Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30155
(742 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P19404 Cluster: NADH dehydrogenase [ubiquinone] flavopr... 100 7e-20
UniRef50_Q6V9B3 Cluster: NADH:ubiquinone oxidoreductase 24 kD su... 89 8e-17
UniRef50_Q4QEG7 Cluster: NADH-ubiquinone oxidoreductase, mitocho... 88 2e-16
UniRef50_Q4UM09 Cluster: NADH-quinone oxidoreductase subunit E; ... 87 4e-16
UniRef50_O22769 Cluster: NADH-ubiquinone oxidoreductase 24 kDa s... 87 6e-16
UniRef50_Q2GDD2 Cluster: NADH dehydrogenase I, E subunit; n=1; N... 83 7e-15
UniRef50_A5CES4 Cluster: NADH dehydrogenase I chain E; n=1; Orie... 83 7e-15
UniRef50_Q9UUT9 Cluster: Subunit NUHM of protein NADH:Ubiquinone... 82 2e-14
UniRef50_Q54F10 Cluster: NADH dehydrogenase; n=1; Dictyostelium ... 80 5e-14
UniRef50_Q5ACX6 Cluster: Potential mitochondrial Complex I, NUHM... 80 6e-14
UniRef50_A5NY87 Cluster: NADH-quinone oxidoreductase, E subunit;... 79 9e-14
UniRef50_A0E600 Cluster: Chromosome undetermined scaffold_8, who... 78 2e-13
UniRef50_Q2TZN8 Cluster: NADH:ubiquinone oxidoreductase; n=11; P... 78 3e-13
UniRef50_Q1GTK2 Cluster: NADH-quinone oxidoreductase, E subunit;... 76 1e-12
UniRef50_A7DLV4 Cluster: NADH-quinone oxidoreductase, E subunit;... 75 1e-12
UniRef50_Q5DLW2 Cluster: Hydrogenosomal NADH dehydrogenase 24 kD... 75 2e-12
UniRef50_Q00RX3 Cluster: Putative NADH-ubiquinone oxidoreductase... 73 7e-12
UniRef50_Q5FGV2 Cluster: NADH-quinone oxidoreductase chain E; n=... 71 4e-11
UniRef50_Q9VVF0 Cluster: CG6485-PA; n=2; Sophophora|Rep: CG6485-... 69 9e-11
UniRef50_Q0BSK6 Cluster: NADH-quinone oxidoreductase chain E; n=... 69 2e-10
UniRef50_P56910 Cluster: NADH-quinone oxidoreductase subunit E 2... 60 6e-08
UniRef50_Q8G1B3 Cluster: NADH dehydrogenase I, E subunit; n=9; R... 57 4e-07
UniRef50_Q6MIR6 Cluster: NADH dehydrogenase I chain E; n=1; Bdel... 57 4e-07
UniRef50_Q83BQ9 Cluster: NADH dehydrogenase I, E subunit; n=3; C... 57 5e-07
UniRef50_Q98KQ9 Cluster: NADH-ubiquinone dehydrogenase chain E 1... 56 7e-07
UniRef50_A3UCV4 Cluster: ATP synthase subunit E; n=4; Alphaprote... 56 9e-07
UniRef50_A6H1R0 Cluster: NADH dehydrogenase I, E subunit; n=2; B... 55 2e-06
UniRef50_A4SXP9 Cluster: NADH-quinone oxidoreductase, E subunit;... 55 2e-06
UniRef50_A3U1M2 Cluster: ATP synthase subunit E; n=9; Alphaprote... 55 2e-06
UniRef50_Q0C8X0 Cluster: Putative uncharacterized protein; n=1; ... 55 2e-06
UniRef50_P56909 Cluster: NADH-quinone oxidoreductase subunit E 1... 55 2e-06
UniRef50_Q11VB6 Cluster: NADH dehydrogenase I chain E; n=2; Bact... 54 3e-06
UniRef50_Q82TU7 Cluster: Respiratory-chain NADH dehydrogenase 24... 53 9e-06
UniRef50_A2F771 Cluster: Respiratory-chain NADH dehydrogenase 24... 53 9e-06
UniRef50_Q3ZXM4 Cluster: Hydrogenase subunit HymA; n=13; cellula... 52 1e-05
UniRef50_P29914 Cluster: NADH-quinone oxidoreductase chain 2; n=... 52 1e-05
UniRef50_Q0PQQ4 Cluster: NADH dehydrogenase I E subunit; n=1; En... 51 3e-05
UniRef50_P0AFD3 Cluster: NADH-quinone oxidoreductase subunit E; ... 51 3e-05
UniRef50_Q9PGJ1 Cluster: NADH-ubiquinone oxidoreductase, NQO2 su... 50 5e-05
UniRef50_Q8ABI7 Cluster: NADH-ubiquinone oxidoreductase subunit;... 50 5e-05
UniRef50_A7HLQ9 Cluster: NADH-quinone oxidoreductase, E subunit;... 50 5e-05
UniRef50_Q5JIQ1 Cluster: NADH:ubiquinone oxidoreductase, subunit... 50 8e-05
UniRef50_A7CUG1 Cluster: NADH-quinone oxidoreductase, E subunit;... 49 1e-04
UniRef50_A5UZH6 Cluster: NADH-quinone oxidoreductase, E subunit;... 49 1e-04
UniRef50_Q746S5 Cluster: NADH dehydrogenase I, E subunit; n=4; D... 48 2e-04
UniRef50_Q67JG1 Cluster: Putative iron hydrogenase small subunit... 48 2e-04
UniRef50_Q2LQE7 Cluster: NADH-quinone oxidoreductase chain F; n=... 48 2e-04
UniRef50_Q8RBD2 Cluster: NADH:ubiquinone oxidoreductase 24 kD su... 47 4e-04
UniRef50_Q67P18 Cluster: NADH dehydrogenase I subunit E; n=1; Sy... 47 4e-04
UniRef50_A6FCN2 Cluster: NuoE2 NADH I CHAIN E; n=1; Moritella sp... 47 4e-04
UniRef50_A3ERJ3 Cluster: NADH ubiquinone oxidoreductase 24 kD su... 47 6e-04
UniRef50_Q2RHR8 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 46 7e-04
UniRef50_Q2LYE8 Cluster: NADH:ubiquinone oxidoreductase 24 kD su... 46 0.001
UniRef50_Q0AZ71 Cluster: NADH:ubiquinone oxidoreductase 24 kD su... 46 0.001
UniRef50_A1WXW3 Cluster: NADH-quinone oxidoreductase, E subunit;... 46 0.001
UniRef50_Q608Y0 Cluster: NADH dehydrogenase I, E subunit; n=5; B... 45 0.002
UniRef50_Q1PYY2 Cluster: Similar to nuoE subunit of the NADH:ubi... 44 0.004
UniRef50_Q0EZQ5 Cluster: NADH dehydrogenase I chain E; n=1; Mari... 44 0.004
UniRef50_A5D2H5 Cluster: NADH:ubiquinone oxidoreductase 24 kD su... 44 0.005
UniRef50_A4J528 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 43 0.009
UniRef50_Q6MDR2 Cluster: Putative NADH-ubiquinone oxidoreductase... 42 0.012
UniRef50_A0UVM6 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 42 0.012
UniRef50_Q7NZH7 Cluster: NADH-ubiquinone oxidoreductase, chain E... 42 0.016
UniRef50_Q02CT9 Cluster: NADH-quinone oxidoreductase, E subunit;... 42 0.016
UniRef50_Q6A6G2 Cluster: NADH dehydrogenase I chain E; n=1; Prop... 42 0.021
UniRef50_Q0PIE2 Cluster: NAD(P)H-quinone oxidoreductase 24 kDa s... 42 0.021
UniRef50_A7IL17 Cluster: NADH dehydrogenase (Ubiquinone) 24 kDa ... 42 0.021
UniRef50_Q9WXM7 Cluster: NADP-reducing hydrogenase, subunit A; n... 41 0.028
UniRef50_A6PRE1 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 41 0.028
UniRef50_A0LJN9 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 41 0.028
UniRef50_Q0AVX7 Cluster: Fe-hydrogenase, gamma subunit; n=4; Syn... 40 0.049
UniRef50_P65574 Cluster: NADH-quinone oxidoreductase subunit E; ... 40 0.049
UniRef50_O13691 Cluster: Probable NADH-ubiquinone oxidoreductase... 40 0.049
UniRef50_Q2JFL6 Cluster: NADH-quinone oxidoreductase, E subunit;... 40 0.064
UniRef50_Q1NQY7 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 40 0.064
UniRef50_Q0AWA4 Cluster: NADH:ubiquinone oxidoreductase 24 kD su... 40 0.064
UniRef50_Q092T1 Cluster: NADH-ubiquinone oxidoreductase 24 kDa s... 40 0.064
UniRef50_A4M6K3 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 40 0.064
UniRef50_A1AVR6 Cluster: NADH-quinone oxidoreductase, E subunit;... 40 0.064
UniRef50_Q89AU3 Cluster: NADH-quinone oxidoreductase subunit E; ... 40 0.064
UniRef50_O27591 Cluster: NADP-reducing hydrogenase, subunit A; n... 40 0.085
UniRef50_Q9S5X7 Cluster: Fe-hydrogenase, subunit gamma; n=5; The... 39 0.11
UniRef50_Q057X2 Cluster: NADH dehydrogenase I chain E; n=1; Buch... 39 0.11
UniRef50_A3THI9 Cluster: ATP synthase subunit E; n=3; Actinomyce... 39 0.11
UniRef50_A1ALP3 Cluster: NADH-quinone oxidoreductase, E subunit;... 39 0.11
UniRef50_A5UZ48 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 39 0.15
UniRef50_Q835I9 Cluster: NAD-dependent formate dehydrogenase, ga... 38 0.20
UniRef50_A7HII1 Cluster: NADH-quinone oxidoreductase, E subunit;... 38 0.20
UniRef50_A0LLS9 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 38 0.20
UniRef50_Q2LS97 Cluster: NADH-quinone oxidoreductase chain F; n=... 38 0.26
UniRef50_A5FS13 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 38 0.26
UniRef50_Q6FE68 Cluster: NADH dehydrogenase I chain E; n=5; Mora... 38 0.34
UniRef50_Q4AHT8 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 38 0.34
UniRef50_A0J5R7 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 38 0.34
UniRef50_Q01WJ0 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 37 0.45
UniRef50_A5FSK9 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 37 0.45
UniRef50_O66842 Cluster: NADH-quinone oxidoreductase subunit E; ... 37 0.45
UniRef50_Q89QJ0 Cluster: NADH dehydrogenase I chain E; n=16; Alp... 37 0.60
UniRef50_Q6N1Z1 Cluster: NADH-ubiquinone dehydrogenase chain E; ... 37 0.60
UniRef50_Q3A640 Cluster: NADH:ubiquinone oxidoreductase 24 kD su... 37 0.60
UniRef50_Q1IS36 Cluster: NADH-quinone oxidoreductase, E subunit;... 37 0.60
UniRef50_Q9ZBV8 Cluster: Putative respiratory chain oxidoreducta... 36 0.79
UniRef50_Q2FP98 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 36 0.79
UniRef50_Q9RU91 Cluster: NADH dehydrogenase I, E subunit; n=2; D... 36 1.0
UniRef50_Q2AG84 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 36 1.0
UniRef50_A6PPY8 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 36 1.0
UniRef50_A3YBB2 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 36 1.0
UniRef50_A1AP34 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 36 1.0
UniRef50_Q1PW48 Cluster: Similar to NADH:ubiquinone oxidoreducta... 36 1.4
UniRef50_A4J9N9 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 36 1.4
UniRef50_Q98BW7 Cluster: NAD-dependent formate dehydrogenase gam... 35 1.8
UniRef50_Q74GA4 Cluster: NADH dehydrogenase I, E subunit; n=6; G... 35 1.8
UniRef50_Q47HE6 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 35 1.8
UniRef50_Q2C5T5 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 35 1.8
UniRef50_Q8YYU5 Cluster: NADH dehydrogenase I chain E; n=4; Bact... 35 2.4
UniRef50_Q1PWG7 Cluster: Similar to to proton-translocating NADH... 34 3.2
UniRef50_A6F4P8 Cluster: Putative uncharacterized protein; n=1; ... 34 3.2
UniRef50_Q4AMU5 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 34 4.2
UniRef50_Q0LHA0 Cluster: Peptidase S9, prolyl oligopeptidase act... 34 4.2
UniRef50_A1HP41 Cluster: NADH-quinone oxidoreductase, E subunit;... 34 4.2
UniRef50_A0QNT7 Cluster: Formate dehydrogenase, gamma subunit; n... 34 4.2
UniRef50_Q3A461 Cluster: NADP-reducing hydrogenase chain A; n=5;... 33 5.6
UniRef50_A3DCI7 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 33 5.6
UniRef50_A7PC77 Cluster: Chromosome chr2 scaffold_11, whole geno... 33 5.6
UniRef50_Q2Z141 Cluster: Putative ATP-dependent DNA helicase; n=... 33 5.6
UniRef50_Q54GJ1 Cluster: Putative uncharacterized protein; n=1; ... 33 7.4
UniRef50_UPI00003C0AF2 Cluster: PREDICTED: similar to Bone morph... 33 9.7
UniRef50_Q6SGN4 Cluster: NADH-quinone oxidoreductase, E subunit;... 33 9.7
UniRef50_A0LGJ1 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 33 9.7
UniRef50_A7S5S7 Cluster: Predicted protein; n=2; Nematostella ve... 33 9.7
>UniRef50_P19404 Cluster: NADH dehydrogenase [ubiquinone]
flavoprotein 2, mitochondrial precursor; n=64; cellular
organisms|Rep: NADH dehydrogenase [ubiquinone]
flavoprotein 2, mitochondrial precursor - Homo sapiens
(Human)
Length = 249
Score = 99.5 bits (237), Expect = 7e-20
Identities = 58/134 (43%), Positives = 78/134 (58%)
Frame = +1
Query: 190 KESRGFVGHLP*RSQARCHDSLLDLAQRQSGGWIPISAMHKVAEILNLPKMRVYEVATFY 369
K V + P +A +LDLAQRQ+G W+PISAM+KVAE+L +P MRVYEVATFY
Sbjct: 61 KRIEAIVKNYPEGHKAAAVLPVLDLAQRQNG-WLPISAMNKVAEVLQVPPMRVYEVATFY 119
Query: 370 TMFIRRPIGKYHVQVLGLNPRGKXPYPCGFEALMPY*MQLNREPNCEVGGNSPCGKFSVS 549
TM+ R+P+GKYH+QV PC + ++ +VG +P F++
Sbjct: 120 TMYNRKPVGKYHIQVCTTT-------PCMLRNSDSILEAIQKKLGIKVGETTPDKLFTLI 172
Query: 550 EX*NVLGACVNPPI 591
E LGACVN P+
Sbjct: 173 EV-ECLGACVNAPM 185
Score = 66.9 bits (156), Expect = 5e-10
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Frame = +2
Query: 35 LSSLRTGVQGLWRMSSKSIQTTASRQH--DSLFVHRDTPEDNPSIPFEFSQAXQKRVEAL 208
L + G+ W +++ T + +LFVHRDTPE+NP PF+F+ KR+EA+
Sbjct: 7 LRARAAGLTAHWGRHVRNLHKTVMQNGAGGALFVHRDTPENNPDTPFDFTPENYKRIEAI 66
Query: 209 LAIYPEGHKRGAMIP 253
+ YPEGHK A++P
Sbjct: 67 VKNYPEGHKAAAVLP 81
