGRA+AR+PRV+GGGT R+GQGAF N CR P
Sbjct: 63 SWGTGRAIARVPRVKGGGTRRAGQGAFANFCRKGRMAHP 101
Score = 43.6 bits (98), Expect = 0.003
Identities = 25/59 (42%), Positives = 31/59 (52%)
Frame = +2
Query: 80 VSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAD 256
++ Y TV+ LP VF PIR DLV + +RQPY VSK AG Q SA+
Sbjct: 5 INCYEADGVTVKKTLD-LPEVFSVPIRQDLVLKTYSLYRMKTRQPYAVSKNAGMQHSAE 62
>UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia
bovis|Rep: Ribosomal protein RPL4A - Babesia bovis
Length = 360
Score = 64.1 bits (149), Expect = 2e-09
Identities = 43/107 (40%), Positives = 54/107 (50%), Gaps = 1/107 (0%)
Frame = +2
Query: 71 RPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTS 250
RP VSV++ GA +P VF AP+R DLV VH +MSKN RQ Y VSK +G+QTS
Sbjct: 4 RPEVSVHNATDGERVGATL-MPKVFSAPLRLDLVRIVHTNMSKNRRQAYAVSKMSGYQTS 62
Query: 251 A-DHGVLDVLSPEFXXXXXXXXXXXXXXXXXTCVVGGRMFAPTKPWR 388
A G ++ C GG M+APT+ WR
Sbjct: 63 ARSWGTGRAMARVPRVKGGGTHRAGQAAYANFCRAGG-MYAPTRVWR 108
Score = 63.3 bits (147), Expect = 4e-09
Identities = 24/32 (75%), Positives = 29/32 (90%)
Frame = +1
Query: 256 SWGTGRAVARIPRVRGGGTHRSGQGAFGNMCR 351
SWGTGRA+AR+PRV+GGGTHR+GQ A+ N CR
Sbjct: 65 SWGTGRAMARVPRVKGGGTHRAGQAAYANFCR 96
>UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L4 - Entamoeba histolytica HM-1:IMSS
Length = 431
Score = 59.3 bits (137), Expect = 6e-08
Identities = 25/32 (78%), Positives = 28/32 (87%)
Frame = +1
Query: 256 SWGTGRAVARIPRVRGGGTHRSGQGAFGNMCR 351
SWGTGRAVARIPR+ G G+ R+GQGAFGNM R
Sbjct: 66 SWGTGRAVARIPRISGSGSGRNGQGAFGNMTR 97
Score = 52.4 bits (120), Expect = 7e-06
Identities = 28/62 (45%), Positives = 39/62 (62%)
Frame = +2
Query: 68 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQT 247
+RP V++Y + + LP VF APIR D+V+ V+ + SKN+RQP VS +AG Q
Sbjct: 3 SRPFVTIYDGITGEAEKTQVRLPAVFLAPIRGDVVHFVYRNQSKNTRQPEGVSTKAGKQH 62
Query: 248 SA 253
SA
Sbjct: 63 SA 64
>UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiella
natans|Rep: Ribosomal protein L4A - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 278
Score = 58.0 bits (134), Expect = 1e-07
Identities = 22/33 (66%), Positives = 27/33 (81%)
Frame = +1
Query: 256 SWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG 354
SWG GR +ARIPR++G GT ++GQGA NMCRG
Sbjct: 67 SWGPGRGLARIPRIKGSGTRKAGQGALANMCRG 99
>UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 -
Streblomastix strix
Length = 492
Score = 56.4 bits (130), Expect = 4e-07
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = +1
Query: 256 SWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG 354
SWGTGRAVAR+PR+ G GT R+GQ AF N RG
Sbjct: 66 SWGTGRAVARVPRISGSGTSRNGQAAFANSARG 98
Score = 49.6 bits (113), Expect = 5e-05
Identities = 31/104 (29%), Positives = 46/104 (44%)
Frame = +2
Query: 77 LVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAD 256
L +VY+ + A P + +PIRPD+V+ VH++++KN RQP+ AGHQ SA+
Sbjct: 7 LTTVYNTDGKARDTTAVPSVIRY-SPIRPDVVHFVHMNLAKNERQPFGRYYLAGHQHSAE 65
Query: 257 HGVLDVLSPEFXXXXXXXXXXXXXXXXXTCVVGGRMFAPTKPWR 388
GG M++P K WR
Sbjct: 66 SWGTGRAVARVPRISGSGTSRNGQAAFANSARGGHMYSPLKVWR 109
>UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 370
Score = 56.0 bits (129), Expect = 6e-07
Identities = 22/33 (66%), Positives = 27/33 (81%)
Frame = +1
Query: 256 SWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG 354
SWGTGRA A +PRV G G++R+GQGA+ N CRG
Sbjct: 63 SWGTGRAKACVPRVNGSGSNRNGQGAYANFCRG 95
Score = 43.6 bits (98), Expect = 0.003
Identities = 21/63 (33%), Positives = 41/63 (65%)
Frame = +2
Query: 65 VARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 244
++R V+V +++ + + + LP VF PIR ++V +V+V+++KN++QP+ AG +
Sbjct: 1 MSRQTVNVLTQEGQ--KASTIELPKVFDTPIRAEVVKEVYVNLAKNAQQPHANDPMAGKK 58
Query: 245 TSA 253
SA
Sbjct: 59 VSA 61
>UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia
ATCC 50803
Length = 316
Score = 50.0 bits (114), Expect = 4e-05
Identities = 26/60 (43%), Positives = 33/60 (55%)
Frame = +2
Query: 74 PLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSA 253
P V V+ V A P P VF P+RPD++N VH + K R PY VS+ AG Q +A
Sbjct: 3 PTVKVFGPTGTQV--AELPRPKVFNVPLRPDIINFVHTQLRKCLRTPYAVSRYAGVQCTA 60
Score = 36.3 bits (80), Expect = 0.50
Identities = 19/39 (48%), Positives = 21/39 (53%)
Frame = +1
Query: 256 SWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGWTYVRP 372
SWG GRAVAR+PR G G GA+ N RG P
Sbjct: 62 SWGPGRAVARLPRKHG------GIGAYANFARGGHMAHP 94
>UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 248
Score = 42.7 bits (96), Expect = 0.006
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +2
Query: 164 DLVNDVHVSMSKNSRQPYCVSKEAGHQTSAD 256
D+VN VH ++ KN QPY VS+ AG+QTSA+
Sbjct: 25 DVVNFVHSNLHKNDSQPYAVSESAGYQTSAE 55
Score = 34.7 bits (76), Expect = 1.5
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +1
Query: 256 SWGTGRAVARIPRVRGGG 309
SWGTGRA +PRVRGGG
Sbjct: 56 SWGTGRARGPMPRVRGGG 73
>UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanopyrus kandleri
Length = 260
Score = 40.7 bits (91), Expect = 0.023
Identities = 21/61 (34%), Positives = 34/61 (55%)
Frame = +2
Query: 74 PLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSA 253
P+ ++ E+ +TV+ LP F+ P+R DL+ ++ N RQPY AG +TSA
Sbjct: 4 PVFNLEGEEVDTVE-----LPSFFEEPVRKDLIRRAVLAAQANRRQPYGTDPRAGFRTSA 58
Query: 254 D 256
+
Sbjct: 59 E 59
>UniRef50_UPI00015B613E Cluster: PREDICTED: similar to frazzled
protein; n=1; Nasonia vitripennis|Rep: PREDICTED: similar
to frazzled protein - Nasonia vitripennis
Length = 1478
Score = 36.3 bits (80), Expect = 0.50
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +2
Query: 365 FAPTKPWRALAPSRQTFRTKSGGGGKRLKKAPLRSVAVPGP 487
+AP + P+ T ++S GG KRL+ PL+S +VP P
Sbjct: 1345 YAPNSYGESGQPANSTTNSESNGGAKRLQGHPLKSFSVPAP 1385
>UniRef50_UPI0000DB7FD0 Cluster: PREDICTED: similar to roundabout
CG13521-PA, isoform A, partial; n=1; Apis mellifera|Rep:
PREDICTED: similar to roundabout CG13521-PA, isoform A,
partial - Apis mellifera
Length = 1389
Score = 36.3 bits (80), Expect = 0.50
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = -3
Query: 538 ASGIFSINVPSKPERNAGTRYSNAAQRRLF*PFSPPPGLCSEGLTRRCQRPPGLRGGEHT 359
AS +++ + ++ +R AG +Y + PP C + L + PP G +
