Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30155
         (742 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146747-1|AAO12062.1|  288|Anopheles gambiae odorant-binding pr...    25   2.5  
AJ618931-1|CAF02009.1|  288|Anopheles gambiae odorant-binding pr...    25   2.5  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    24   5.7  
U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    24   5.7  

>AY146747-1|AAO12062.1|  288|Anopheles gambiae odorant-binding
           protein AgamOBP42 protein.
          Length = 288

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1

Query: 295 ISAMHKVAEILNLPKMRVYE 354
           + A H+    LNLPK R+Y+
Sbjct: 34  VQAQHECVTYLNLPKHRLYQ 53


>AJ618931-1|CAF02009.1|  288|Anopheles gambiae odorant-binding
           protein OBPjj83d protein.
          Length = 288

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1

Query: 295 ISAMHKVAEILNLPKMRVYE 354
           + A H+    LNLPK R+Y+
Sbjct: 34  VQAQHECVTYLNLPKHRLYQ 53


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 10/45 (22%), Positives = 19/45 (42%)
 Frame = +1

Query: 586 PIGYKSMMALLMEGPVCRRFQRKFSANFKEGRETQTWAQKWKIPV 720
           P G  S +    +  V     + F+A+   G   + W + W +P+
Sbjct: 561 PDGIPSTVLKRCQTTVAPILAKLFNASLANGYFPKAWRKSWMVPI 605


>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -1

Query: 538 TFHKDCCLQPHSLVPCLIA 482
           TFH+ CC  P  L+  +++
Sbjct: 38  TFHRGCCKLPPELIDAVLS 56


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 884,124
Number of Sequences: 2352
Number of extensions: 19770
Number of successful extensions: 30
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76091949
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)