>UniRef50_Q6V9B3 Cluster: NADH:ubiquinone oxidoreductase 24 kD
subunit; n=2; cellular organisms|Rep: NADH:ubiquinone
oxidoreductase 24 kD subunit - Chlamydomonas reinhardtii
Length = 282
Score = 89.4 bits (212), Expect = 8e-17
Identities = 44/113 (38%), Positives = 69/113 (61%)
Frame = +1
Query: 253 LLDLAQRQSGGWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVLGLNPR 432
+LD+ Q+++GGW+ ++AM++VA++L++ +RVYEVATFYTMF R IGKYHVQ+ G
Sbjct: 92 VLDVTQQENGGWLSLAAMNRVAKLLDMAPIRVYEVATFYTMFNRTKIGKYHVQICGTT-- 149
Query: 433 GKXPYPCGFEALMPY*MQLNREPNCEVGGNSPCGKFSVSEX*NVLGACVNPPI 591
PC + + + +G + G F++ E +GACVN P+
Sbjct: 150 -----PCRLQGSQKIEEAITKHLGIGIGQTTQDGLFTLGEM-ECMGACVNAPM 196
Score = 50.4 bits (115), Expect = 5e-05
Identities = 22/51 (43%), Positives = 33/51 (64%)
Frame = +2
Query: 101 ASRQHDSLFVHRDTPEDNPSIPFEFSQAXQKRVEALLAIYPEGHKRGAMIP 253
A+ D +H+DTPE+N + FEFS+A K V ++A YP +K+ A+IP
Sbjct: 41 ATNSTDIFNIHKDTPENNAATSFEFSEATLKVVNDIIARYPPNYKQSAIIP 91
>UniRef50_Q4QEG7 Cluster: NADH-ubiquinone oxidoreductase,
mitochondrial, putative; n=6; Trypanosomatidae|Rep:
NADH-ubiquinone oxidoreductase, mitochondrial, putative
- Leishmania major
Length = 273
Score = 88.2 bits (209), Expect = 2e-16
Identities = 48/113 (42%), Positives = 66/113 (58%)
Frame = +1
Query: 253 LLDLAQRQSGGWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVLGLNPR 432
LL LAQ+Q GG+IP++AM+K+A+I +P M V+E TFY+MF R P+GKYH+Q P
Sbjct: 82 LLHLAQQQQGGYIPVTAMYKIAKICEVPPMHVFETVTFYSMFNRHPVGKYHIQFCRTTP- 140
Query: 433 GKXPYPCGFEALMPY*MQLNREPNCEVGGNSPCGKFSVSEX*NVLGACVNPPI 591
CG + LM M N + G + G ++ E LGACVN P+
Sbjct: 141 ---CMLCGADELMERTMHY---LNVRMHGTTSDGLITIGEM-ECLGACVNAPM 186
>UniRef50_Q4UM09 Cluster: NADH-quinone oxidoreductase subunit E;
n=18; Alphaproteobacteria|Rep: NADH-quinone
oxidoreductase subunit E - Rickettsia felis (Rickettsia
azadi)
Length = 167
Score = 87.0 bits (206), Expect = 4e-16
Identities = 48/113 (42%), Positives = 69/113 (61%)
Frame = +1
Query: 253 LLDLAQRQSGGWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVLGLNPR 432
LLDLAQRQ+GGW+P+ A+ VA +L +P MR YEVATFY+MF + +GKYH+QV P
Sbjct: 34 LLDLAQRQNGGWLPVPAIEYVANMLEMPYMRAYEVATFYSMFNLKRVGKYHIQVCTTTPC 93
Query: 433 GKXPYPCGFEALMPY*MQLNREPNCEVGGNSPCGKFSVSEX*NVLGACVNPPI 591
+ G + +M ++ ++ + KF++SE LGACVN P+
Sbjct: 94 ----WLHGSDDIMKI---CEKKLGIKLKETTEDQKFTLSEI-ECLGACVNAPV 138
>UniRef50_O22769 Cluster: NADH-ubiquinone oxidoreductase 24 kDa
subunit, mitochondrial precursor; n=8;
Viridiplantae|Rep: NADH-ubiquinone oxidoreductase 24 kDa
subunit, mitochondrial precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 255
Score = 86.6 bits (205), Expect = 6e-16
Identities = 48/113 (42%), Positives = 65/113 (57%)
Frame = +1
Query: 253 LLDLAQRQSGGWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVLGLNPR 432
LLDLAQ+Q+GGW+P+SAM+ VA+++ + +RVYEVATFY+MF R +GKYH+ V G
Sbjct: 76 LLDLAQQQNGGWLPVSAMNAVAKVIEVAPIRVYEVATFYSMFNRAKVGKYHLLVCGTT-- 133
Query: 433 GKXPYPCGFEALMPY*MQLNREPNCEVGGNSPCGKFSVSEX*NVLGACVNPPI 591
PC L + G + G FSV E +G CVN P+
Sbjct: 134 -----PCMIRGSRDIESALLDHLGVKRGEVTKDGLFSVGEM-ECMGCCVNAPM 180
Score = 50.8 bits (116), Expect = 3e-05
Identities = 19/45 (42%), Positives = 33/45 (73%)
Frame = +2
Query: 119 SLFVHRDTPEDNPSIPFEFSQAXQKRVEALLAIYPEGHKRGAMIP 253
+L H D+P++ P +P+EFS+A Q +V+ +L+ YP +K+ A+IP
Sbjct: 31 ALNYHLDSPDNKPDLPWEFSEANQSKVKEILSYYPSNYKQSAVIP 75
>UniRef50_Q2GDD2 Cluster: NADH dehydrogenase I, E subunit; n=1;
Neorickettsia sennetsu str. Miyayama|Rep: NADH
dehydrogenase I, E subunit - Neorickettsia sennetsu
(strain Miyayama)
Length = 181
Score = 83.0 bits (196), Expect = 7e-15
Identities = 48/113 (42%), Positives = 64/113 (56%)
Frame = +1
Query: 253 LLDLAQRQSGGWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVLGLNPR 432
LL L QRQ WIPI+AM VA++L LP ++VYEVA+FY+MF P+GK+ ++V P
Sbjct: 53 LLHLVQRQHENWIPIAAMDHVAQLLGLPVIKVYEVASFYSMFNTAPVGKHTIRVCRTTPC 112
Query: 433 GKXPYPCGFEALMPY*MQLNREPNCEVGGNSPCGKFSVSEX*NVLGACVNPPI 591
C EA RE +VG + KFS+ E LGACV+ P+
Sbjct: 113 WLRGSDCLIEA-------AKRELGIKVGHKTEDNKFSLDEV-ECLGACVSAPV 157
>UniRef50_A5CES4 Cluster: NADH dehydrogenase I chain E; n=1;
Orientia tsutsugamushi Boryong|Rep: NADH dehydrogenase I
chain E - Orientia tsutsugamushi (strain Boryong)
(Rickettsia tsutsugamushi)
Length = 192
Score = 83.0 bits (196), Expect = 7e-15
Identities = 47/132 (35%), Positives = 75/132 (56%)
Frame = +1
Query: 196 SRGFVGHLP*RSQARCHDSLLDLAQRQSGGWIPISAMHKVAEILNLPKMRVYEVATFYTM 375
++ + + P +A ++LDLAQ Q+ W+ S + VA +L +P ++VYE+A+FYTM
Sbjct: 19 AKKIINNYPAGKEASAVLAILDLAQNQNNNWLSNSCIEYVANLLKMPYIKVYEIASFYTM 78
Query: 376 FIRRPIGKYHVQVLGLNPRGKXPYPCGFEALMPY*MQLNREPNCEVGGNSPCGKFSVSEX 555
F +P+GKYH+Q+ G P + G + +M + +L + E G S F+VSE
Sbjct: 79 FNLQPVGKYHIQICGTTP----CWLRGSDDIMNFCKKLLK---IETGKTSQDKLFTVSET 131
Query: 556 *NVLGACVNPPI 591
LGAC N P+
Sbjct: 132 -ECLGACRNAPV 142
>UniRef50_Q9UUT9 Cluster: Subunit NUHM of protein NADH:Ubiquinone
Oxidoreductase; n=3; Fungi/Metazoa group|Rep: Subunit
NUHM of protein NADH:Ubiquinone Oxidoreductase -
Yarrowia lipolytica (Candida lipolytica)
Length = 243
Score = 81.8 bits (193), Expect = 2e-14
Identities = 48/113 (42%), Positives = 67/113 (59%)
Frame = +1
Query: 253 LLDLAQRQSGGWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVLGLNPR 432
LLD+ QRQ G + IS M+ VA++L +P MRVYEVATFYTM+ R P+G+YH+Q+ P
Sbjct: 74 LLDIGQRQLG-YTSISVMNYVAKLLEMPPMRVYEVATFYTMYNRTPMGRYHLQICTTTP- 131
Query: 433 GKXPYPCGFEALMPY*MQLNREPNCEVGGNSPCGKFSVSEX*NVLGACVNPPI 591
CG + +M + N + G + F++SE LGACVN P+
Sbjct: 132 ---CQLCGSDGIME---AVQNTLNIKPGETTKDNLFTLSEV-ECLGACVNAPM 177
Score = 59.3 bits (137), Expect = 1e-07
Identities = 30/74 (40%), Positives = 46/74 (62%)
Frame = +2
Query: 32 MLSSLRTGVQGLWRMSSKSIQTTASRQHDSLFVHRDTPEDNPSIPFEFSQAXQKRVEALL 211
ML +R + L R ++++ Q +R H + VHR+T +NPSIPFEFS KR E ++
Sbjct: 1 MLRLIRPRLAALARPTTRAPQALNARTH-IVSVHRNTENNNPSIPFEFSPENMKRAEEVI 59
Query: 212 AIYPEGHKRGAMIP 253
A YP +K+ A++P
Sbjct: 60 AKYPPQYKKAAVMP 73
>UniRef50_Q54F10 Cluster: NADH dehydrogenase; n=1; Dictyostelium
discoideum AX4|Rep: NADH dehydrogenase - Dictyostelium
discoideum AX4
Length = 247
Score = 80.2 bits (189), Expect = 5e-14
Identities = 49/113 (43%), Positives = 59/113 (52%)
Frame = +1
Query: 253 LLDLAQRQSGGWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVLGLNPR 432
LLDLAQRQ+GGWI + AM KVA I + M YEVA+FYTMF R IG+ VQV
Sbjct: 81 LLDLAQRQNGGWISLRAMDKVAHICGIAPMTAYEVASFYTMFNRTKIGENFVQVCTTT-- 138
Query: 433 GKXPYPCGFEALMPY*MQLNREPNCEVGGNSPCGKFSVSEX*NVLGACVNPPI 591
PC +VG +P KF++ E LGACVN P+
Sbjct: 139 -----PCMLRGSGEIIKTCKSHLGIQVGETTPDNKFTLVEV-ECLGACVNAPM 185
Score = 44.8 bits (101), Expect = 0.002
Identities = 21/54 (38%), Positives = 36/54 (66%)
Frame = +2
Query: 92 QTTASRQHDSLFVHRDTPEDNPSIPFEFSQAXQKRVEALLAIYPEGHKRGAMIP 253
Q+T +R D+L H +T ++N PF+F+Q +VE +LA YP+ +++ A+IP
Sbjct: 28 QSTLTRS-DALSRHVETEDNNEHTPFDFTQENLVKVEKILAKYPKQYRQSALIP 80
>UniRef50_Q5ACX6 Cluster: Potential mitochondrial Complex I,
NUHM_24kd subunit; n=5; Saccharomycetales|Rep: Potential
mitochondrial Complex I, NUHM_24kd subunit - Candida
albicans (Yeast)
Length = 243
Score = 79.8 bits (188), Expect = 6e-14
Identities = 49/113 (43%), Positives = 68/113 (60%)
Frame = +1
Query: 253 LLDLAQRQSGGWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVLGLNPR 432
LLDL QRQ G + IS M+ VA++L++P MRVYEVATFYTM+ R P+GKY++QV P
Sbjct: 73 LLDLGQRQLG-FTSISVMNYVAKLLDMPPMRVYEVATFYTMYNRHPMGKYNLQVCTTTP- 130
Query: 433 GKXPYPCGFEALMPY*MQLNREPNCEVGGNSPCGKFSVSEX*NVLGACVNPPI 591
CG +++M + + G +P F++ E LGACVN P+
Sbjct: 131 ---CQLCGSDSIM---KAITDYLKIKPGQTTPDKLFTLQEV-ECLGACVNAPM 176
Score = 59.7 bits (138), Expect = 7e-08
Identities = 26/54 (48%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Frame = +2
Query: 95 TTASRQHDSLF-VHRDTPEDNPSIPFEFSQAXQKRVEALLAIYPEGHKRGAMIP 253
+T S+++ S+ VHRDT EDNP+I FEF+ +KR E ++A YP +K+GA +P
Sbjct: 19 STVSKRYSSIISVHRDTKEDNPNIAFEFNSENKKRAEEIIAKYPPQYKKGACMP 72
>UniRef50_A5NY87 Cluster: NADH-quinone oxidoreductase, E subunit;
n=1; Methylobacterium sp. 4-46|Rep: NADH-quinone
oxidoreductase, E subunit - Methylobacterium sp. 4-46
Length = 394
Score = 79.4 bits (187), Expect = 9e-14
Identities = 53/128 (41%), Positives = 66/128 (51%)
Frame = +1
Query: 208 VGHLP*RSQARCHDSLLDLAQRQSGGWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRR 387
+ P QA LL AQ Q+GGW+P A+ VA+ L +P +RV EVATFYTMF
Sbjct: 30 IAKYPEGRQASAVIPLLWRAQEQNGGWLPQKAIEAVADELGMPHIRVLEVATFYTMFALE 89
Query: 388 PIGKYHVQVLGLNPRGKXPYPCGFEALMPY*MQLNREPNCEVGGNSPCGKFSVSEX*NVL 567
P+G+Y +QV G P CG + L Y + P G SP G FS E L
Sbjct: 90 PVGRYWIQVCGTVPCD----VCGAKELKHY-LHDRLGP---AGHVSPDGNFSWLEV-ECL 140
Query: 568 GACVNPPI 591
GAC N P+
Sbjct: 141 GACCNAPM 148
>UniRef50_A0E600 Cluster: Chromosome undetermined scaffold_8, whole
genome shotgun sequence; n=5; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_8, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 263
Score = 78.2 bits (184), Expect = 2e-13
Identities = 43/113 (38%), Positives = 69/113 (61%)
Frame = +1
Query: 253 LLDLAQRQSGGWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVLGLNPR 432
LL LAQ+Q+ ++ +SAM K+A+IL +P+M VYE A+FY+MF R +GK+H+QV G P
Sbjct: 65 LLMLAQKQNNNFLSLSAMKKIAKILEIPEMDVYETASFYSMFNRERVGKFHLQVCGTTP- 123
Query: 433 GKXPYPCGFEALMPY*MQLNREPNCEVGGNSPCGKFSVSEX*NVLGACVNPPI 591
CG + ++ + ++ N + G + G +++ E LGAC N P+
Sbjct: 124 ---CQLCGSKDII---KTIEQKLNIKNGETTADGLYTLQEV-ECLGACANAPM 169
Score = 44.0 bits (99), Expect = 0.004
Identities = 18/55 (32%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Frame = +2
Query: 92 QTTASRQHDSLFV-HRDTPEDNPSIPFEFSQAXQKRVEALLAIYPEGHKRGAMIP 253
Q + ++ ++FV HR+ +++ S+PF+F+ K++EA+LA +P K+ IP
Sbjct: 10 QRKSIQRFSNIFVAHRNRDDNSDSVPFDFTDENYKKIEAILAKFPSNEKKSGTIP 64
>UniRef50_Q2TZN8 Cluster: NADH:ubiquinone oxidoreductase; n=11;
Pezizomycotina|Rep: NADH:ubiquinone oxidoreductase -
Aspergillus oryzae
Length = 270
Score = 77.8 bits (183), Expect = 3e-13
Identities = 48/113 (42%), Positives = 63/113 (55%)
Frame = +1
Query: 253 LLDLAQRQSGGWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVLGLNPR 432
LLDL QRQ G + IS M++VA +L +P MRVYEVATFYTM+ R P+GKY VQ+ P
Sbjct: 83 LLDLGQRQHG-FTSISVMNEVARLLEMPPMRVYEVATFYTMYNREPVGKYFVQLCTTTPC 141
Query: 433 GKXPYPCGFEALMPY*MQLNREPNCEVGGNSPCGKFSVSEX*NVLGACVNPPI 591
CG ++ + G + G F++ E LGACVN P+
Sbjct: 142 QLG--GCGSTKILE---AIQEHLGITPGHTTEDGLFTLLEV-ECLGACVNAPM 188
Score = 52.8 bits (121), Expect = 9e-06
Identities = 22/49 (44%), Positives = 34/49 (69%)
Frame = +2
Query: 107 RQHDSLFVHRDTPEDNPSIPFEFSQAXQKRVEALLAIYPEGHKRGAMIP 253
R DSL VHR+ P +NPSIPF F++ Q+ ++ +L YP +K+ A++P
Sbjct: 34 RCSDSLSVHRNKPTNNPSIPFTFNEQNQRLIDEILKRYPPQYKKAAVMP 82
>UniRef50_Q1GTK2 Cluster: NADH-quinone oxidoreductase, E subunit;
n=8; Alphaproteobacteria|Rep: NADH-quinone
oxidoreductase, E subunit - Sphingopyxis alaskensis
(Sphingomonas alaskensis)
Length = 222
Score = 75.8 bits (178), Expect = 1e-12
Identities = 52/147 (35%), Positives = 73/147 (49%), Gaps = 9/147 (6%)
Frame = +1
Query: 178 AGXSKESRGFVGHLP*RSQARCHDSLLDLAQRQSG------GWIPISAMHKVAEILNLPK 339
A +++++ + P Q LLDLAQRQ G GW+P+ + VA L++P
Sbjct: 24 AENAEKAKAVIARYPAGRQRSAVMPLLDLAQRQVGAETQTQGWLPVPVIEYVAAQLDMPF 83
Query: 340 MRVYEVATFYTMFIRRPIGKYHVQVLGLNP---RGKXPYPCGFEALMPY*MQLNREPNCE 510
+R YEVATFYTM+ P+G+YHVQV G P RG + NR
Sbjct: 84 IRAYEVATFYTMYNLAPVGRYHVQVCGTTPCLLRGSDDVTAACK---------NR--GMV 132
Query: 511 VGGNSPCGKFSVSEX*NVLGACVNPPI 591
G +P G F++SE +G C N P+
Sbjct: 133 KGKTTPDGLFTLSEV-ECMGTCANAPM 158