Sbjct: 908 ASSVYNADDNTEAQRRAGHQYRMPLPNE-----NQPPNWC-DMLPPPPEHPPSFEGSLGS 961
Query: 358 S-THDTCYRRHPDRTYEYHHHGH 293
S TH + +H + Y+YHHH H
Sbjct: 962 SRTHSHTHHQHQHQ-YQYHHHHH 983
>UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3;
Archaea|Rep: 50S ribosomal protein L4P - Sulfolobus
solfataricus
Length = 267
Score = 36.3 bits (80), Expect = 0.50
Identities = 35/140 (25%), Positives = 56/140 (40%)
Frame = +2
Query: 131 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSADHGVLDVLSPEFXXXXXXX 310
LP +F P+R DL+ V ++ +S QP AG +TSA+ +++
Sbjct: 25 LPIIFSFPVRKDLIRRVFIAEFTHSLQPKGRDPNAGKRTSAESFGINL-----GMARVPR 79
Query: 311 XXXXXXXXXXTCVVGGRMFAPTKPWRALAPSRQTFRTKSGGGGKRLKKAPLRSVAVPGPS 490
VGGR+ P + LA K + A + +++
Sbjct: 80 VKNSGEAALAPNTVGGRLAFPPSVNKKLAEEANV---------KEKRLAVISALSATADI 130
Query: 491 VPFRLRGHIY*KDSRSFPLV 550
R RGH++ KDS FP+V
Sbjct: 131 AFVRARGHVF-KDSVRFPIV 149
>UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;
Ostreococcus tauri|Rep: Ribosomal protein
RPL1/RPL2/RL4L4 - Ostreococcus tauri
Length = 404
Score = 35.9 bits (79), Expect = 0.66
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +2
Query: 116 GAAKPLPFVFKAPIRPDLVNDVHVSMSKN 202
GA+ +P VF +PIR D+VN VH ++KN
Sbjct: 15 GASCAMPEVFLSPIRADIVNAVHTGLAKN 43
>UniRef50_UPI0000E47A9F Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 468
Score = 35.1 bits (77), Expect = 1.2
Identities = 28/86 (32%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = -3
Query: 436 PPPGLCSEGLTRRCQRPPGLRGGEHTSTHDTCYRRHPDRTYEYHHHG-HAEFGRQHVQYP 260
PPP L + T+ G TS H Y HP + HHH ++ GR H P
Sbjct: 362 PPPPLHTSTTTKH----NSWHSGVATSRHHQQY--HPPHHQQQHHHNKNSSQGRHHNNIP 415
Query: 259 MIS-TGLVTSLLAHAVGLPRVLGHRN 185
S G TS + G PR + H N
Sbjct: 416 FRSHQGRNTSYNSSNYGKPRFIPHMN 441
>UniRef50_UPI000058888F Cluster: PREDICTED: similar to
ENSANGP00000014064; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to ENSANGP00000014064
- Strongylocentrotus purpuratus
Length = 300
Score = 35.1 bits (77), Expect = 1.2
Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Frame = -3
Query: 430 PGLCSEGLTRRCQRPPGLRGGEHTST----HDTCYRRHPDRTYEYHHHGHAEFGRQH 272
P L S ++ + G+ + + H+ YR H + +HHHGH+ G H
Sbjct: 76 PSLFSVSTPKKVRESDGISSSQDPNDGLQDHERAYRPHSNSDGHHHHHGHSHHGHSH 132
>UniRef50_Q7S3X5 Cluster: Putative uncharacterized protein NCU02214.1;
n=1; Neurospora crassa|Rep: Putative uncharacterized
protein NCU02214.1 - Neurospora crassa
Length = 1018
Score = 34.7 bits (76), Expect = 1.5
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Frame = -3
Query: 433 PPGLCSEGLTRRCQR--PPGLRGGEHTSTHDTCYRRHPDRTYEYHHHGHA 290
P L +G T R Q+ PP H TH + H + +HHH HA
Sbjct: 870 PGSLRGDGSTHRHQQQPPPPKPSSYHIGTHHNSHNHHNYLLHHHHHHPHA 919
>UniRef50_UPI0000DD86E0 Cluster: PREDICTED: hypothetical protein;
n=1; Homo sapiens|Rep: PREDICTED: hypothetical protein -
Homo sapiens
Length = 359
Score = 34.3 bits (75), Expect = 2.0
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = -3
Query: 439 SPPPGLCSEGLTRRCQRPPGLRGGEHTSTHDTCYRRHPDR 320
SP PG C EG RRC+ P G S + R P R
