Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30155
(742 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR456928-1|CAG33209.1| 249|Homo sapiens NDUFV2 protein. 99 8e-21
M22538-1|AAA75390.1| 249|Homo sapiens NADH-ubiquinone reductase... 100 1e-20
BC071689-1|AAH71689.1| 249|Homo sapiens NADH dehydrogenase (ubi... 100 1e-20
BC017487-1|AAH17487.1| 249|Homo sapiens NADH dehydrogenase (ubi... 100 1e-20
BC001632-1|AAH01632.1| 249|Homo sapiens NADH dehydrogenase (ubi... 100 1e-20
D88548-1|BAA25988.1| 231|Homo sapiens 24-kDa subunit of complex... 97 6e-20
BC132760-1|AAI32761.1| 194|Homo sapiens hypothetical protein LO... 33 1.4
AK125766-1|BAC86279.1| 194|Homo sapiens protein ( Homo sapiens ... 32 1.9
>CR456928-1|CAG33209.1| 249|Homo sapiens NDUFV2 protein.
Length = 249
Score = 99 bits (238), Expect = 8e-21
Identities = 58/134 (43%), Positives = 79/134 (58%)
Frame = +1
Query: 190 KESRGFVGHLP*RSQARCHDSLLDLAQRQSGGWIPISAMHKVAEILNLPKMRVYEVATFY 369
K V + P +A +LDLAQRQ+G W+PISAM+KVAE+L +P MRVYEVATFY
Sbjct: 61 KRIEAIVKNYPEGHKAAAVLPVLDLAQRQNG-WLPISAMNKVAEVLQVPPMRVYEVATFY 119
Query: 370 TMFIRRPIGKYHVQVLGLNPRGKXPYPCGFEALMPY*MQLNREPNCEVGGNSPCGKFSVS 549
TM+ R+P+GKYH+QV PC + ++ +VG ++P F++
Sbjct: 120 TMYNRKPVGKYHIQVCTTT-------PCMLRNSDSILEAIQKKLGIKVGESTPDKLFTLI 172
Query: 550 EX*NVLGACVNPPI 591
E LGACVN P+
Sbjct: 173 EV-ECLGACVNAPM 185
Score = 68.5 bits (160), Expect = 2e-11
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Frame = +2
Query: 35 LSSLRTGVQGLWRMSSKSIQTTASRQH--DSLFVHRDTPEDNPSIPFEFSQAXQKRVEAL 208
L + G+ W +++ TA + +LFVHRDTPE+NP PF+F+ KR+EA+
Sbjct: 7 LRARAAGLTAHWGRHVRNLHKTAMQNGAGGALFVHRDTPENNPDTPFDFTPENYKRIEAI 66
Query: 209 LAIYPEGHKRGAMIP 253
+ YPEGHK A++P
Sbjct: 67 VKNYPEGHKAAAVLP 81
>M22538-1|AAA75390.1| 249|Homo sapiens NADH-ubiquinone reductase
protein.
Length = 249
Score = 99.5 bits (237), Expect = 1e-20
Identities = 58/134 (43%), Positives = 78/134 (58%)
Frame = +1
Query: 190 KESRGFVGHLP*RSQARCHDSLLDLAQRQSGGWIPISAMHKVAEILNLPKMRVYEVATFY 369
K V + P +A +LDLAQRQ+G W+PISAM+KVAE+L +P MRVYEVATFY
Sbjct: 61 KRIEAIVKNYPEGHKAAAVLPVLDLAQRQNG-WLPISAMNKVAEVLQVPPMRVYEVATFY 119
Query: 370 TMFIRRPIGKYHVQVLGLNPRGKXPYPCGFEALMPY*MQLNREPNCEVGGNSPCGKFSVS 549
TM+ R+P+GKYH+QV PC + ++ +VG +P F++
Sbjct: 120 TMYNRKPVGKYHIQVCTTT-------PCMLRNSDSILEAIQKKLGIKVGETTPDKLFTLI 172
Query: 550 EX*NVLGACVNPPI 591
E LGACVN P+
Sbjct: 173 EV-ECLGACVNAPM 185
Score = 68.5 bits (160), Expect = 2e-11
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Frame = +2
Query: 35 LSSLRTGVQGLWRMSSKSIQTTASRQH--DSLFVHRDTPEDNPSIPFEFSQAXQKRVEAL 208
L + G+ W +++ TA + +LFVHRDTPE+NP PF+F+ KR+EA+
Sbjct: 7 LRARAAGLTAHWGRHVRNLHKTAMQNGAGGALFVHRDTPENNPDTPFDFTPENYKRIEAI 66
Query: 209 LAIYPEGHKRGAMIP 253
+ YPEGHK A++P
Sbjct: 67 VKNYPEGHKAAAVLP 81
>BC071689-1|AAH71689.1| 249|Homo sapiens NADH dehydrogenase
(ubiquinone) flavoprotein 2, 24kDa protein.