>UniRef50_A7DLV4 Cluster: NADH-quinone oxidoreductase, E subunit;
n=1; Methylobacterium extorquens PA1|Rep: NADH-quinone
oxidoreductase, E subunit - Methylobacterium extorquens
PA1
Length = 412
Score = 75.4 bits (177), Expect = 1e-12
Identities = 51/132 (38%), Positives = 69/132 (52%)
Frame = +1
Query: 196 SRGFVGHLP*RSQARCHDSLLDLAQRQSGGWIPISAMHKVAEILNLPKMRVYEVATFYTM 375
+RG + P QA LL AQ Q+GGW+P A+ VA+ L +P +RV EVATFYTM
Sbjct: 26 ARGQIAKYPEGRQASAVIPLLWKAQEQNGGWLPQKAIEAVADELGMPHIRVLEVATFYTM 85
Query: 376 FIRRPIGKYHVQVLGLNPRGKXPYPCGFEALMPY*MQLNREPNCEVGGNSPCGKFSVSEX 555
F P+G++ +QV G P CG + L + P+ +V + G FS E
Sbjct: 86 FALEPVGRFWIQVCGTVPCD----CCGAKELKAS-LHERLGPSGKVTAD---GNFSWLEV 137
Query: 556 *NVLGACVNPPI 591
LGAC N P+
Sbjct: 138 -ECLGACCNAPM 148
>UniRef50_Q5DLW2 Cluster: Hydrogenosomal NADH dehydrogenase 24 kDa
subunit; n=1; Nyctotherus ovalis|Rep: Hydrogenosomal
NADH dehydrogenase 24 kDa subunit - Nyctotherus ovalis
Length = 259
Score = 74.5 bits (175), Expect = 2e-12
Identities = 42/113 (37%), Positives = 63/113 (55%)
Frame = +1
Query: 253 LLDLAQRQSGGWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVLGLNPR 432
LL LAQ+Q+G ++ ++AM+KVA+IL + + VYEVA FY+MF R +GK +Q+ G P
Sbjct: 70 LLHLAQKQNGNFLTLAAMNKVAKILEMTNLNVYEVAAFYSMFNREKVGKIRLQICGTTP- 128
Query: 433 GKXPYPCGFEALMPY*MQLNREPNCEVGGNSPCGKFSVSEX*NVLGACVNPPI 591
CG +M ++GG + G F++ E LG C N P+
Sbjct: 129 ---CLLCGARDIM---KACEDHLGIKMGGTTKDGMFTLEEV-ECLGVCANAPM 174
Score = 39.5 bits (88), Expect = 0.085
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = +2
Query: 122 LFVHRDTPEDNPSIPFEFSQAXQKRVEALLAIYPEGHKRGAMI 250
L H +TPE+N FEF+ K + +LL YP+ +K+ A++
Sbjct: 26 LVTHHETPENNDDTYFEFTPENYKIINSLLKRYPDNYKKSAVL 68
>UniRef50_Q00RX3 Cluster: Putative NADH-ubiquinone oxidoreductase;
n=1; Ostreococcus tauri|Rep: Putative NADH-ubiquinone
oxidoreductase - Ostreococcus tauri
Length = 265
Score = 72.9 bits (171), Expect = 7e-12
Identities = 41/113 (36%), Positives = 61/113 (53%)
Frame = +1
Query: 253 LLDLAQRQSGGWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVLGLNPR 432
LLDLAQ+Q+ G + ++ M+ +A++L + +RVYEVATFY+MF R+ +GK HV V G
Sbjct: 68 LLDLAQQQNKGHLTLAMMNHIADVLEVAPIRVYEVATFYSMFNRQKMGKLHVMVCGTT-- 125
Query: 433 GKXPYPCGFEALMPY*MQLNREPNCEVGGNSPCGKFSVSEX*NVLGACVNPPI 591
PC L + + CG F++ E +G CVN P+
Sbjct: 126 -----PCMLRGSREIEKALEEWMGVKKFETTACGTFTLGEM-ECMGCCVNAPM 172
Score = 49.2 bits (112), Expect = 1e-04
Identities = 20/42 (47%), Positives = 29/42 (69%)
Frame = +2
Query: 128 VHRDTPEDNPSIPFEFSQAXQKRVEALLAIYPEGHKRGAMIP 253
VHRD PEDN ++ + F + + +V+A+L YP +KR AMIP
Sbjct: 26 VHRDVPEDNSTMTWTFEASVRPKVDAILRRYPSNYKRSAMIP 67
>UniRef50_Q5FGV2 Cluster: NADH-quinone oxidoreductase chain E; n=5;
canis group|Rep: NADH-quinone oxidoreductase chain E -
Ehrlichia ruminantium (strain Gardel)
Length = 183
Score = 70.5 bits (165), Expect = 4e-11
Identities = 43/113 (38%), Positives = 63/113 (55%)
Frame = +1
Query: 253 LLDLAQRQSGGWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVLGLNPR 432
LL +AQ+Q GG IPI+AM+ +A+ L++ + VYEVA FY+M+ GKY VQV P
Sbjct: 47 LLHIAQKQCGGLIPIAAMNYIADFLDMKPIHVYEVAKFYSMYNLSVTGKYLVQVCRTTP- 105
Query: 433 GKXPYPCGFEALMPY*MQLNREPNCEVGGNSPCGKFSVSEX*NVLGACVNPPI 591
+ CG + ++ N +VG + F++ E LGACVN P+
Sbjct: 106 ---CWLCGSDNVL---KACKEFLNIDVGNTTDDNLFTLKEV-ECLGACVNAPV 151
>UniRef50_Q9VVF0 Cluster: CG6485-PA; n=2; Sophophora|Rep: CG6485-PA
- Drosophila melanogaster (Fruit fly)
Length = 238
Score = 69.3 bits (162), Expect = 9e-11
Identities = 45/113 (39%), Positives = 59/113 (52%)
Frame = +1
Query: 253 LLDLAQRQSGGWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVLGLNPR 432
LLD+AQRQ G W+ ISA+ VAE + + M +E A FYTMF +P GKY V V P
Sbjct: 63 LLDIAQRQQG-WLSISAVQAVAETIKIDPMEAFEAAQFYTMFFMKPRGKYVVSVCTSTPC 121
Query: 433 GKXPYPCGFEALMPY*MQLNREPNCEVGGNSPCGKFSVSEX*NVLGACVNPPI 591
FEA + N E G +P +F++ E +GACVN P+
Sbjct: 122 KLRGGDEIFEA-------CKKTLNLEHGQTTPDMQFTLKED-YCMGACVNAPV 166
Score = 39.5 bits (88), Expect = 0.085
Identities = 17/36 (47%), Positives = 26/36 (72%)
Frame = +2
Query: 146 EDNPSIPFEFSQAXQKRVEALLAIYPEGHKRGAMIP 253
E ++ FEFS+ Q+RV+ALLA YP+ +GA++P
Sbjct: 27 EIRKALKFEFSKDNQRRVKALLAWYPQAEWKGALLP 62
>UniRef50_Q0BSK6 Cluster: NADH-quinone oxidoreductase chain E; n=5;
Rhodospirillales|Rep: NADH-quinone oxidoreductase chain
E - Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 227
Score = 68.5 bits (160), Expect = 2e-10
Identities = 46/119 (38%), Positives = 61/119 (51%), Gaps = 6/119 (5%)
Frame = +1
Query: 253 LLDLAQRQSG-----GWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVL 417
LLDLAQRQ G WIP +AM ++A L + +RVYEVATFY M+ RP+G++H+Q+
Sbjct: 49 LLDLAQRQMGRETGSAWIPRAAMDEIARRLGMAPIRVYEVATFYFMYNTRPVGRHHLQLC 108
Query: 418 GLNPRGKXPYPCGFEALMPY*MQLNREPNCE-VGGNSPCGKFSVSEX*NVLGACVNPPI 591
PC + G S G F+++E LGACVN PI
Sbjct: 109 TTT-------PCWLRGSDEVVAACRSATGIQGWGETSEDGMFTMTEV-ECLGACVNAPI 159
Score = 41.1 bits (92), Expect = 0.028
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = +3
Query: 447 PLWLRGSDAILNAIKQGTKL*GWRQQSLWKVFRFRXLKCFGSLCEPPHWLQVND 608
P WLRGSD ++ A + T + GW + S +F ++C G+ P LQV+D
Sbjct: 112 PCWLRGSDEVVAACRSATGIQGWGETSEDGMFTMTEVECLGACVNAP-ILQVDD 164
>UniRef50_P56910 Cluster: NADH-quinone oxidoreductase subunit E 2;
n=3; Rhizobiaceae|Rep: NADH-quinone oxidoreductase
subunit E 2 - Rhizobium meliloti (Sinorhizobium
meliloti)
Length = 168
Score = 60.1 bits (139), Expect = 6e-08
Identities = 39/112 (34%), Positives = 61/112 (54%)
Frame = +1
Query: 256 LDLAQRQSGGWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVLGLNPRG 435
L +AQ++ G +P + +VA+IL + ++ VYE+ATFYT+F PIG++H+Q+
Sbjct: 25 LMIAQKEHGH-LPGPVLEEVAQILGVERVWVYELATFYTLFHTEPIGRFHLQLCD----N 79
Query: 436 KXPYPCGFEALMPY*MQLNREPNCEVGGNSPCGKFSVSEX*NVLGACVNPPI 591
CG EAL+ + L G +P G F++S LGAC P+
Sbjct: 80 VSCMLCGSEALLTH---LETTLGIRKGETTPDGAFTLSTV-ECLGACEMAPV 127
>UniRef50_Q8G1B3 Cluster: NADH dehydrogenase I, E subunit; n=9;
Rhizobiales|Rep: NADH dehydrogenase I, E subunit -
Brucella suis
Length = 237
Score = 57.2 bits (132), Expect = 4e-07
Identities = 29/60 (48%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Frame = +1
Query: 253 LLDLAQRQSGGWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIG-KYHVQVLGLNP 429
LL AQ Q G W+ +++ VA +LN+P +RV EVATFYT F +P+G + H+QV G P
Sbjct: 45 LLMRAQEQEG-WVTKASIEYVAAMLNMPLIRVLEVATFYTQFQLKPVGSRAHIQVCGTTP 103
>UniRef50_Q6MIR6 Cluster: NADH dehydrogenase I chain E; n=1;
Bdellovibrio bacteriovorus|Rep: NADH dehydrogenase I
chain E - Bdellovibrio bacteriovorus
Length = 159
Score = 57.2 bits (132), Expect = 4e-07
Identities = 22/53 (41%), Positives = 40/53 (75%)
Frame = +1
Query: 256 LDLAQRQSGGWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQV 414
L +AQ+++ G+I + +++++++P+ R+ EV FYTMF ++P+GKYHVQV
Sbjct: 32 LYIAQKENNGFITPEIIRTLSQVMDIPEARINEVFKFYTMFNQKPVGKYHVQV 84
>UniRef50_Q83BQ9 Cluster: NADH dehydrogenase I, E subunit; n=3;
Coxiella burnetii|Rep: NADH dehydrogenase I, E subunit -
Coxiella burnetii
Length = 174
Score = 56.8 bits (131), Expect = 5e-07
Identities = 22/49 (44%), Positives = 37/49 (75%)
Frame = +1
Query: 268 QRQSGGWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQV 414
Q+Q+ GW+ +AM+ +A+ L LP++ VYEVATFY M+ +P+GK+ + +
Sbjct: 42 QKQNNGWLSKAAMNALADYLQLPRIWVYEVATFYDMYNLKPMGKHKISI 90
>UniRef50_Q98KQ9 Cluster: NADH-ubiquinone dehydrogenase chain E 1;
n=3; Bacteria|Rep: NADH-ubiquinone dehydrogenase chain E
1 - Rhizobium loti (Mesorhizobium loti)
Length = 424
Score = 56.4 bits (130), Expect = 7e-07
Identities = 41/114 (35%), Positives = 60/114 (52%), Gaps = 1/114 (0%)
Frame = +1
Query: 253 LLDLAQRQSGGWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIG-KYHVQVLGLNP 429
LL LAQ Q G W+ +A+ ++++L +P++R EVATFYT + P+G + H+QV G P
Sbjct: 45 LLMLAQEQEG-WVTKAAIETISDMLGMPRIRGLEVATFYTQYQLNPVGTRAHIQVCGTTP 103
Query: 430 RGKXPYPCGFEALMPY*MQLNREPNCEVGGNSPCGKFSVSEX*NVLGACVNPPI 591
G EALM + + + + G S E LGACVN P+
Sbjct: 104 CMLR----GSEALMDV---CRSKIHHDQFHTNDKGTLSWEEV-ECLGACVNAPM 149
>UniRef50_A3UCV4 Cluster: ATP synthase subunit E; n=4;
Alphaproteobacteria|Rep: ATP synthase subunit E -
Oceanicaulis alexandrii HTCC2633
Length = 346
Score = 56.0 bits (129), Expect = 9e-07
Identities = 28/59 (47%), Positives = 37/59 (62%)
Frame = +1
Query: 253 LLDLAQRQSGGWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVLGLNP 429
LL +AQ+Q W+ AM ++A +P +RVYEVATFYTMF GK+ +QV G P
Sbjct: 43 LLWIAQKQDN-WVSEPAMREIAARCGMPYIRVYEVATFYTMFNLEQTGKHLIQVCGTTP 100
>UniRef50_A6H1R0 Cluster: NADH dehydrogenase I, E subunit; n=2;
Bacteroidetes|Rep: NADH dehydrogenase I, E subunit -
Flavobacterium psychrophilum (strain JIP02/86 / ATCC
49511)
Length = 176
Score = 55.2 bits (127), Expect = 2e-06
Identities = 24/48 (50%), Positives = 32/48 (66%)
Frame = +1
Query: 286 WIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVLGLNP 429
W+ I KVAEIL++ + VYEV +FYTM+ RRPIGKY + +P
Sbjct: 50 WLSIELQDKVAEILHIKPVEVYEVVSFYTMYNRRPIGKYMFEFCQTSP 97
>UniRef50_A4SXP9 Cluster: NADH-quinone oxidoreductase, E subunit;
n=51; Burkholderiales|Rep: NADH-quinone oxidoreductase,
E subunit - Polynucleobacter sp. QLW-P1DMWA-1
Length = 168
Score = 54.8 bits (126), Expect = 2e-06
Identities = 35/110 (31%), Positives = 52/110 (47%)
Frame = +1
Query: 262 LAQRQSGGWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVLGLNPRGKX 441
+A + GW+ + VA+IL +P + V EVATFY M+ +PIGKY + V+ N
Sbjct: 36 IAAQTEVGWVSPEVIEAVAQILEMPTIAVDEVATFYNMYNTKPIGKYKL-VICTN----- 89
Query: 442 PYPCGFEALMPY*MQLNREPNCEVGGNSPCGKFSVSEX*NVLGACVNPPI 591
PC L +PCG F++ E +GAC + P+
Sbjct: 90 -LPCQLTHGETAATYLKETLGIGFNETTPCGTFTLKEG-ECMGACGDSPV 137
>UniRef50_A3U1M2 Cluster: ATP synthase subunit E; n=9;
Alphaproteobacteria|Rep: ATP synthase subunit E -
Oceanicola batsensis HTCC2597
Length = 460
Score = 54.8 bits (126), Expect = 2e-06
Identities = 44/121 (36%), Positives = 58/121 (47%), Gaps = 1/121 (0%)
Frame = +1
Query: 232 QARCHDSLLDLAQRQSGGWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKY-HV 408
QA LL AQ Q G W+ A+ +A +L++ +R EVATFY MF P+G HV
Sbjct: 35 QASAIIPLLWRAQEQEG-WLTRPAIEHIAAMLDMAYIRALEVATFYFMFQLAPVGSVAHV 93
Query: 409 QVLGLNPRGKXPYPCGFEALMPY*MQLNREPNCEVGGNSPCGKFSVSEX*NVLGACVNPP 588
Q+ G CG E L+ ++ EV + GKFS E LGAC N P
Sbjct: 94 QICGTT----SCMICGAEDLIAVCQEMIAPKAHEVSAD---GKFSWEEV-ECLGACANAP 145
Query: 589 I 591
+
Sbjct: 146 M 146
Score = 33.9 bits (74), Expect = 4.2
Identities = 19/52 (36%), Positives = 26/52 (50%)
Frame = +2
Query: 128 VHRDTPEDNPSIPFEFSQAXQKRVEALLAIYPEGHKRGAMIPYWIWHNDRVE 283
+H+D PE F F+ QK EA + YPEG + A+IP +W E
Sbjct: 5 LHKDQPES-----FAFTPENQKWAEAQMTKYPEGRQASAIIPL-LWRAQEQE 50
>UniRef50_Q0C8X0 Cluster: Putative uncharacterized protein; n=1;
Aspergillus terreus NIH2624|Rep: Putative
uncharacterized protein - Aspergillus terreus (strain
NIH 2624)
Length = 312
Score = 54.8 bits (126), Expect = 2e-06
Identities = 26/42 (61%), Positives = 33/42 (78%)
Frame = +1
Query: 253 LLDLAQRQSGGWIPISAMHKVAEILNLPKMRVYEVATFYTMF 378
+LDL QRQ G + IS M++VA +L +P MRVYEVATFYTM+
Sbjct: 180 ILDLGQRQHG-FTSISVMNEVARLLEMPPMRVYEVATFYTMY 220
Score = 52.4 bits (120), Expect = 1e-05
Identities = 24/69 (34%), Positives = 39/69 (56%)
Frame = +2
Query: 47 RTGVQGLWRMSSKSIQTTASRQHDSLFVHRDTPEDNPSIPFEFSQAXQKRVEALLAIYPE 226
R +Q L + + DSL VHR+ P +NPSIPF+F++ K ++ +L YP
Sbjct: 111 RQFLQSLPKTQCRPFSAGPQLYSDSLSVHRNKPNNNPSIPFKFNEQNLKLIDEILKRYPP 170
Query: 227 GHKRGAMIP 253
+K+ A++P
Sbjct: 171 QYKKAAVMP 179
>UniRef50_P56909 Cluster: NADH-quinone oxidoreductase subunit E 1;
n=21; Rhizobiales|Rep: NADH-quinone oxidoreductase