Sbjct: 255 SPYPGFCGEGAVRRCRNPAGTGSRSLGSNAFSAGRNRPGR 294
>UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 259
Score = 33.9 bits (74), Expect = 2.7
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = +2
Query: 80 VSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAD 256
++VYS K + + LP +F+ RPD++ +SM QP+ AG +T+A+
Sbjct: 4 INVYSLKGDITEEIE--LPEIFEEEYRPDVIKRAVISMQTARIQPWGTDPMAGKRTTAE 60
>UniRef50_P33433 Cluster: Histidine-rich glycoprotein; n=4; Bos
taurus|Rep: Histidine-rich glycoprotein - Bos taurus
(Bovine)
Length = 396
Score = 33.9 bits (74), Expect = 2.7
Identities = 21/59 (35%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = -3
Query: 445 PFSPPPGLCSEGLTRRCQRPPGLRGGEHTSTHD-TCYRRHPDRTYEYHHHGHAEFGRQH 272
PF PPPGL RC PP G H HD + HP + + HH H H
Sbjct: 234 PF-PPPGL-------RCPHPPFGTKGNHRPPHDHSSDEHHPHGHHPHGHHPHGHHPHGH 284
>UniRef50_Q0J0G9 Cluster: Os09g0510000 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os09g0510000 protein -
Oryza sativa subsp. japonica (Rice)
Length = 121
Score = 33.5 bits (73), Expect = 3.5
Identities = 18/55 (32%), Positives = 24/55 (43%)
Frame = -3
Query: 445 PFSPPPGLCSEGLTRRCQRPPGLRGGEHTSTHDTCYRRHPDRTYEYHHHGHAEFG 281
P PPPG +G Q+PP H H + H + ++HHHGH G
Sbjct: 40 PNQPPPGY--QGYFSEGQQPPYYYPPPHDPHHHHGHHHHHE---DHHHHGHHHHG 89
>UniRef50_A7QMM2 Cluster: Chromosome chr19 scaffold_126, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr19 scaffold_126, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 2025
Score = 33.5 bits (73), Expect = 3.5
Identities = 29/93 (31%), Positives = 43/93 (46%)
Frame = +1
Query: 52 NESIGSPTFSVGVLREE*DGAGCSQAPPVRVQGAHPSGPGQ*CSRFYVQELEAALLREQG 231
+ES + T +V + G+ A P V+ A P G + + A+LR+ G
Sbjct: 1929 SESTSTSTSTVVDVGVSKQGSPTVPADPEEVKQALPVGSSSTTINLQERARQRAMLRQAG 1988
Query: 232 GWSPNQC*SWGTGRAVARIPRVRGGGTHRSGQG 330
SP+ G GRA+ R VR GG R+G+G
Sbjct: 1989 VLSPSV--GRGRGRAITRGRGVR-GGRGRAGRG 2018
>UniRef50_A5AYB9 Cluster: Putative uncharacterized protein; n=1; Vitis
vinifera|Rep: Putative uncharacterized protein - Vitis
vinifera (Grape)
Length = 1491
Score = 33.5 bits (73), Expect = 3.5
Identities = 29/93 (31%), Positives = 43/93 (46%)
Frame = +1
Query: 52 NESIGSPTFSVGVLREE*DGAGCSQAPPVRVQGAHPSGPGQ*CSRFYVQELEAALLREQG 231
+ES + T +V + G+ A P V+ A P G + + A+LR+ G
Sbjct: 1395 SESTSTSTSTVVDVGVSKQGSPTVPADPEEVKQALPVGSSSTTINLQERARQRAMLRQAG 1454
Query: 232 GWSPNQC*SWGTGRAVARIPRVRGGGTHRSGQG 330
SP+ G GRA+ R VR GG R+G+G
Sbjct: 1455 VLSPSV--GRGRGRAITRGRGVR-GGRGRAGRG 1484
>UniRef50_UPI00015B4B32 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 1628
Score = 33.1 bits (72), Expect = 4.7
Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -3
Query: 337 RRHPDRTYEYHHHGHAEFGRQHVQ-YP 260
R PD + +HHHGH G HV+ YP
Sbjct: 181 RGAPDTRHGHHHHGHHNHGHHHVEPYP 207
>UniRef50_A6NR78 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 448
Score = 33.1 bits (72), Expect = 4.7
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -3
Query: 364 HTSTHDTCYRRHPDRTYEYHHHGHAEFG 281
H HD C+ H + + +HHH HA G
Sbjct: 105 HCPGHDHCHEHHHEHEHGHHHHHHASPG 132