Length = 249
Score = 99.5 bits (237), Expect = 1e-20
Identities = 58/134 (43%), Positives = 78/134 (58%)
Frame = +1
Query: 190 KESRGFVGHLP*RSQARCHDSLLDLAQRQSGGWIPISAMHKVAEILNLPKMRVYEVATFY 369
K V + P +A +LDLAQRQ+G W+PISAM+KVAE+L +P MRVYEVATFY
Sbjct: 61 KRIEAIVKNYPEGHKAAAVLPVLDLAQRQNG-WLPISAMNKVAEVLQVPPMRVYEVATFY 119
Query: 370 TMFIRRPIGKYHVQVLGLNPRGKXPYPCGFEALMPY*MQLNREPNCEVGGNSPCGKFSVS 549
TM+ R+P+GKYH+QV PC + ++ +VG +P F++
Sbjct: 120 TMYNRKPVGKYHIQVCTTT-------PCMLRNSDSILEAIQKKLGIKVGETTPDKLFTLI 172
Query: 550 EX*NVLGACVNPPI 591
E LGACVN P+
Sbjct: 173 EV-ECLGACVNAPM 185
Score = 68.5 bits (160), Expect = 2e-11
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Frame = +2
Query: 35 LSSLRTGVQGLWRMSSKSIQTTASRQH--DSLFVHRDTPEDNPSIPFEFSQAXQKRVEAL 208
L + G+ W +++ TA + +LFVHRDTPE+NP PF+F+ KR+EA+
Sbjct: 7 LRARAAGLTAHWGRHVRNLHKTAMQNGAGGALFVHRDTPENNPDTPFDFTPENYKRIEAI 66
Query: 209 LAIYPEGHKRGAMIP 253
+ YPEGHK A++P
Sbjct: 67 VKNYPEGHKAAAVLP 81
>BC017487-1|AAH17487.1| 249|Homo sapiens NADH dehydrogenase
(ubiquinone) flavoprotein 2, 24kDa protein.
Length = 249
Score = 99.5 bits (237), Expect = 1e-20
Identities = 58/134 (43%), Positives = 78/134 (58%)
Frame = +1
Query: 190 KESRGFVGHLP*RSQARCHDSLLDLAQRQSGGWIPISAMHKVAEILNLPKMRVYEVATFY 369
K V + P +A +LDLAQRQ+G W+PISAM+KVAE+L +P MRVYEVATFY
Sbjct: 61 KRIEAIVKNYPEGHKAAAVLPVLDLAQRQNG-WLPISAMNKVAEVLQVPPMRVYEVATFY 119
Query: 370 TMFIRRPIGKYHVQVLGLNPRGKXPYPCGFEALMPY*MQLNREPNCEVGGNSPCGKFSVS 549
TM+ R+P+GKYH+QV PC + ++ +VG +P F++
Sbjct: 120 TMYNRKPVGKYHIQVCTTT-------PCMLRNSDSILEAIQKKLGIKVGETTPDKLFTLI 172
Query: 550 EX*NVLGACVNPPI 591
E LGACVN P+
Sbjct: 173 EV-ECLGACVNAPM 185
Score = 66.9 bits (156), Expect = 7e-11
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Frame = +2
Query: 35 LSSLRTGVQGLWRMSSKSIQTTASRQH--DSLFVHRDTPEDNPSIPFEFSQAXQKRVEAL 208
L + G+ W +++ T + +LFVHRDTPE+NP PF+F+ KR+EA+
Sbjct: 7 LRARAAGLTAHWGRHVRNLHKTVMQNGAGGALFVHRDTPENNPDTPFDFTPENYKRIEAI 66
Query: 209 LAIYPEGHKRGAMIP 253
+ YPEGHK A++P
Sbjct: 67 VKNYPEGHKAAAVLP 81
>BC001632-1|AAH01632.1| 249|Homo sapiens NADH dehydrogenase
(ubiquinone) flavoprotein 2, 24kDa protein.
Length = 249
Score = 99.5 bits (237), Expect = 1e-20
Identities = 58/134 (43%), Positives = 78/134 (58%)
Frame = +1
Query: 190 KESRGFVGHLP*RSQARCHDSLLDLAQRQSGGWIPISAMHKVAEILNLPKMRVYEVATFY 369
K V + P +A +LDLAQRQ+G W+PISAM+KVAE+L +P MRVYEVATFY
Sbjct: 61 KRIEAIVKNYPEGHKAAAVLPVLDLAQRQNG-WLPISAMNKVAEVLQVPPMRVYEVATFY 119
Query: 370 TMFIRRPIGKYHVQVLGLNPRGKXPYPCGFEALMPY*MQLNREPNCEVGGNSPCGKFSVS 549
TM+ R+P+GKYH+QV PC + ++ +VG +P F++
Sbjct: 120 TMYNRKPVGKYHIQVCTTT-------PCMLRNSDSILEAIQKKLGIKVGETTPDKLFTLI 172
Query: 550 EX*NVLGACVNPPI 591
E LGACVN P+
Sbjct: 173 EV-ECLGACVNAPM 185
Score = 66.9 bits (156), Expect = 7e-11
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Frame = +2
Query: 35 LSSLRTGVQGLWRMSSKSIQTTASRQH--DSLFVHRDTPEDNPSIPFEFSQAXQKRVEAL 208
L + G+ W +++ T + +LFVHRDTPE+NP PF+F+ KR+EA+
Sbjct: 7 LRARAAGLTAHWGRHVRNLHKTVMQNGAGGALFVHRDTPENNPDTPFDFTPENYKRIEAI 66
Query: 209 LAIYPEGHKRGAMIP 253
+ YPEGHK A++P
Sbjct: 67 VKNYPEGHKAAAVLP 81
>D88548-1|BAA25988.1| 231|Homo sapiens 24-kDa subunit of complex I
protein.
Length = 231
Score = 97.1 bits (231), Expect = 6e-20
Identities = 57/134 (42%), Positives = 78/134 (58%)
Frame = +1
Query: 190 KESRGFVGHLP*RSQARCHDSLLDLAQRQSGGWIPISAMHKVAEILNLPKMRVYEVATFY 369
K V + P +A +LDLAQRQ+G W+PISAM+KVAE+L +P MRVYEVATFY
Sbjct: 43 KRIEAIVKNYPEGHKAAAVLPVLDLAQRQNG-WLPISAMNKVAEVLQVPPMRVYEVATFY 101
Query: 370 TMFIRRPIGKYHVQVLGLNPRGKXPYPCGFEALMPY*MQLNREPNCEVGGNSPCGKFSVS 549
TM+ R+P+GKY++QV PC + ++ +VG +P F++
Sbjct: 102 TMYNRKPVGKYYIQVCTTT-------PCMLRNSDSILEAIQKKLGIKVGETTPDKLFTLI 154
Query: 550 EX*NVLGACVNPPI 591
E LGACVN P+
Sbjct: 155 EV-ECLGACVNAPM 167
Score = 66.1 bits (154), Expect = 1e-10
Identities = 26/45 (57%), Positives = 35/45 (77%)
Frame = +2
Query: 119 SLFVHRDTPEDNPSIPFEFSQAXQKRVEALLAIYPEGHKRGAMIP 253
+LFVHRDTPE+NP PF+F+ KR+EA++ YPEGHK A++P
Sbjct: 19 ALFVHRDTPENNPDTPFDFTPENYKRIEAIVKNYPEGHKAAAVLP 63
>BC132760-1|AAI32761.1| 194|Homo sapiens hypothetical protein
LOC401296 protein.
Length = 194
Score = 32.7 bits (71), Expect = 1.4
Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Frame = -3
Query: 293 GIQPPLCRCARSSKESWH-LACDL---QGKWPTKPLLSFXXPARTQRECSGCPLECLGGQ 126
G+ PLCRCA + + H C L G PT P + + PA R C G P G
Sbjct: 98 GVHRPLCRCAHTQQGYVHRRVCVLAPGSGSRPT-PHIVYSVPA--ARTCLGAP----GSL 150
Query: 125 TDCHVALMLWSELT*RTYATSPV 57
+ CH+ + + + TY+ +PV
Sbjct: 151 SPCHLCVHICA----HTYSGTPV 169
>AK125766-1|BAC86279.1| 194|Homo sapiens protein ( Homo sapiens
cDNA FLJ43778 fis, clone TESTI2051279. ).
Length = 194
Score = 32.3 bits (70), Expect = 1.9
Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Frame = -3
Query: 293 GIQPPLCRCARSSKESWH-LACDLQGKWPTKPLLSFXXPARTQRECSGCPLECLGGQTDC 117
G+ PLCRCA + + H C L ++P R C G P G + C
Sbjct: 98 GVHRPLCRCAHTQQGYVHRRVCVLAPGGGSRPTPHIVYSVPAARTCLGAP----GSLSPC 153
Query: 116 HVALMLWSELT*RTYATSPV 57
H+ + + + TY+ +PV
Sbjct: 154 HLCVHICA----HTYSGTPV 169
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,342,502
Number of Sequences: 237096
Number of extensions: 3067150
Number of successful extensions: 9020
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8797
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9014
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8847149012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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