subunit E 1 - Rhizobium meliloti (Sinorhizobium
meliloti)
Length = 275
Score = 54.8 bits (126), Expect = 2e-06
Identities = 29/60 (48%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Frame = +1
Query: 253 LLDLAQRQSGGWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIG-KYHVQVLGLNP 429
LL AQ Q G W+ +A+ VA++L + +RV EVATFYT F +P+G + HVQV G P
Sbjct: 45 LLMRAQEQDG-WVTRAAIESVADMLGMAYIRVLEVATFYTQFQLQPVGTRAHVQVCGTTP 103
>UniRef50_Q11VB6 Cluster: NADH dehydrogenase I chain E; n=2;
Bacteroidetes|Rep: NADH dehydrogenase I chain E -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 177
Score = 54.4 bits (125), Expect = 3e-06
Identities = 22/49 (44%), Positives = 35/49 (71%)
Frame = +1
Query: 253 LLDLAQRQSGGWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGK 399
+L +AQ + GGW+P M VA +L++ + VYEVA+FY+M+ +P+GK
Sbjct: 37 VLHMAQDELGGWLPAPLMDYVASLLDITPIEVYEVASFYSMYNLKPVGK 85
Score = 34.7 bits (76), Expect = 2.4
Identities = 12/29 (41%), Positives = 22/29 (75%)
Frame = +2
Query: 167 FEFSQAXQKRVEALLAIYPEGHKRGAMIP 253
F+FS+A K+++ + A YPEG ++ A++P
Sbjct: 8 FQFSEASLKKIQEMKARYPEGRQKSALLP 36
>UniRef50_Q82TU7 Cluster: Respiratory-chain NADH dehydrogenase 24 Kd
subunit; n=27; Proteobacteria|Rep: Respiratory-chain
NADH dehydrogenase 24 Kd subunit - Nitrosomonas europaea
Length = 162
Score = 52.8 bits (121), Expect = 9e-06
Identities = 24/55 (43%), Positives = 35/55 (63%)
Frame = +1
Query: 250 SLLDLAQRQSGGWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQV 414
S L +AQ + G W+ M +A+ L +P + VYEVATFY M+ +P+GKY + V
Sbjct: 32 SALAIAQDEKG-WLATETMDFIADYLEMPAIAVYEVATFYNMYNLKPVGKYKLTV 85
>UniRef50_A2F771 Cluster: Respiratory-chain NADH dehydrogenase 24 Kd
subunit family protein; n=2; Trichomonas vaginalis|Rep:
Respiratory-chain NADH dehydrogenase 24 Kd subunit
family protein - Trichomonas vaginalis G3
Length = 201
Score = 52.8 bits (121), Expect = 9e-06
Identities = 35/113 (30%), Positives = 58/113 (51%)
Frame = +1
Query: 253 LLDLAQRQSGGWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVLGLNPR 432
LL L QR++GG++ + +++I+ + RV+E A FY+MF +P + V+V +
Sbjct: 52 LLHLGQRENGGYLTTGVLQAISKIVGVTAGRVHETACFYSMFRFQPPNNHIVEVC----K 107
Query: 433 GKXPYPCGFEALMPY*MQLNREPNCEVGGNSPCGKFSVSEX*NVLGACVNPPI 591
G Y G + + + E G SP G+F++ E LGAC N P+
Sbjct: 108 GLSCYLTGSDNVKEAIQKATGGTFKE--GKSPDGQFTLEEV-ECLGACANAPV 157
>UniRef50_Q3ZXM4 Cluster: Hydrogenase subunit HymA; n=13; cellular
organisms|Rep: Hydrogenase subunit HymA -
Dehalococcoides sp. (strain CBDB1)
Length = 161
Score = 52.4 bits (120), Expect = 1e-05
Identities = 35/102 (34%), Positives = 53/102 (51%)
Frame = +1
Query: 286 WIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVLGLNPRGKXPYPCGFEA 465
W+P A++KV++ LN+P RVY VATFY +F P GK++V V G + G
Sbjct: 44 WLPKEALYKVSQTLNVPVNRVYHVATFYKLFSVIPKGKHNVSVC----VGTACHVFGAPK 99
Query: 466 LMPY*MQLNREPNCEVGGNSPCGKFSVSEX*NVLGACVNPPI 591
++ +L + + G + KFS+ E N LG C P+
Sbjct: 100 ILD---RLEKSLGIKAGETTSDLKFSL-ETVNCLGCCALGPV 137
>UniRef50_P29914 Cluster: NADH-quinone oxidoreductase chain 2; n=22;
Alphaproteobacteria|Rep: NADH-quinone oxidoreductase
chain 2 - Paracoccus denitrificans
Length = 239
Score = 52.0 bits (119), Expect = 1e-05
Identities = 40/111 (36%), Positives = 56/111 (50%), Gaps = 2/111 (1%)
Frame = +1
Query: 265 AQRQSGGWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKY-HVQVLGLNPRGKX 441
AQ Q G W+ A+ A++L +P +R EVATFY MF +P+G H+Q+ G
Sbjct: 46 AQEQEG-WLSRPAIEYCADLLGMPYIRALEVATFYFMFQLQPVGSVAHIQICGTT----T 100
Query: 442 PYPCGFEALMPY*MQ-LNREPNCEVGGNSPCGKFSVSEX*NVLGACVNPPI 591
CG E L+ + + EP+ S G+FS E LGAC N P+
Sbjct: 101 CMICGAEDLIRVCKEKIAPEPH----ALSADGRFSWEEV-ECLGACTNAPM 146
>UniRef50_Q0PQQ4 Cluster: NADH dehydrogenase I E subunit; n=1;
Endoriftia persephone 'Hot96_1+Hot96_2'|Rep: NADH
dehydrogenase I E subunit - Endoriftia persephone
'Hot96_1+Hot96_2'
Length = 123
Score = 51.2 bits (117), Expect = 3e-05
Identities = 21/51 (41%), Positives = 34/51 (66%)
Frame = +1
Query: 256 LDLAQRQSGGWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHV 408
L + Q +GGW+ + M VA L++ + VYEVATFY+M+ +P+GK+ +
Sbjct: 41 LRIVQDANGGWLTTALMDDVAAYLDMAPIAVYEVATFYSMYELKPVGKHKI 91
>UniRef50_P0AFD3 Cluster: NADH-quinone oxidoreductase subunit E;
n=66; Gammaproteobacteria|Rep: NADH-quinone
oxidoreductase subunit E - Shigella flexneri
Length = 166
Score = 50.8 bits (116), Expect = 3e-05
Identities = 20/52 (38%), Positives = 35/52 (67%)
Frame = +1
Query: 256 LDLAQRQSGGWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQ 411
L + Q+Q G W+P A+H +A++L +P V VATFY+ R+P+G++ ++
Sbjct: 40 LKIVQKQRG-WVPDGAIHAIADVLGIPASDVEGVATFYSQIFRQPVGRHVIR 90
>UniRef50_Q9PGJ1 Cluster: NADH-ubiquinone oxidoreductase, NQO2
subunit; n=13; Gammaproteobacteria|Rep: NADH-ubiquinone
oxidoreductase, NQO2 subunit - Xylella fastidiosa
Length = 175
Score = 50.4 bits (115), Expect = 5e-05
Identities = 32/109 (29%), Positives = 54/109 (49%)
Frame = +1
Query: 265 AQRQSGGWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVLGLNPRGKXP 444
AQ Q+ GW+ + VA+ L++P + YEVATFY+MF R +G+++V
Sbjct: 50 AQEQNQGWLTDELIAAVAKYLDIPSVWAYEVATFYSMFETRKVGRHNVAFC----TNVSC 105
Query: 445 YPCGFEALMPY*MQLNREPNCEVGGNSPCGKFSVSEX*NVLGACVNPPI 591
+ G E L+ Y + C++G ++ G+ + L AC P+
Sbjct: 106 WLNGAEDLVSY---AEEKLGCKLGQSTADGRVYLKCEEECLAACAGAPM 151
>UniRef50_Q8ABI7 Cluster: NADH-ubiquinone oxidoreductase subunit;
n=3; Bacteroides|Rep: NADH-ubiquinone oxidoreductase
subunit - Bacteroides thetaiotaomicron
Length = 158
Score = 50.4 bits (115), Expect = 5e-05
Identities = 34/103 (33%), Positives = 49/103 (47%)
Frame = +1
Query: 283 GWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVLGLNPRGKXPYPCGFE 462
G++P +A L +P +VY V TFYT F P GK+ + V G Y G E
Sbjct: 40 GYLPEEMQRIIASKLRIPVSKVYGVVTFYTFFTMTPKGKHPISVC----MGTACYVRGSE 95
Query: 463 ALMPY*MQLNREPNCEVGGNSPCGKFSVSEX*NVLGACVNPPI 591
L+ + R EVG +P GK+S+ + +GAC P+
Sbjct: 96 KLLE---EFKRVLGIEVGETTPDGKYSL-DCLRCVGACGLAPV 134
>UniRef50_A7HLQ9 Cluster: NADH-quinone oxidoreductase, E subunit;
n=3; Thermotogaceae|Rep: NADH-quinone oxidoreductase, E
subunit - Fervidobacterium nodosum Rt17-B1
Length = 161
Score = 50.4 bits (115), Expect = 5e-05
Identities = 35/102 (34%), Positives = 50/102 (49%)
Frame = +1
Query: 286 WIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVLGLNPRGKXPYPCGFEA 465
+IP +AE LN+P +VYEV TFYTMF +P GKY ++V P P G E
Sbjct: 39 YIPPEVGEMIAEELNIPSSKVYEVLTFYTMFSTKPRGKYIIRVCTSLP---CHVPGGREI 95
Query: 466 LMPY*MQLNREPNCEVGGNSPCGKFSVSEX*NVLGACVNPPI 591
+ L ++ + G + G F++ E LG C P+
Sbjct: 96 V----QFLKQKLGVDFGETTKDGLFTLEET-GCLGLCGVSPV 132
>UniRef50_Q5JIQ1 Cluster: NADH:ubiquinone oxidoreductase, subunit E;
n=2; cellular organisms|Rep: NADH:ubiquinone
oxidoreductase, subunit E - Pyrococcus kodakaraensis
(Thermococcus kodakaraensis)
Length = 154
Score = 49.6 bits (113), Expect = 8e-05
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Frame = +1
Query: 250 SLLDLAQR--QSGGWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQV 414
SL+ L QR + G++P + ++A L +P RVY VATFY F P+GKY V+V
Sbjct: 17 SLIPLLQRTQERFGYLPREVLEEIANYLGIPLSRVYGVATFYAQFRFEPLGKYVVKV 73
>UniRef50_A7CUG1 Cluster: NADH-quinone oxidoreductase, E subunit;
n=1; Opitutaceae bacterium TAV2|Rep: NADH-quinone
oxidoreductase, E subunit - Opitutaceae bacterium TAV2
Length = 163
Score = 48.8 bits (111), Expect = 1e-04
Identities = 24/54 (44%), Positives = 35/54 (64%)
Frame = +1
Query: 253 LLDLAQRQSGGWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQV 414
LL L Q + G+I AM +A+ L + ++ V EV TFY MF R+PIG+ H++V
Sbjct: 28 LLHLIQ-EDAGYISDEAMEWIADKLGIERIHVLEVVTFYPMFRRKPIGRRHIKV 80
>UniRef50_A5UZH6 Cluster: NADH-quinone oxidoreductase, E subunit;
n=5; Chloroflexi (class)|Rep: NADH-quinone
oxidoreductase, E subunit - Roseiflexus sp. RS-1
Length = 174
Score = 48.8 bits (111), Expect = 1e-04
Identities = 34/113 (30%), Positives = 56/113 (49%)
Frame = +1
Query: 253 LLDLAQRQSGGWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVLGLNPR 432
LL +AQ + G ++ +AM +VAE+L++P V+EVA FY++ +P+GK+ +QV
Sbjct: 28 LLFIAQDEYG-YLTEAAMREVAELLDMPPTDVFEVAGFYSLLYEQPVGKWVLQVC----- 81
Query: 433 GKXPYPCGFEALMPY*MQLNREPNCEVGGNSPCGKFSVSEX*NVLGACVNPPI 591
PC F L + V +P G F++ L C + P+
Sbjct: 82 --DDVPCAFCGAEDLIATLQAKLGIGVDQTTPDGMFTLQRV-KCLADCDHAPV 131
>UniRef50_Q746S5 Cluster: NADH dehydrogenase I, E subunit; n=4;
Desulfuromonadales|Rep: NADH dehydrogenase I, E subunit
- Geobacter sulfurreducens
Length = 162
Score = 48.4 bits (110), Expect = 2e-04
Identities = 35/102 (34%), Positives = 50/102 (49%)
Frame = +1
Query: 283 GWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVLGLNPRGKXPYPCGFE 462
GW+ A+ + AE+L L ++V E+ATFY M RRP+GK + V + G E
Sbjct: 36 GWLTDEAVGEAAELLGLTPLQVEELATFYEMIYRRPVGKRVIHVCD----SISCWALGGE 91
Query: 463 ALMPY*MQLNREPNCEVGGNSPCGKFSVSEX*NVLGACVNPP 588
+LM + L N E GG + G F++ LG C P
Sbjct: 92 SLMAH---LAAALNIEPGGTTADGLFTLLPC-CCLGNCGEAP 129
>UniRef50_Q67JG1 Cluster: Putative iron hydrogenase small subunit
gamma; n=3; Firmicutes|Rep: Putative iron hydrogenase
small subunit gamma - Symbiobacterium thermophilum
Length = 186
Score = 48.0 bits (109), Expect = 2e-04
Identities = 35/103 (33%), Positives = 46/103 (44%)
Frame = +1
Query: 283 GWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVLGLNPRGKXPYPCGFE 462
G++P VA L++P VY V TFY F P+GKY + V G Y G
Sbjct: 46 GFLPEEVQRHVAAALHVPPSEVYGVVTFYNYFTLTPVGKYPINVC----MGTACYVQGAG 101
Query: 463 ALMPY*MQLNREPNCEVGGNSPCGKFSVSEX*NVLGACVNPPI 591
L+ RE + G +P G FS+ E LGAC P+
Sbjct: 102 RLLSL---FERELGIQPGQVTPDGLFSL-EVCRCLGACGLAPV 140
>UniRef50_Q2LQE7 Cluster: NADH-quinone oxidoreductase chain F; n=1;
Syntrophus aciditrophicus SB|Rep: NADH-quinone
oxidoreductase chain F - Syntrophus aciditrophicus
(strain SB)
Length = 574
Score = 48.0 bits (109), Expect = 2e-04
Identities = 32/113 (28%), Positives = 60/113 (53%), Gaps = 1/113 (0%)
Frame = +1
Query: 256 LDLAQRQSGGWIPISAMHKVAEILNLPKMRVYEVATFYTMF-IRRPIGKYHVQVLGLNPR 432
L LAQ+++ + + VAE++++P + Y +AT+Y+M+ + +P+G+YH+QV P
Sbjct: 28 LMLAQKENANRLDQDDIRTVAELVDVPFGKAYGLATYYSMYNVEKPVGRYHLQVDTNIPA 87
Query: 433 GKXPYPCGFEALMPY*MQLNREPNCEVGGNSPCGKFSVSEX*NVLGACVNPPI 591
G ++ + L + N G +P G F++SE L +C P+
Sbjct: 88 TL----MGAGEILDH---LEKTLNIRAGETTPDGLFTLSEV-ECLASCGTCPV 132
>UniRef50_Q8RBD2 Cluster: NADH:ubiquinone oxidoreductase 24 kD
subunit; n=3; Thermoanaerobacter|Rep: NADH:ubiquinone
oxidoreductase 24 kD subunit - Thermoanaerobacter
tengcongensis
Length = 169
Score = 47.2 bits (107), Expect = 4e-04
Identities = 29/103 (28%), Positives = 51/103 (49%)
Frame = +1
Query: 283 GWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVLGLNPRGKXPYPCGFE 462
G++PI +++ + +P ++ ++TFY+ F +P GKY + + G Y G
Sbjct: 51 GYLPIEVQLFISQEMKVPLTEIFGISTFYSRFTLKPSGKYKINLC----MGTACYVRGAA 106
Query: 463 ALMPY*MQLNREPNCEVGGNSPCGKFSVSEX*NVLGACVNPPI 591
L+ ++ + EVG + GKFS+ E LGAC P+
Sbjct: 107 MLLE---KIKEKLGIEVGETTEDGKFSL-EPTRCLGACALAPV 145
>UniRef50_Q67P18 Cluster: NADH dehydrogenase I subunit E; n=1;
Symbiobacterium thermophilum|Rep: NADH dehydrogenase I
subunit E - Symbiobacterium thermophilum
Length = 274
Score = 47.2 bits (107), Expect = 4e-04
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +1
Query: 253 LLDLAQRQ-SGGWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVLG 420
LL LA R+ G +I S + VAEI + V V +FYTMF R+P+GKY + V G
Sbjct: 37 LLHLAMREREGRYIAQSDIEAVAEICGVAPSYVQSVCSFYTMFRRQPVGKYLITVCG 93
>UniRef50_A6FCN2 Cluster: NuoE2 NADH I CHAIN E; n=1; Moritella sp.