>UniRef50_Q5NB71 Cluster: Putative uncharacterized protein
P0431F01.18; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0431F01.18 - Oryza sativa subsp. japonica (Rice)
Length = 320
Score = 33.1 bits (72), Expect = 4.7
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = +1
Query: 280 ARIPRVRGGGTHRSGQGAFGNMCRG 354
AR PR GGG HR GA G + RG
Sbjct: 201 ARRPRAAGGGKHRGAHGANGGVARG 225
>UniRef50_UPI0001555B12 Cluster: PREDICTED: similar to myosin IB,
partial; n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
similar to myosin IB, partial - Ornithorhynchus anatinus
Length = 582
Score = 32.7 bits (71), Expect = 6.2
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +3
Query: 366 SPPRSPGGRWHRRVKPSEQSPGGG 437
SPPRSPGG W R + SP G
Sbjct: 117 SPPRSPGGLWSRTSRADTSSPSRG 140
>UniRef50_UPI0000F212F9 Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 194
Score = 32.7 bits (71), Expect = 6.2
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Frame = -3
Query: 364 HTSTHDTCYRRHPDRTYEY----HHHGHAEFGRQHVQYPMISTGLVTSL 230
HT HD + RH + + HHHGH GR H + ST +S+
Sbjct: 137 HTRHHDRHHGRHHHGRHHHGHRPHHHGHRHHGRHHHHHHHHSTTTQSSV 185
>UniRef50_A5UPY3 Cluster: HAD-superfamily hydrolase, subfamily IA,
variant 1; n=2; Roseiflexus|Rep: HAD-superfamily
hydrolase, subfamily IA, variant 1 - Roseiflexus sp.
RS-1
Length = 223
Score = 32.7 bits (71), Expect = 6.2
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -2
Query: 140 RTGGA-WLHPAPSHSSLSTPTLKVGLPIDSFRYFSEAIPP 24
R GG WLH A SH P +++GLP+ E +PP
Sbjct: 163 RIGGLRWLHAAQSHFHDVVPAVQMGLPVAWINRKHEPLPP 202
>UniRef50_A5NZ94 Cluster: Crotonyl-CoA reductase precursor; n=1;
Methylobacterium sp. 4-46|Rep: Crotonyl-CoA reductase
precursor - Methylobacterium sp. 4-46
Length = 394
Score = 32.7 bits (71), Expect = 6.2
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = -2
Query: 299 RTRGIRATARPVPHDQHWFGDQPPCXXXXXXXXSWT*KREHH*PGPD 159
R R IRA+A P D + G+ PP +W +RE H P D
Sbjct: 96 RPRLIRASASVAPKDLYEIGEIPPLGHVPSRMYAWAIRRERHGPPED 142
>UniRef50_A3RRP8 Cluster: Putative uncharacterized protein; n=1;
Ralstonia solanacearum UW551|Rep: Putative
uncharacterized protein - Ralstonia solanacearum UW551
Length = 117
Score = 32.7 bits (71), Expect = 6.2
Identities = 20/61 (32%), Positives = 28/61 (45%)
Frame = -3
Query: 502 PERNAGTRYSNAAQRRLF*PFSPPPGLCSEGLTRRCQRPPGLRGGEHTSTHDTCYRRHPD 323
P R+A TR+ R + F+ P + +T R P L+ G+ C RRHPD
Sbjct: 12 PYRHARTRH-RGIPRLTWVTFAQPTRAGTSNVTTAISRAP-LKSGDQRPAPAACARRHPD 69
Query: 322 R 320
R
Sbjct: 70 R 70
>UniRef50_A0GGU8 Cluster: Putative uncharacterized protein; n=1;
Burkholderia phytofirmans PsJN|Rep: Putative
uncharacterized protein - Burkholderia phytofirmans PsJN
Length = 753
Score = 32.7 bits (71), Expect = 6.2
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -3
Query: 400 RCQRPPGLRGGEHTSTHDTCYRRHPDRTYEYHHHGHAEFGRQ 275
R +R LRG H + +H R ++HHHGH GR+
Sbjct: 430 RRRRGRRLRGRHRRDHHHHDHHQHDRRLRDHHHHGHRLRGRR 471
>UniRef50_A7F232 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 2060
Score = 32.7 bits (71), Expect = 6.2
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +1
Query: 280 ARIPRVRGGGTHRSGQGAFGNMCRGWTYVRPHEALAGVG 396
+R+P++RGG +R G G G RG Y +P AG G
Sbjct: 1974 SRLPQMRGGNQNRGGGGVGGGGARGGIY-QPRGGAAGRG 2011
>UniRef50_Q1J406 Cluster: Hydrogenase accessory protein HypB; n=4;
Bacteria|Rep: Hydrogenase accessory protein HypB -
Sphingopyxis alaskensis (Sphingomonas alaskensis)
Length = 303
Score = 32.3 bits (70), Expect = 8.1
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = -3
Query: 367 EHTSTHDTCYRRHPDRTYEYHHHGHAEFGRQH 272
+H +HD + D ++ +HHH H + G H
Sbjct: 42 DHDHSHDHTHSHDHDHSHGHHHHHHHDHGHDH 73
>UniRef50_A5E904 Cluster: Putative uncharacterized protein; n=1;
Bradyrhizobium sp. BTAi1|Rep: Putative uncharacterized
protein - Bradyrhizobium sp. (strain BTAi1 / ATCC
BAA-1182)
Length = 235
Score = 32.3 bits (70), Expect = 8.1
Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 2/45 (4%)
Frame = -3
Query: 373 GGEHTSTHDTCYRRHPDRTYE--YHHHGHAEFGRQHVQYPMISTG 245
GG H Y HP Y +HHH +G + YP +TG
Sbjct: 142 GGPRPIFHGGGYHHHPHYAYRPYFHHHRRHFYGYRSYYYPTYTTG 186
>UniRef50_A0H6N2 Cluster: 200 kDa antigen p200, putative; n=3;
Comamonadaceae|Rep: 200 kDa antigen p200, putative -
Comamonas testosteroni KF-1
Length = 514
Score = 32.3 bits (70), Expect = 8.1
Identities = 28/93 (30%), Positives = 34/93 (36%), Gaps = 4/93 (4%)
Frame = -3
Query: 385 PGLRGGEHTSTHDTCYRRHPDRTYEYHHHGHAEFG-RQHVQYPMISTGLVTSLLAHAVGL 209
P G EH H R E+H HGHA+ G Q L SL +
Sbjct: 138 PCKHGAEHGDRHHQLQRLLGLEHVEHHGHGHAQAGDGNRAQRYTAFAELAQSL--GGIAA 195
Query: 208 PRVLGHR---NVNIIDQVRTDGRLEHEREGLGC 119
R H +V + R G+ HE EG GC
Sbjct: 196 AREAEHHARGDVELAVHGRQRGQQHHEVEGRGC 228
>UniRef50_Q16SY7 Cluster: Membrane associated guanylate kinase
inverted 1, magi1; n=2; Aedes aegypti|Rep: Membrane
associated guanylate kinase inverted 1, magi1 - Aedes
aegypti (Yellowfever mosquito)
Length = 1196
Score = 32.3 bits (70), Expect = 8.1
Identities = 19/56 (33%), Positives = 23/56 (41%)
Frame = -3
Query: 424 LCSEGLTRRCQRPPGLRGGEHTSTHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPM 257
L SE T PP GG +H + H +HHHGH +Q Q PM
Sbjct: 78 LGSEASTMMMMNPPPGGGGGPPHSHHHLHHMH------HHHHGHNHHQQQQQQVPM 127
>UniRef50_A0BK90 Cluster: Chromosome undetermined scaffold_111, whole
genome shotgun sequence; n=1; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_111, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 1552
Score = 32.3 bits (70), Expect = 8.1
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 52 NESIGSPTFSVGVLREE*DGAGCSQAPPVRVQGAHPSGPGQ 174
NES+G T S+ + + G + PP +++ +HP+ PGQ
Sbjct: 1425 NESLGEATMSLKPIIKRLSRDGKYEMPPTKIKLSHPNYPGQ 1465
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 627,087,512
Number of Sequences: 1657284
Number of extensions: 14840494
Number of successful extensions: 45300
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 41762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44858
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 38321472724
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -