Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30157
         (567 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    22   3.2  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     22   4.2  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   7.3  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   7.3  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   7.3  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   9.7  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   9.7  

>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = -1

Query: 447 NLFPPPPDFVRKV*RDGANARQGFVGANIRPP 352
           NL   PP  V K  +DG    +     ++RPP
Sbjct: 263 NLVSKPPHEVEKRAQDGQYEYRSLSHVSLRPP 294


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 119 HPAPSHSSLSTPTL 78
           HPA +HS+L +P +
Sbjct: 121 HPAAAHSALLSPAM 134


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 468 ALLYRVPAFLSGLEGTFIEKI 530
           +LL RVP  L  +   FI++I
Sbjct: 156 SLLARVPVMLMTISADFIQQI 176


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 468 ALLYRVPAFLSGLEGTFIEKI 530
           +LL RVP  L  +   FI++I
Sbjct: 156 SLLARVPVMLMTISADFIQQI 176


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 9/31 (29%), Positives = 13/31 (41%)
 Frame = +2

Query: 398  PSRQTFRTKSGGGGKRLKKAPLRSVAVPGPS 490
            P     ++   G     +  PL+  AVP PS
Sbjct: 1085 PDPVALKSAQQGSSSSSEGVPLKGTAVPPPS 1115


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +1

Query: 133 PVRVQGAHPSGPGQ*CSRFYVQELEAAL 216
           PVR+ G H  G    C++      E AL
Sbjct: 196 PVRIMGVHRPGFDNDCNKNTSTSKEIAL 223


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -3

Query: 331 HPDRTYEYHHHGH 293
           HP  T+ YH + H
Sbjct: 158 HPGMTFRYHFNVH 170


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,306
Number of Sequences: 336
Number of extensions: 3215
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13995094
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)