PE36|Rep: NuoE2 NADH I CHAIN E - Moritella sp. PE36
Length = 207
Score = 47.2 bits (107), Expect = 4e-04
Identities = 22/53 (41%), Positives = 40/53 (75%)
Frame = +1
Query: 256 LDLAQRQSGGWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQV 414
L LAQ + G++ +A +AEIL++P++ V+E+A+FYT++ + IGKY++Q+
Sbjct: 36 LYLAQ-DTYGFLDETAYRAIAEILDIPEIWVFELASFYTLYKNKKIGKYNLQL 87
>UniRef50_A3ERJ3 Cluster: NADH ubiquinone oxidoreductase 24 kD
subunit; n=2; Leptospirillum|Rep: NADH ubiquinone
oxidoreductase 24 kD subunit - Leptospirillum sp. Group
II UBA
Length = 168
Score = 46.8 bits (106), Expect = 6e-04
Identities = 18/44 (40%), Positives = 30/44 (68%)
Frame = +1
Query: 283 GWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQV 414
G++P A+ V EIL +PK ++Y V TFY+ F + P GK+ +++
Sbjct: 40 GYVPADALEFVGEILEIPKSKMYGVLTFYSQFYQEPRGKFVLKI 83
>UniRef50_Q2RHR8 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Moorella thermoacetica ATCC 39073|Rep:
NADH dehydrogenase (Ubiquinone), 24 kDa subunit -
Moorella thermoacetica (strain ATCC 39073)
Length = 157
Score = 46.4 bits (105), Expect = 7e-04
Identities = 30/103 (29%), Positives = 51/103 (49%)
Frame = +1
Query: 283 GWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVLGLNPRGKXPYPCGFE 462
G++P + +A+ L L +VY V +FY F +P GKY V V G + G
Sbjct: 39 GYLPRNVQVAIADGLGLSLSQVYSVVSFYNHFTTKPKGKYQVSVC----MGTACFVKGAP 94
Query: 463 ALMPY*MQLNREPNCEVGGNSPCGKFSVSEX*NVLGACVNPPI 591
A++ +L +E +VG + G+F++++ LG C P+
Sbjct: 95 AILE---RLEQELGTKVGDTTADGRFTINQV-RCLGCCALGPV 133
>UniRef50_Q2LYE8 Cluster: NADH:ubiquinone oxidoreductase 24 kD
subunit NuoE; n=1; Syntrophus aciditrophicus SB|Rep:
NADH:ubiquinone oxidoreductase 24 kD subunit NuoE -
Syntrophus aciditrophicus (strain SB)
Length = 173
Score = 46.0 bits (104), Expect = 0.001
Identities = 32/102 (31%), Positives = 50/102 (49%)
Frame = +1
Query: 286 WIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVLGLNPRGKXPYPCGFEA 465
++P A+ V++ L +P R+YE+ATFY +F +P GKY ++V G + G
Sbjct: 50 YLPKEALTIVSDELQVPLSRIYEIATFYNVFSLKPRGKYLIEVCA----GTACHVQGGFN 105
Query: 466 LMPY*MQLNREPNCEVGGNSPCGKFSVSEX*NVLGACVNPPI 591
LM +L R N G + F++ E LG C P+
Sbjct: 106 LM---NRLERNLNISCGETTEDAMFTLEEV-RCLGCCSLAPV 143
>UniRef50_Q0AZ71 Cluster: NADH:ubiquinone oxidoreductase 24 kD
subunit-like protein precursor; n=4; Clostridiales|Rep:
NADH:ubiquinone oxidoreductase 24 kD subunit-like
protein precursor - Syntrophomonas wolfei subsp. wolfei
(strain Goettingen)
Length = 182
Score = 45.6 bits (103), Expect = 0.001
Identities = 32/103 (31%), Positives = 50/103 (48%)
Frame = +1
Query: 283 GWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVLGLNPRGKXPYPCGFE 462
G++P+S + +A L + +VY +ATFYT F +P GKY + +G + G E
Sbjct: 51 GYLPLSVLKCIARELGIKPAKVYGIATFYTQFRLQPAGKYQIMFC----QGTACHVNGSE 106
Query: 463 ALMPY*MQLNREPNCEVGGNSPCGKFSVSEX*NVLGACVNPPI 591
+ L +E + G +P G FS+ E LG C P+
Sbjct: 107 RIE---STLCQELKIKRGETTPDGLFSL-ESAACLGCCSLAPV 145
>UniRef50_A1WXW3 Cluster: NADH-quinone oxidoreductase, E subunit;
n=1; Halorhodospira halophila SL1|Rep: NADH-quinone
oxidoreductase, E subunit - Halorhodospira halophila
(strain DSM 244 / SL1) (Ectothiorhodospirahalophila
(strain DSM 244 / SL1))
Length = 170
Score = 45.6 bits (103), Expect = 0.001
Identities = 19/52 (36%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Frame = +1
Query: 256 LDLAQRQSGGWIPISAMHKVAEILNLPKMRVYEVATFYTMF-IRRPIGKYHV 408
L + Q +GGW+ S + A+ + +P+ +EVATFY+MF + P+G++ V
Sbjct: 41 LHILQDDNGGWLERSHVAAAADYIGMPRASAFEVATFYSMFHLDEPVGRHKV 92
>UniRef50_Q608Y0 Cluster: NADH dehydrogenase I, E subunit; n=5;
Bacteria|Rep: NADH dehydrogenase I, E subunit -
Methylococcus capsulatus
Length = 157
Score = 45.2 bits (102), Expect = 0.002
Identities = 23/63 (36%), Positives = 35/63 (55%)
Frame = +1
Query: 211 GHLP*RSQARCHDSLLDLAQRQSGGWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRP 390
GH P S A L++ QR S GWI + ++AE+L + + +ATFY + RRP
Sbjct: 16 GHFPHPSAAAIE--ALNIVQR-SHGWISDELLQEIAELLGMSPAELDSIATFYNLIYRRP 72
Query: 391 IGK 399
+G+
Sbjct: 73 VGR 75
>UniRef50_Q1PYY2 Cluster: Similar to nuoE subunit of the
NADH:ubiquinone oxidoreductase; n=2; Candidatus Kuenenia
stuttgartiensis|Rep: Similar to nuoE subunit of the
NADH:ubiquinone oxidoreductase - Candidatus Kuenenia
stuttgartiensis
Length = 162
Score = 44.0 bits (99), Expect = 0.004
Identities = 22/63 (34%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Frame = +1
Query: 229 SQARCHDSLLDLAQRQSG-GWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYH 405
S+A +D + L + Q G++P++AM +V+ ++P R+Y V TFY+ F + P GK+
Sbjct: 26 SRAASNDLIPILQEMQEEYGYLPLTAMEEVSVRTDIPLSRIYGVVTFYSQFSQVPRGKHT 85
Query: 406 VQV 414
V++
Sbjct: 86 VRL 88
>UniRef50_Q0EZQ5 Cluster: NADH dehydrogenase I chain E; n=1;
Mariprofundus ferrooxydans PV-1|Rep: NADH dehydrogenase
I chain E - Mariprofundus ferrooxydans PV-1
Length = 170
Score = 44.0 bits (99), Expect = 0.004
Identities = 22/54 (40%), Positives = 34/54 (62%)
Frame = +1
Query: 253 LLDLAQRQSGGWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQV 414
+L +AQ + G++ + VA++L L M+V EV TFYTMF +P G Y ++V
Sbjct: 37 VLYMAQ-EDFGYLSMDVQQHVADVLGLRLMQVREVVTFYTMFREKPCGTYLLEV 89
>UniRef50_A5D2H5 Cluster: NADH:ubiquinone oxidoreductase 24 kD
subunit; n=1; Pelotomaculum thermopropionicum SI|Rep:
NADH:ubiquinone oxidoreductase 24 kD subunit -
Pelotomaculum thermopropionicum SI
Length = 192
Score = 43.6 bits (98), Expect = 0.005
Identities = 32/103 (31%), Positives = 47/103 (45%)
Frame = +1
Query: 283 GWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVLGLNPRGKXPYPCGFE 462
G++P +AE L +P V V TFY++F RP GKY + V G Y G +
Sbjct: 64 GYLPDDVQAFIAERLRVPVAEVNGVVTFYSLFSTRPKGKYIINVC----MGTACYVKGAQ 119
Query: 463 ALMPY*MQLNREPNCEVGGNSPCGKFSVSEX*NVLGACVNPPI 591
+M L + + G +P G F++ +GAC PI
Sbjct: 120 QVMD---ALKKRLKIDEGETTPDGLFTLKST-RCVGACGLAPI 158
>UniRef50_A4J528 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Desulfotomaculum reducens MI-1|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa subunit -
Desulfotomaculum reducens MI-1
Length = 158
Score = 42.7 bits (96), Expect = 0.009
Identities = 33/109 (30%), Positives = 51/109 (46%)
Frame = +1
Query: 265 AQRQSGGWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVLGLNPRGKXP 444
A ++S G++P + + AE L +P VY VATFY F RP G++ V + G
Sbjct: 34 AIQESQGYLPKDLLVRTAEELGVPLSDVYGVATFYAAFSLRPRGRHSVNLC----LGTAC 89
Query: 445 YPCGFEALMPY*MQLNREPNCEVGGNSPCGKFSVSEX*NVLGACVNPPI 591
Y G + L +E + G + +FS+ + LGAC P+
Sbjct: 90 YVKGAPEVQ---SMLEKEMGIKAGNTTEDRRFSL-DLVRCLGACGIAPV 134
>UniRef50_Q6MDR2 Cluster: Putative NADH-ubiquinone oxidoreductase
chain E; n=1; Candidatus Protochlamydia amoebophila
UWE25|Rep: Putative NADH-ubiquinone oxidoreductase chain
E - Protochlamydia amoebophila (strain UWE25)
Length = 159
Score = 42.3 bits (95), Expect = 0.012
Identities = 19/53 (35%), Positives = 31/53 (58%)
Frame = +1
Query: 256 LDLAQRQSGGWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQV 414
L LAQ + G ++PI +++A + +L V + TFY MF P+GK+ + V
Sbjct: 16 LHLAQAEKG-YLPIEVQNELAFLFDLEPSEVNSIVTFYDMFFEEPVGKHVIHV 67
>UniRef50_A0UVM6 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Clostridium cellulolyticum H10|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa subunit - Clostridium
cellulolyticum H10
Length = 163
Score = 42.3 bits (95), Expect = 0.012
Identities = 22/59 (37%), Positives = 32/59 (54%)
Frame = +1
Query: 253 LLDLAQRQSGGWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVLGLNP 429
+L+L +P + VAE L++P +VY V TFY+MF P G+Y V+V P
Sbjct: 29 MLELQSMSGTNSLPHEWVVFVAEALDMPVSKVYSVITFYSMFGTEPRGRYLVEVCKSGP 87
>UniRef50_Q7NZH7 Cluster: NADH-ubiquinone oxidoreductase, chain E;
n=8; Betaproteobacteria|Rep: NADH-ubiquinone
oxidoreductase, chain E - Chromobacterium violaceum
Length = 166
Score = 41.9 bits (94), Expect = 0.016
Identities = 25/93 (26%), Positives = 44/93 (47%)
Frame = +1
Query: 313 VAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVLGLNPRGKXPYPCGFEALMPY*MQLN 492
VA L + + YEVATFY M+ +P+GK+ + V PC + ++
Sbjct: 57 VANYLGIAPVAAYEVATFYNMYDMKPVGKFKITVC-------TNLPCALSGGVNAAEYIS 109
Query: 493 REPNCEVGGNSPCGKFSVSEX*NVLGACVNPPI 591
++ +G S G +++ E +GAC + P+
Sbjct: 110 KKLGIAIGETSADGMYTLLEG-ECMGACGDAPV 141
>UniRef50_Q02CT9 Cluster: NADH-quinone oxidoreductase, E subunit;
n=1; Solibacter usitatus Ellin6076|Rep: NADH-quinone
oxidoreductase, E subunit - Solibacter usitatus (strain
Ellin6076)
Length = 160
Score = 41.9 bits (94), Expect = 0.016
Identities = 18/44 (40%), Positives = 29/44 (65%)
Frame = +1
Query: 283 GWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQV 414
G + + +VA + + ++V EV T+Y+M R+P+GKYHVQV
Sbjct: 39 GCVSDELIAEVARRIGVTPLQVNEVLTYYSMLHRKPLGKYHVQV 82
>UniRef50_Q6A6G2 Cluster: NADH dehydrogenase I chain E; n=1;
Propionibacterium acnes|Rep: NADH dehydrogenase I chain
E - Propionibacterium acnes
Length = 261
Score = 41.5 bits (93), Expect = 0.021
Identities = 34/113 (30%), Positives = 53/113 (46%)
Frame = +1
Query: 253 LLDLAQRQSGGWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVLGLNPR 432
+L L Q G P+ + AE+L + +V VATFYTM+ + P G++H+ G+
Sbjct: 61 ILHLVQSVDGRISPVG-IETAAEVLGITTAQVSGVATFYTMYKKHPAGQHHI---GVCTT 116
Query: 433 GKXPYPCGFEALMPY*MQLNREPNCEVGGNSPCGKFSVSEX*NVLGACVNPPI 591
G E L ++ ++ + G +P GKFS+ E AC PI
Sbjct: 117 ALCAVMGGEEVL----ARVEKKLGIKEGQTTPDGKFSL-ERVECNAACDFAPI 164
>UniRef50_Q0PIE2 Cluster: NAD(P)H-quinone oxidoreductase 24 kDa
subunit; n=1; Heliobacillus mobilis|Rep: NAD(P)H-quinone
oxidoreductase 24 kDa subunit - Heliobacillus mobilis
Length = 171
Score = 41.5 bits (93), Expect = 0.021
Identities = 29/102 (28%), Positives = 46/102 (45%)
Frame = +1
Query: 286 WIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVLGLNPRGKXPYPCGFEA 465
+IP +M +A+ L LP ++Y +ATFY RP GK+ +++ C +
Sbjct: 39 FIPRESMELIADYLELPLSKIYSLATFYKALSLRPKGKHVIKIC-------DGTACHIRS 91
Query: 466 LMPY*MQLNREPNCEVGGNSPCGKFSVSEX*NVLGACVNPPI 591
+L G + G+FS+ E N LGAC P+
Sbjct: 92 SQMLANELYTLLKIRPGETTEDGQFSI-EMVNCLGACAIAPV 132
>UniRef50_A7IL17 Cluster: NADH dehydrogenase (Ubiquinone) 24 kDa
subunit; n=3; Alphaproteobacteria|Rep: NADH
dehydrogenase (Ubiquinone) 24 kDa subunit - Xanthobacter
sp. (strain Py2)
Length = 176
Score = 41.5 bits (93), Expect = 0.021
Identities = 32/108 (29%), Positives = 53/108 (49%)
Frame = +1
Query: 265 AQRQSGGWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVLGLNPRGKXP 444
A +++ G++P A+ +AE LNL + VY V TFY F R G++ V++ +
Sbjct: 44 ALQETFGFVPDPAVPMIAESLNLSRAEVYGVLTFYHDFRREAPGRHVVKLCA----AEAC 99
Query: 445 YPCGFEALMPY*MQLNREPNCEVGGNSPCGKFSVSEX*NVLGACVNPP 588
G +AL Y + + ++G SP G+ ++ E LG C P
Sbjct: 100 QSVGGKALAQY---VEEKLGVDMGSTSPDGRVTL-EPIYCLGLCACAP 143
>UniRef50_Q9WXM7 Cluster: NADP-reducing hydrogenase, subunit A; n=4;
Thermotogaceae|Rep: NADP-reducing hydrogenase, subunit A
- Thermotoga maritima
Length = 176
Score = 41.1 bits (92), Expect = 0.028
Identities = 15/44 (34%), Positives = 28/44 (63%)
Frame = +1
Query: 283 GWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQV 414
G++P + +++ L++P +VY V TFY F +P GK+ ++V
Sbjct: 54 GYLPADVLEYISDKLDVPLSKVYGVVTFYNFFSTKPKGKHQIKV 97
>UniRef50_A6PRE1 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Victivallis vadensis ATCC BAA-548|Rep:
NADH dehydrogenase (Ubiquinone), 24 kDa subunit -
Victivallis vadensis ATCC BAA-548
Length = 176
Score = 41.1 bits (92), Expect = 0.028
Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 2/120 (1%)
Frame = +1
Query: 238 RCHDSLLDLAQRQSG--GWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQ 411
R SL+ + R G++ VA LN+ + VY V +FY+ FI +PIG+Y +
Sbjct: 40 RRRGSLIQILHRAQHLFGYLSEEVQSFVAARLNISRAEVYGVISFYSYFIDQPIGRYKIN 99
Query: 412 VLGLNPRGKXPYPCGFEALMPY*MQLNREPNCEVGGNSPCGKFSVSEX*NVLGACVNPPI 591
V G + G ++ + R G ++P GKF + +GAC P+
Sbjct: 100 VC----TGTACFVKGAPKVLD---EFKRRLEIREGESTPDGKFFLGAL-RCVGACSLAPV 151
>UniRef50_A0LJN9 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=3; Deltaproteobacteria|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa subunit -
Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB)
Length = 163
Score = 41.1 bits (92), Expect = 0.028
Identities = 26/88 (29%), Positives = 44/88 (50%)
Frame = +1
Query: 283 GWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVLGLNPRGKXPYPCGFE 462
G++ AM + A IL + + + E+ATFY R P+G+Y + V + G++
Sbjct: 36 GYMTDEAMEEAAGILGMTTLELEELATFYDHIYRSPVGRYVIHVCD----SAVCWMEGYQ 91
Query: 463 ALMPY*MQLNREPNCEVGGNSPCGKFSV 546
++ Y L + VGG SP G F++
Sbjct: 92 RIIDY---LCQRLKLTVGGTSPDGLFTL 116
>UniRef50_Q0AVX7 Cluster: Fe-hydrogenase, gamma subunit; n=4;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
Fe-hydrogenase, gamma subunit - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 148
Score = 40.3 bits (90), Expect = 0.049
Identities = 28/109 (25%), Positives = 50/109 (45%)
Frame = +1
Query: 265 AQRQSGGWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVLGLNPRGKXP 444
A ++ +IP A+ A++ ++P+ + Y VATFY+ P GK +++
Sbjct: 24 AVQKEYSYIPEDAVVYAAQVFDIPEAKAYGVATFYSYLKVGPRGKNVIRIC-------ES 76
Query: 445 YPCGFEALMPY*MQLNREPNCEVGGNSPCGKFSVSEX*NVLGACVNPPI 591
PC L +E ++G +P GKF++ E +G C P+
Sbjct: 77 APCHIAGADKVVAALEKELGIKMGETTPDGKFTL-EFAECVGQCQATPV 124
>UniRef50_P65574 Cluster: NADH-quinone oxidoreductase subunit E;
n=23; Actinomycetales|Rep: NADH-quinone oxidoreductase
subunit E - Mycobacterium bovis
Length = 252
Score = 40.3 bits (90), Expect = 0.049
Identities = 29/81 (35%), Positives = 40/81 (49%)
Frame = +1
Query: 172 VLAGXSKESRGFVGHLP*RSQARCHDSLLDLAQRQSGGWIPISAMHKVAEILNLPKMRVY 351
VLA +++ +G P R A LL L Q + P + + A+ L L V
Sbjct: 36 VLARLEVDAKEIIGRYPDRRSALL--PLLHLVQGEDSYLTP-AGLRFCADQLGLTGAEVS 92
Query: 352 EVATFYTMFIRRPIGKYHVQV 414
VA+FYTM+ RRP G+Y V V
Sbjct: 93 AVASFYTMYRRRPTGEYLVGV 113
>UniRef50_O13691 Cluster: Probable NADH-ubiquinone oxidoreductase 24
kDa subunit, mitochondrial precursor; n=1;
Schizosaccharomyces pombe|Rep: Probable NADH-ubiquinone
oxidoreductase 24 kDa subunit, mitochondrial precursor -
Schizosaccharomyces pombe (Fission yeast)
Length = 162
Score = 40.3 bits (90), Expect = 0.049
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +1
Query: 196 SRGFVGHLP*RSQARCHDSLLDLAQRQSGGWIPISAMHKVAEILNLPKMRVYEVATFY-T 372
++ + P R Q+ LLDLAQRQ G WIP +AM+++A + + V+ + Y
Sbjct: 15 AKAILARYPLRFQSAALVPLLDLAQRQHGTWIPPTAMYEIASLAGVSIDYVHSLILAYPN 74
Query: 373 MFIRRP 390
F RP
Sbjct: 75 DFFWRP 80
>UniRef50_Q2JFL6 Cluster: NADH-quinone oxidoreductase, E subunit;
n=5; Actinomycetales|Rep: NADH-quinone oxidoreductase, E
subunit - Frankia sp. (strain CcI3)
Length = 262
Score = 39.9 bits (89), Expect = 0.064
Identities = 21/54 (38%), Positives = 30/54 (55%)
Frame = +1
Query: 253 LLDLAQRQSGGWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQV 414
LL L Q + G + + A++L + + V VATFYTM+ R P+G Y V V
Sbjct: 30 LLHLVQAEQG-CVTAQGVAFCADVLGITRAEVGAVATFYTMYKRHPVGDYLVSV 82
>UniRef50_Q1NQY7 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=5; Bacteria|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - delta proteobacterium
MLMS-1
Length = 200
Score = 39.9 bits (89), Expect = 0.064
Identities = 20/46 (43%), Positives = 28/46 (60%)
Frame = +1
Query: 265 AQRQSGGWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKY 402
A +QS G+I AM ++A L LP +VY V TFY F +P G++
Sbjct: 43 AVQQSYGYIDEEAMGRLATALTLPLSKVYGVVTFYHFFHLKPKGRH 88
>UniRef50_Q0AWA4 Cluster: NADH:ubiquinone oxidoreductase 24 kD
subunit NuoE precursor; n=1; Syntrophomonas wolfei
subsp. wolfei str. Goettingen|Rep: NADH:ubiquinone
oxidoreductase 24 kD subunit NuoE precursor -
Syntrophomonas wolfei subsp. wolfei (strain Goettingen)
Length = 166
Score = 39.9 bits (89), Expect = 0.064
Identities = 16/43 (37%), Positives = 29/43 (67%)
Frame = +1
Query: 286 WIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQV 414
++P SA+ AE + +P +VY +ATFY F +P G+++++V
Sbjct: 40 YLPRSALELTAEYVGVPFSQVYSMATFYRAFSLQPRGRFNIKV 82
>UniRef50_Q092T1 Cluster: NADH-ubiquinone oxidoreductase 24 kDa
subunit; n=2; Cystobacterineae|Rep: NADH-ubiquinone
oxidoreductase 24 kDa subunit - Stigmatella aurantiaca
DW4/3-1
Length = 162
Score = 39.9 bits (89), Expect = 0.064
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +1
Query: 283 GWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQV 414
GW P + VA+ L + R YEVA+FY M+ + GKY + V
Sbjct: 46 GWCPPEGIRLVAKNLEVTPERAYEVASFYVMYHLKKPGKYTIDV 89
>UniRef50_A4M6K3 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=2; Bacteria|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Petrotoga mobilis SJ95
Length = 154
Score = 39.9 bits (89), Expect = 0.064
Identities = 18/48 (37%), Positives = 32/48 (66%)
Frame = +1
Query: 271 RQSGGWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQV 414
+++ G+I + ++A+ ++PK R+Y V +FY+MF P GKY V+V
Sbjct: 32 QETYGFISEEDILRIAQKRDIPKARLYGVISFYSMFHLEPTGKYIVRV 79
>UniRef50_A1AVR6 Cluster: NADH-quinone oxidoreductase, E subunit;
n=2; sulfur-oxidizing symbionts|Rep: NADH-quinone
oxidoreductase, E subunit - Ruthia magnifica subsp.
Calyptogena magnifica
Length = 157
Score = 39.9 bits (89), Expect = 0.064
Identities = 33/137 (24%), Positives = 59/137 (43%)
Frame = +1
Query: 181 GXSKESRGFVGHLP*RSQARCHDSLLDLAQRQSGGWIPISAMHKVAEILNLPKMRVYEVA 360
G K+ ++ P ++ L + Q ++ + + VA+ L++P + V EVA
Sbjct: 5 GAKKQIDAWIAKYPKDRKSSAVMQTLKIIQAENENKLSADTIQAVADYLDMPDIAVQEVA 64
Query: 361 TFYTMFIRRPIGKYHVQVLGLNPRGKXPYPCGFEALMPY*MQLNREPNCEVGGNSPCGKF 540
TFY + + +GKY ++ G + L+ Y L + + +P G
Sbjct: 65 TFYENYNHKKVGKYVIRFC----HNISCMLNGADDLIAY---LENKLGVQTDEVTPDGLI 117
Query: 541 SVSEX*NVLGACVNPPI 591
SV + LGACV P+
Sbjct: 118 SVKKV-ECLGACVGAPM 133
>UniRef50_Q89AU3 Cluster: NADH-quinone oxidoreductase subunit E;
n=1; Buchnera aphidicola (Baizongia pistaciae)|Rep:
NADH-quinone oxidoreductase subunit E - Buchnera
aphidicola subsp. Baizongia pistaciae
Length = 171
Score = 39.9 bits (89), Expect = 0.064
Identities = 19/52 (36%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Frame = +1
Query: 250 SLLDLAQ--RQSGGWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGK 399
SL+++ + ++S GWI + ++A IL + K + E+ATFY+ R+PIG+
Sbjct: 40 SLIEILKFVQKSYGWISNELITELACILKISKCDIEEIATFYSQIFRQPIGR 91
>UniRef50_O27591 Cluster: NADP-reducing hydrogenase, subunit A; n=1;
Methanothermobacter thermautotrophicus str. Delta H|Rep:
NADP-reducing hydrogenase, subunit A - Methanobacterium
thermoautotrophicum
Length = 149
Score = 39.5 bits (88), Expect = 0.085
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +1
Query: 283 GWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQV 414
G++P A+ +VA + + +Y VATFY F +P G+ H+ V
Sbjct: 31 GYLPEDALEEVASFTGVSRAHLYGVATFYAQFRFKPRGRKHIMV 74
>UniRef50_Q9S5X7 Cluster: Fe-hydrogenase, subunit gamma; n=5;
Thermotogaceae|Rep: Fe-hydrogenase, subunit gamma -
Thermotoga maritima
Length = 164
Score = 39.1 bits (87), Expect = 0.11
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +1
Query: 286 WIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQV 414
++P ++ V+ + +P ++Y VATFY F +P GKY + V
Sbjct: 38 YLPEDVINYVSTAMGIPPAKIYGVATFYAQFSLKPKGKYTIMV 80
>UniRef50_Q057X2 Cluster: NADH dehydrogenase I chain E; n=1;
Buchnera aphidicola str. Cc (Cinara cedri)|Rep: NADH
dehydrogenase I chain E - Buchnera aphidicola subsp.
Cinara cedri
Length = 156
Score = 39.1 bits (87), Expect = 0.11
Identities = 18/57 (31%), Positives = 34/57 (59%)
Frame = +1
Query: 229 SQARCHDSLLDLAQRQSGGWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGK 399
SQA C ++L + + + WI ++ +++IL++P V +ATFY R+P+G+
Sbjct: 22 SQAACIEALKIVQEHRK--WICKDSIIAISKILSIPACEVESIATFYCHIFRKPVGR 76
>UniRef50_A3THI9 Cluster: ATP synthase subunit E; n=3;
Actinomycetales|Rep: ATP synthase subunit E - Janibacter
sp. HTCC2649
Length = 417
Score = 39.1 bits (87), Expect = 0.11
Identities = 29/81 (35%), Positives = 39/81 (48%)
Frame = +1
Query: 172 VLAGXSKESRGFVGHLP*RSQARCHDSLLDLAQRQSGGWIPISAMHKVAEILNLPKMRVY 351
VLAG ++ V P + A LL L Q G ++ + AE+L L + V
Sbjct: 27 VLAGLHADAELVVAKYPQKRSALL--PLLHLVQSVDG-YVTGRGIDFCAEVLELSRAEVS 83
Query: 352 EVATFYTMFIRRPIGKYHVQV 414
VATFYT + R P G+Y V V
Sbjct: 84 GVATFYTQYKRHPNGEYTVGV 104
>UniRef50_A1ALP3 Cluster: NADH-quinone oxidoreductase, E subunit;
n=1; Pelobacter propionicus DSM 2379|Rep: NADH-quinone
oxidoreductase, E subunit - Pelobacter propionicus
(strain DSM 2379)
Length = 154
Score = 39.1 bits (87), Expect = 0.11
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +1
Query: 313 VAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQV 414
+A L LP M+V E T+YTMF R P+G + ++V
Sbjct: 46 IANYLGLPAMQVKEALTWYTMFYRHPVGTHVIKV 79
>UniRef50_A5UZ48 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=10; Bacteria|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Roseiflexus sp. RS-1
Length = 178
Score = 38.7 bits (86), Expect = 0.15
Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 2/112 (1%)
Frame = +1
Query: 247 DSLLDLAQRQSG--GWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVLG 420
D+L+++ R G++ + +A L+LP RVY VATFY F P G+ H V+
Sbjct: 38 DALIEVLHRAQELFGYLSTDLLLFIANSLHLPPSRVYGVATFYHFFSLAPKGE-HSCVVC 96
Query: 421 LNPRGKXPYPCGFEALMPY*MQLNREPNCEVGGNSPCGKFSVSEX*NVLGAC 576
L G Y G A++ Q+ + G +P G+ S+ E LGAC
Sbjct: 97 L---GTACYVRGAAAILAAAEQM---LGIKAGHTTPDGRLSL-ETARCLGAC 141
>UniRef50_Q835I9 Cluster: NAD-dependent formate dehydrogenase, gamma
subunit, putative; n=1; Enterococcus faecalis|Rep:
NAD-dependent formate dehydrogenase, gamma subunit,
putative - Enterococcus faecalis (Streptococcus
faecalis)
Length = 162
Score = 38.3 bits (85), Expect = 0.20
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +1
Query: 253 LLDLAQRQSGGWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVLGLNP 429
L++L G+I VAE L+L + RVYE+ +FY + P KY +++ P
Sbjct: 27 LIELQFASEEGYIDQETAQLVAEHLHLTEARVYEIVSFYAILKTEPQAKYVLKICNSTP 85
>UniRef50_A7HII1 Cluster: NADH-quinone oxidoreductase, E subunit;
n=2; Anaeromyxobacter|Rep: NADH-quinone oxidoreductase,
E subunit - Anaeromyxobacter sp. Fw109-5
Length = 188
Score = 38.3 bits (85), Expect = 0.20
Identities = 32/102 (31%), Positives = 44/102 (43%)
Frame = +1
Query: 283 GWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVLGLNPRGKXPYPCGFE 462
G++ + A+ L R EVATFY MF RPIG++ V+V G +
Sbjct: 70 GYLTPAVQRLAADRLGTSPARAEEVATFYVMFNTRPIGRHLVEVC----TNVSCCLTGGD 125
Query: 463 ALMPY*MQLNREPNCEVGGNSPCGKFSVSEX*NVLGACVNPP 588
L Y L + GG S G+ ++ E LGAC P
Sbjct: 126 RLFEY---LKHKYGVTNGGTSQDGRVTLREV-ECLGACGTAP 163
>UniRef50_A0LLS9 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Syntrophobacter fumaroxidans MPOB|Rep:
NADH dehydrogenase (Ubiquinone), 24 kDa subunit -
Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB)
Length = 151
Score = 38.3 bits (85), Expect = 0.20
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 2/119 (1%)
Frame = +1
Query: 238 RCHDSLLDLAQRQSG--GWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQ 411
R D+L+ + Q G G++P AM A + VY V+TFY F P+G++ V
Sbjct: 14 RKRDALIPVLQDIQGEFGYLPPHAMQAAARHCRTSAVEVYGVSTFYAQFKFSPVGRHTVT 73
Query: 412 VLGLNPRGKXPYPCGFEALMPY*MQLNREPNCEVGGNSPCGKFSVSEX*NVLGACVNPP 588
V +G + G ++ + + + G +P G F++ E +GAC P
Sbjct: 74 VC----QGTACHVMGGHRILE---ECKSQLGVQPGQTTPDGMFTL-ETVACIGACALSP 124
>UniRef50_Q2LS97 Cluster: NADH-quinone oxidoreductase chain F; n=2;
Syntrophus aciditrophicus SB|Rep: NADH-quinone
oxidoreductase chain F - Syntrophus aciditrophicus
(strain SB)
Length = 638
Score = 37.9 bits (84), Expect = 0.26
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +1
Query: 226 RSQARCH--DSLLDLAQRQSGGWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGK 399
R +AR H L DL + ++ VAE +NLP+ V FYTMF RP K
Sbjct: 44 RGKAREHLMAILRDLENLSGNQQLSPETLNAVAEAMNLPQSTVAGFVGFYTMFSTRPRAK 103
Query: 400 YHVQVLGLNP 429
+ ++V P
Sbjct: 104 FLIRVCKSGP 113
>UniRef50_A5FS13 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=3; Dehalococcoides|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Dehalococcoides sp. BAV1
Length = 154
Score = 37.9 bits (84), Expect = 0.26
Identities = 23/70 (32%), Positives = 36/70 (51%)
Frame = +1
Query: 262 LAQRQSGGWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVLGLNPRGKX 441
LA +++ ++ M KVA + +P+ VY +ATFY+ F P G + V V RG
Sbjct: 28 LAFQRNFSYLSRDMMQKVAAYVGVPESSVYNIATFYSQFRLEPPGIHRVHVC----RGTA 83
Query: 442 PYPCGFEALM 471
+ G E L+
Sbjct: 84 CHVMGAERLL 93
>UniRef50_Q6FE68 Cluster: NADH dehydrogenase I chain E; n=5;
Moraxellaceae|Rep: NADH dehydrogenase I chain E -
Acinetobacter sp. (strain ADP1)
Length = 170
Score = 37.5 bits (83), Expect = 0.34
Identities = 19/54 (35%), Positives = 34/54 (62%)
Frame = +1
Query: 256 LDLAQRQSGGWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVL 417
L QR++G W+ + M+ +A++L++ + VATFY R+P+G+ HV +L
Sbjct: 44 LKCVQRRNG-WVDDAQMNAIAQMLSISVADLEGVATFYNRIYRQPVGR-HVILL 95
>UniRef50_Q4AHT8 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Chlorobium phaeobacteroides BS1|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa subunit - Chlorobium
phaeobacteroides BS1
Length = 172
Score = 37.5 bits (83), Expect = 0.34
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +1
Query: 283 GWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQV 414
G++P A K+ E + L +Y VATFY F P+GK+ ++V
Sbjct: 49 GYVPREAFIKLNEEMGLQLSDMYGVATFYAQFRLNPVGKHIIKV 92
>UniRef50_A0J5R7 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Shewanella woodyi ATCC 51908|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa subunit - Shewanella
woodyi ATCC 51908
Length = 179
Score = 37.5 bits (83), Expect = 0.34
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Frame = +1
Query: 187 SKESRGF---VGHLP*RSQARCHDSLLDLAQRQSGGWIPISAMHKVAEILNLPKMRVYEV 357
SKE +G + H P A L L Q + G W+ +++H ++ +P + V
Sbjct: 23 SKEQQGIDELISHSP--QLAGITIDALKLIQAERG-WVSDASLHALSLYTQIPVADLDSV 79
Query: 358 ATFYTMFIRRPIGK 399
ATFY + R+P+GK
Sbjct: 80 ATFYNLIFRQPVGK 93
>UniRef50_Q01WJ0 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=2; Bacteria|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Solibacter usitatus
(strain Ellin6076)
Length = 170
Score = 37.1 bits (82), Expect = 0.45
Identities = 32/116 (27%), Positives = 49/116 (42%)
Frame = +1
Query: 283 GWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVLGLNPRGKXPYPCGFE 462
G++ + + VA +L +P RVY ATFY F +P G++ V G Y G
Sbjct: 46 GYLDEAGLRFVASVLRVPLSRVYGAATFYHFFTLKPKGRHTCVVC----TGTACYIKGAP 101
Query: 463 ALMPY*MQLNREPNCEVGGNSPCGKFSVSEX*NVLGACVNPPIGYKSMMALLMEGP 630
AL+ + ++ + G + G+ SV LG+C P L GP
Sbjct: 102 ALLG---AIEKQYGIKPGETTADGELSVLTA-RCLGSCGLAPAAVMDQAVLGKIGP 153
>UniRef50_A5FSK9 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=3; Dehalococcoides|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Dehalococcoides sp. BAV1
Length = 155
Score = 37.1 bits (82), Expect = 0.45
Identities = 16/55 (29%), Positives = 32/55 (58%)
Frame = +1
Query: 265 AQRQSGGWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVLGLNP 429
A ++ G+IP A++ + E L++P + +Y + TFY++ GKY +++ P
Sbjct: 29 AVQEECGYIPHEAVNYLRECLSIPSIDIYGMITFYSLLSTNQKGKYVIRLCNSLP 83
>UniRef50_O66842 Cluster: NADH-quinone oxidoreductase subunit E;
n=2; Aquifex aeolicus|Rep: NADH-quinone oxidoreductase
subunit E - Aquifex aeolicus
Length = 160
Score = 37.1 bits (82), Expect = 0.45
Identities = 29/103 (28%), Positives = 41/103 (39%)
Frame = +1
Query: 283 GWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVLGLNPRGKXPYPCGFE 462
G+IP ++ +A++L LP V V FY MF R KY ++V C
Sbjct: 42 GYIPPESLKPLADMLELPLNHVEGVVAFYDMFDREDKAKYRIRVC-------VSIVCHLM 94
Query: 463 ALMPY*MQLNREPNCEVGGNSPCGKFSVSEX*NVLGACVNPPI 591
L + G +P GKF + LGAC P+
Sbjct: 95 GTNKLLKALENILGIKPGEVTPDGKFKIVPV-QCLGACSEAPV 136
>UniRef50_Q89QJ0 Cluster: NADH dehydrogenase I chain E; n=16;
Alphaproteobacteria|Rep: NADH dehydrogenase I chain E -
Bradyrhizobium japonicum
Length = 162
Score = 36.7 bits (81), Expect = 0.60
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = +1
Query: 283 GWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKY 402
G++P +A+ VA+ LNL + V+ V TFY F +P G++
Sbjct: 43 GYVPEAAIPMVAQALNLSRAEVHGVFTFYHDFRHKPAGRH 82
>UniRef50_Q6N1Z1 Cluster: NADH-ubiquinone dehydrogenase chain E;
n=8; Alphaproteobacteria|Rep: NADH-ubiquinone
dehydrogenase chain E - Rhodopseudomonas palustris
Length = 162
Score = 36.7 bits (81), Expect = 0.60
Identities = 25/107 (23%), Positives = 49/107 (45%)
Frame = +1
Query: 271 RQSGGWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVLGLNPRGKXPYP 450
+++ GW+ + + + A++L + + +ATFY+ R P+G + + G Y
Sbjct: 33 QEAEGWVSDAHLKEAADVLGVTPAEIDALATFYSQIFRSPVGDTVILLCD----GLSCYL 88
Query: 451 CGFEALMPY*MQLNREPNCEVGGNSPCGKFSVSEX*NVLGACVNPPI 591
CG +A+ M + G +P GKF++ +G C P+
Sbjct: 89 CGGDAVRDAVMS---KLGIGFGETTPDGKFTLINI-CCVGGCDRAPV 131
>UniRef50_Q3A640 Cluster: NADH:ubiquinone oxidoreductase 24 kD
subunit; n=1; Pelobacter carbinolicus DSM 2380|Rep:
NADH:ubiquinone oxidoreductase 24 kD subunit -
Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1)
Length = 159
Score = 36.7 bits (81), Expect = 0.60
Identities = 25/103 (24%), Positives = 49/103 (47%)
Frame = +1
Query: 283 GWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVLGLNPRGKXPYPCGFE 462
G++P+S ++E ++ R+Y V TFY+ F ++ VQ+ G Y G +
Sbjct: 41 GYLPLSIQEYISEKTHISPNRIYGVVTFYSFFTMEARARHRVQLC----LGTACYVKGAD 96
Query: 463 ALMPY*MQLNREPNCEVGGNSPCGKFSVSEX*NVLGACVNPPI 591
A++ ++ + G ++ G+F+ E +GAC P+
Sbjct: 97 AMVE---KIENDYQINFGESTEDGRFTF-EKARCVGACGLAPV 135
>UniRef50_Q1IS36 Cluster: NADH-quinone oxidoreductase, E subunit;
n=1; Acidobacteria bacterium Ellin345|Rep: NADH-quinone
oxidoreductase, E subunit - Acidobacteria bacterium
(strain Ellin345)
Length = 160
Score = 36.7 bits (81), Expect = 0.60
Identities = 16/44 (36%), Positives = 28/44 (63%)
Frame = +1
Query: 283 GWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQV 414
G++ A+ ++A + L + V V ++Y+M +PIGKY+VQV
Sbjct: 37 GYLSDEAIVEIANRVELTPLEVRNVISYYSMLRTKPIGKYNVQV 80
>UniRef50_Q9ZBV8 Cluster: Putative respiratory chain oxidoreductase;
n=2; Streptomyces|Rep: Putative respiratory chain
oxidoreductase - Streptomyces coelicolor
Length = 646
Score = 36.3 bits (80), Expect = 0.79
Identities = 17/36 (47%), Positives = 19/36 (52%)
Frame = +1
Query: 283 GWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRP 390
GWI A+ V L +P Y VATFY MF RP
Sbjct: 50 GWISEGALDYVCRRLTVPPAEAYGVATFYAMFSVRP 85
>UniRef50_Q2FP98 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Methanospirillum hungatei JF-1|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa subunit -
Methanospirillum hungatei (strain JF-1 / DSM 864)
Length = 160
Score = 36.3 bits (80), Expect = 0.79
Identities = 14/42 (33%), Positives = 27/42 (64%)
Frame = +1
Query: 289 IPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQV 414
IP+ + V+E L+LP ++ + TFY+ F +P+G++ + V
Sbjct: 34 IPMDTLKLVSEKLDLPLSELFALVTFYSFFSLKPVGEHLITV 75
>UniRef50_Q9RU91 Cluster: NADH dehydrogenase I, E subunit; n=2;
Deinococcus|Rep: NADH dehydrogenase I, E subunit -
Deinococcus radiodurans
Length = 207
Score = 35.9 bits (79), Expect = 1.0
Identities = 27/103 (26%), Positives = 47/103 (45%)
Frame = +1
Query: 283 GWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVLGLNPRGKXPYPCGFE 462
G++ + ++AE+ V V +FY+ + P G+YH+QV G +
Sbjct: 41 GFVAAPRLAEIAELCGTTATEVRSVMSFYSTYHTVPTGRYHLQVCSTLMCAL----AGSD 96
Query: 463 ALMPY*MQLNREPNCEVGGNSPCGKFSVSEX*NVLGACVNPPI 591
AL +L + + G +P G+FSV + LG+C P+
Sbjct: 97 ALWD---ELVTRLDVQPGEVTPDGRFSVQKV-ECLGSCGTAPV 135
>UniRef50_Q2AG84 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=5; Bacteria|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Halothermothrix orenii H
168
Length = 167
Score = 35.9 bits (79), Expect = 1.0
Identities = 27/102 (26%), Positives = 42/102 (41%)
Frame = +1
Query: 286 WIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVLGLNPRGKXPYPCGFEA 465
++P + +A +++L VY VATFY F P GKY + V C
Sbjct: 41 YLPEEILTYIATVMDLSPATVYGVATFYAQFSLDPKGKYVINVC-------DGTACHVSG 93
Query: 466 LMPY*MQLNREPNCEVGGNSPCGKFSVSEX*NVLGACVNPPI 591
+P + ++ N E G + E + LGAC P+
Sbjct: 94 SLPVLNAIRKKLNLEDGKFTTDDLMFTVETVSCLGACGLAPV 135
>UniRef50_A6PPY8 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Victivallis vadensis ATCC BAA-548|Rep:
NADH dehydrogenase (Ubiquinone), 24 kDa subunit -
Victivallis vadensis ATCC BAA-548
Length = 170
Score = 35.9 bits (79), Expect = 1.0
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +1
Query: 313 VAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQV 414
VA + +P RVY VATFY F +P GKY +++
Sbjct: 54 VATSIGVPPSRVYGVATFYAHFSMQPKGKYIIKL 87
>UniRef50_A3YBB2 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Marinomonas sp. MED121|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa subunit - Marinomonas
sp. MED121
Length = 189
Score = 35.9 bits (79), Expect = 1.0
Identities = 14/44 (31%), Positives = 28/44 (63%)
Frame = +1
Query: 283 GWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQV 414
G++P S++ + + LN+ + V+ V TFY F +P G++ ++V
Sbjct: 57 GYVPDSSLPIIGKALNISRAEVHGVVTFYHHFSSKPRGRHIIEV 100
>UniRef50_A1AP34 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit precursor; n=2; Bacteria|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit precursor - Pelobacter
propionicus (strain DSM 2379)
Length = 169
Score = 35.9 bits (79), Expect = 1.0
Identities = 14/43 (32%), Positives = 26/43 (60%)
Frame = +1
Query: 286 WIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQV 414
++P+ + V E L++P +V+ V +FY F P GKY +++
Sbjct: 45 YLPMEVLSHVIEELDIPATKVFGVVSFYAHFTLEPRGKYVIRL 87
>UniRef50_Q1PW48 Cluster: Similar to NADH:ubiquinone oxidoreductase
24 kDa subunit, mitochondrial; n=1; Candidatus Kuenenia
stuttgartiensis|Rep: Similar to NADH:ubiquinone
oxidoreductase 24 kDa subunit, mitochondrial -
Candidatus Kuenenia stuttgartiensis
Length = 152
Score = 35.5 bits (78), Expect = 1.4
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +1
Query: 283 GWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQV 414
G++P+ + +V E + K +Y VATFY F P G+ ++V
Sbjct: 32 GYLPLDVLDQVCEESEITKSHLYGVATFYAQFKLTPKGRNAIKV 75
>UniRef50_A4J9N9 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=11; Bacteria|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Desulfotomaculum reducens
MI-1
Length = 177
Score = 35.5 bits (78), Expect = 1.4
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +1
Query: 283 GWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQV 414
G++P +A L +P VY V +FY+ F +P GK+ + V
Sbjct: 51 GYLPRDVQLFIARKLGIPGAEVYGVVSFYSYFTTKPSGKHTISV 94
>UniRef50_Q98BW7 Cluster: NAD-dependent formate dehydrogenase gamma
subunit; n=15; Proteobacteria|Rep: NAD-dependent formate
dehydrogenase gamma subunit - Rhizobium loti
(Mesorhizobium loti)
Length = 159
Score = 35.1 bits (77), Expect = 1.8
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = +1
Query: 283 GWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKY 402
G +P +A+ +A+ LNL + V+ V TFY F RP G++
Sbjct: 40 GHVPQAALPVIADGLNLSRAEVHGVVTFYHDFRARPAGRH 79
>UniRef50_Q74GA4 Cluster: NADH dehydrogenase I, E subunit; n=6;
Geobacter|Rep: NADH dehydrogenase I, E subunit -
Geobacter sulfurreducens
Length = 173
Score = 35.1 bits (77), Expect = 1.8
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +1
Query: 283 GWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQV 414
G++P + VAE LN+ +++ V TFY F +P G++ ++V
Sbjct: 50 GYVPRPTIDLVAERLNVYPSQIFGVLTFYAQFHLKPRGRFIIRV 93
>UniRef50_Q47HE6 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit:Respiratory-chain NADH dehydrogenase domain, 51
kDa subunit; n=1; Dechloromonas aromatica RCB|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa
subunit:Respiratory-chain NADH dehydrogenase domain, 51
kDa subunit - Dechloromonas aromatica (strain RCB)
Length = 632
Score = 35.1 bits (77), Expect = 1.8
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 286 WIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHV 408
WI A+ ++ L +P+ ++ VA FY F P GKY V
Sbjct: 42 WISPEAIDRMQVTLGVPRTKIEGVAGFYAFFYTEPRGKYRV 82
>UniRef50_Q2C5T5 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=2; Vibrionaceae|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Photobacterium sp. SKA34
Length = 188
Score = 35.1 bits (77), Expect = 1.8
Identities = 15/44 (34%), Positives = 30/44 (68%)
Frame = +1
Query: 283 GWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQV 414
G+I +++ V+E+ +L ++ E+ TFYT+ RRP+G+ ++V
Sbjct: 36 GYITKPSLNLVSELTDLSTTQLDELITFYTLLRRRPVGRNIMRV 79
>UniRef50_Q8YYU5 Cluster: NADH dehydrogenase I chain E; n=4;
Bacteria|Rep: NADH dehydrogenase I chain E - Anabaena
sp. (strain PCC 7120)
Length = 164
Score = 34.7 bits (76), Expect = 2.4
Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 2/112 (1%)
Frame = +1
Query: 247 DSLLDLAQRQSG--GWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVLG 420
D+L+++ + G++ + +A L LP RVY VATFY +F P G + V
Sbjct: 32 DALIEILHKAQELFGYLENDLLLYIAHSLKLPPSRVYGVATFYHLFSLAPQGVHSCVVC- 90
Query: 421 LNPRGKXPYPCGFEALMPY*MQLNREPNCEVGGNSPCGKFSVSEX*NVLGAC 576
G Y G A++ L + G + G+ S+ LGAC
Sbjct: 91 ---TGTACYVKGSSAIL---ADLEKATRIHAGETTADGQLSLLTA-RCLGAC 135
>UniRef50_Q1PWG7 Cluster: Similar to to proton-translocating NADH
dehydrogenase I, 24 kDa subunit; n=1; Candidatus
Kuenenia stuttgartiensis|Rep: Similar to to
proton-translocating NADH dehydrogenase I, 24 kDa
subunit - Candidatus Kuenenia stuttgartiensis
Length = 164
Score = 34.3 bits (75), Expect = 3.2
Identities = 27/103 (26%), Positives = 49/103 (47%)
Frame = +1
Query: 283 GWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVLGLNPRGKXPYPCGFE 462
G++P + V+E LN+ + VATFY F RP G++ ++ G + G +
Sbjct: 45 GYLPEKVVDFVSERLNISVNEIIGVATFYAQFHMRPRGRHIIKACS----GTACHVKGAK 100
Query: 463 ALMPY*MQLNREPNCEVGGNSPCGKFSVSEX*NVLGACVNPPI 591
++ +L ++ + VG + F++ E LGAC P+
Sbjct: 101 QIIE---KLGKKLDIPVGETTKDTMFTLEEV-ACLGACSLAPV 139
>UniRef50_A6F4P8 Cluster: Putative uncharacterized protein; n=1;
Marinobacter algicola DG893|Rep: Putative
uncharacterized protein - Marinobacter algicola DG893
Length = 1036
Score = 34.3 bits (75), Expect = 3.2
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +2
Query: 77 SSKSIQTTASRQHDSLFVHRDTPEDNPSIP 166
S++SI + ASR H +LFV+RD PE +P
Sbjct: 389 STESITSGASRDHKTLFVYRDAPEKLVRVP 418
>UniRef50_Q4AMU5 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Chlorobium phaeobacteroides BS1|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa subunit - Chlorobium
phaeobacteroides BS1
Length = 195
Score = 33.9 bits (74), Expect = 4.2
Identities = 17/54 (31%), Positives = 31/54 (57%)
Frame = +1
Query: 253 LLDLAQRQSGGWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQV 414
LL Q + G ++P AM + ++ ++Y VATFY+ F P+G++ ++V
Sbjct: 32 LLQAVQNEYG-YLPREAMDIIVAETDVGASQLYGVATFYSQFRLDPVGRHVIKV 84
>UniRef50_Q0LHA0 Cluster: Peptidase S9, prolyl oligopeptidase active
site region; n=1; Herpetosiphon aurantiacus ATCC
23779|Rep: Peptidase S9, prolyl oligopeptidase active
site region - Herpetosiphon aurantiacus ATCC 23779
Length = 682
Score = 33.9 bits (74), Expect = 4.2
Identities = 18/45 (40%), Positives = 29/45 (64%)
Frame = +2
Query: 62 GLWRMSSKSIQTTASRQHDSLFVHRDTPEDNPSIPFEFSQAXQKR 196
G++ +++++ +T A R D +H TPEDNPSI +SQ+ KR
Sbjct: 320 GIYCLATRAARTRAYRYSDGA-MHELTPEDNPSIS-GYSQSLNKR 362
>UniRef50_A1HP41 Cluster: NADH-quinone oxidoreductase, E subunit;
n=9; Bacteria|Rep: NADH-quinone oxidoreductase, E
subunit - Thermosinus carboxydivorans Nor1
Length = 166
Score = 33.9 bits (74), Expect = 4.2
Identities = 27/103 (26%), Positives = 48/103 (46%)
Frame = +1
Query: 283 GWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVLGLNPRGKXPYPCGFE 462
G++ + +AE L++P ++Y V TFY F P G+ ++V +G + G +
Sbjct: 48 GYLSKEVIEYIAEKLDIPVSQIYGVVTFYAQFHLNPRGRNIIRVC----QGTACHVRGAK 103
Query: 463 ALMPY*MQLNREPNCEVGGNSPCGKFSVSEX*NVLGACVNPPI 591
A++ L GG + KF++ E +GAC P+
Sbjct: 104 AIL---KALEDNLKITAGGTTADLKFTL-ETVACIGACGLAPV 142
>UniRef50_A0QNT7 Cluster: Formate dehydrogenase, gamma subunit; n=1;
Mycobacterium smegmatis str. MC2 155|Rep: Formate
dehydrogenase, gamma subunit - Mycobacterium smegmatis
(strain ATCC 700084 / mc(2)155)
Length = 161
Score = 33.9 bits (74), Expect = 4.2
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +1
Query: 283 GWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQV 414
G +P A+ +AE LNL + V+ V TFY F P G+ V+V
Sbjct: 41 GCVPAEAVPVLAEELNLSRADVHGVITFYHDFRSEPAGRTTVRV 84
>UniRef50_Q3A461 Cluster: NADP-reducing hydrogenase chain A; n=5;
Deltaproteobacteria|Rep: NADP-reducing hydrogenase chain
A - Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1)
Length = 173
Score = 33.5 bits (73), Expect = 5.6
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +1
Query: 283 GWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQV 414
G++P VA+ + + +VY V +FYT F P GK+ + V
Sbjct: 55 GYLPKEVQEFVADHMEVSLAQVYGVVSFYTFFTMIPKGKHPISV 98
>UniRef50_A3DCI7 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=5; Clostridium|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Clostridium thermocellum
(strain ATCC 27405 / DSM 1237)
Length = 165
Score = 33.5 bits (73), Expect = 5.6
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +1
Query: 286 WIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQV 414
+IP +++ L + + R++ VATFY F P GKY ++V
Sbjct: 41 YIPKEVFPYLSKKLKVSEARIFSVATFYENFSLEPKGKYIIKV 83
>UniRef50_A7PC77 Cluster: Chromosome chr2 scaffold_11, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr2 scaffold_11, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 65
Score = 33.5 bits (73), Expect = 5.6
Identities = 17/56 (30%), Positives = 37/56 (66%)
Frame = +2
Query: 32 MLSSLRTGVQGLWRMSSKSIQTTASRQHDSLFVHRDTPEDNPSIPFEFSQAXQKRV 199
ML+ L T + ++R + ++ ++ ++ +L H D+ ++NPSIP+EF+ A +++V
Sbjct: 1 MLARLATEARQIFRQNPQTSRSFST----ALNYHLDSLDNNPSIPWEFNDANKEKV 52
>UniRef50_Q2Z141 Cluster: Putative ATP-dependent DNA helicase; n=1;
Pseudomonas phage EL|Rep: Putative ATP-dependent DNA
helicase - Pseudomonas phage EL
Length = 760
Score = 33.5 bits (73), Expect = 5.6
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Frame = +2
Query: 74 MSSKSIQTTASRQHDSLFVHRDTPEDNPSIPFEFSQ---AXQKRVEALLAIYPE 226
++++S+QT +++ D +F+ PED P PF Q + Q+R+E L + E
Sbjct: 223 VNTRSVQTLLAKEPDGVFIPLCEPEDGPEKPFVTDQLEGSRQQRLEHLRRLMDE 276
>UniRef50_Q54GJ1 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 838
Score = 33.1 bits (72), Expect = 7.4
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -1
Query: 616 VRPSLTCNQWGGSHKLPKHFXLLKRKTFHKDCCLQPHSLVP 494
++ SL C +WG S +P HF K +F K L + L+P
Sbjct: 35 IKLSLVCKKWG-SQIVPYHFCFFKHSSFEKILQLATNPLIP 74
>UniRef50_UPI00003C0AF2 Cluster: PREDICTED: similar to Bone
morphogenetic protein 10 precursor (BMP-10); n=1; Apis
mellifera|Rep: PREDICTED: similar to Bone morphogenetic
protein 10 precursor (BMP-10) - Apis mellifera
Length = 339
Score = 32.7 bits (71), Expect = 9.7
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = +2
Query: 56 VQGLWRMSSKSIQTTASRQHDSLFVHRDTPEDNPSIPFEFSQAXQKR 196
V GLW+ SS+S QT S+ P +PS+ FS KR
Sbjct: 17 VYGLWKTSSRSWQTPRVHAKASIQFDLSIPASSPSVLHRFSNRTSKR 63
>UniRef50_Q6SGN4 Cluster: NADH-quinone oxidoreductase, E subunit;
n=1; uncultured bacterium 463|Rep: NADH-quinone
oxidoreductase, E subunit - uncultured bacterium 463
Length = 167
Score = 32.7 bits (71), Expect = 9.7
Identities = 17/63 (26%), Positives = 30/63 (47%)
Frame = +1
Query: 208 VGHLP*RSQARCHDSLLDLAQRQSGGWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRR 387
+ H+P R + A R GW+ ++ +A L++ + +ATFY + RR
Sbjct: 25 IAHVPYRDAVAIDALKIVQAHR---GWVSDESLSAIAAHLHMSADELDGIATFYNLIYRR 81
Query: 388 PIG 396
P+G
Sbjct: 82 PVG 84
>UniRef50_A0LGJ1 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=2; Bacteria|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Syntrophobacter
fumaroxidans (strain DSM 10017 / MPOB)
Length = 162
Score = 32.7 bits (71), Expect = 9.7
Identities = 22/65 (33%), Positives = 30/65 (46%)
Frame = +1
Query: 220 P*RSQARCHDSLLDLAQRQSGGWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGK 399
P R Q +L AQ G ++P +VAE L L +Y V TFY F P G+
Sbjct: 23 PYRGQPNSLIQVLAKAQEYIG-YLPKWVQVQVAEGLGLSLQEIYGVTTFYAFFSLIPRGR 81
Query: 400 YHVQV 414
+ + V
Sbjct: 82 HKLSV 86
>UniRef50_A7S5S7 Cluster: Predicted protein; n=2; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 591
Score = 32.7 bits (71), Expect = 9.7
Identities = 19/76 (25%), Positives = 38/76 (50%)
Frame = +2
Query: 26 KKMLSSLRTGVQGLWRMSSKSIQTTASRQHDSLFVHRDTPEDNPSIPFEFSQAXQKRVEA 205
+++L SL+ ++ L+ +S+ + + Q L +D P++ PS + ++A
Sbjct: 218 RRLLLSLKQSLEMLYEDTSEHSSSESRVQLGELLSLKDVPDEEPSRTMTLATRCAAMLDA 277
Query: 206 LLAIYPEGHKRGAMIP 253
L A+ G R A+IP
Sbjct: 278 LTAMTRTGISRFAVIP 293
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 844,471,146
Number of Sequences: 1657284
Number of extensions: 18267707
Number of successful extensions: 37759
Number of sequences better than 10.0: 130
Number of HSP's better than 10.0 without gapping: 36512
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37736
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60500186565
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -