Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30155
         (742 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77663-9|CAB01203.1|  239|Caenorhabditis elegans Hypothetical pr...    97   1e-20
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr...    31   0.65 
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr...    31   0.65 
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p...    31   0.65 
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p...    31   0.65 

>Z77663-9|CAB01203.1|  239|Caenorhabditis elegans Hypothetical
           protein F53F4.10 protein.
          Length = 239

 Score = 97.1 bits (231), Expect = 1e-20
 Identities = 53/113 (46%), Positives = 69/113 (61%)
 Frame = +1

Query: 253 LLDLAQRQSGGWIPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVLGLNPR 432
           LLDLAQRQ G W+PISAMH+VA+IL +P+MR YEVATFYTMF R+P+GKY +QV      
Sbjct: 71  LLDLAQRQHG-WLPISAMHEVAKILEVPRMRAYEVATFYTMFNRQPVGKYFLQVCATT-- 127

Query: 433 GKXPYPCGFEALMPY*MQLNREPNCEVGGNSPCGKFSVSEX*NVLGACVNPPI 591
                PC           + ++     G  +  G F+++E    LGACVN P+
Sbjct: 128 -----PCMLRGAETITETIEKKLGIHAGETTKDGLFTLAEV-ECLGACVNAPM 174



 Score = 60.5 bits (140), Expect = 1e-09
 Identities = 24/44 (54%), Positives = 35/44 (79%)
 Frame = +2

Query: 122 LFVHRDTPEDNPSIPFEFSQAXQKRVEALLAIYPEGHKRGAMIP 253
           L VHRDT E+N ++ F+F+   Q+R++A++ IYPEGHK GA+IP
Sbjct: 27  LMVHRDTKENNLNVKFKFTSENQERIKAIMDIYPEGHKAGALIP 70


>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical
           protein F53B7.5b protein.
          Length = 2892

 Score = 31.5 bits (68), Expect = 0.65
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
 Frame = -3

Query: 221 GKWPTKPLLSFXXPART---QRECSGCPLECLGGQTDC 117
           G W T P ++   P      +R+CS  PL C GGQ  C
Sbjct: 60  GAWSTCPTVTVIDPTVVSVRKRDCSKSPLFCSGGQDTC 97


>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical
           protein F53B7.5a protein.
          Length = 3095

 Score = 31.5 bits (68), Expect = 0.65
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
 Frame = -3

Query: 221 GKWPTKPLLSFXXPART---QRECSGCPLECLGGQTDC 117
           G W T P ++   P      +R+CS  PL C GGQ  C
Sbjct: 60  GAWSTCPTVTVIDPTVVSVRKRDCSKSPLFCSGGQDTC 97


>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
           protein F53B7.5b protein.
          Length = 2892

 Score = 31.5 bits (68), Expect = 0.65
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
 Frame = -3

Query: 221 GKWPTKPLLSFXXPART---QRECSGCPLECLGGQTDC 117
           G W T P ++   P      +R+CS  PL C GGQ  C
Sbjct: 60  GAWSTCPTVTVIDPTVVSVRKRDCSKSPLFCSGGQDTC 97


>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
           protein F53B7.5a protein.
          Length = 3095

 Score = 31.5 bits (68), Expect = 0.65
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
 Frame = -3

Query: 221 GKWPTKPLLSFXXPART---QRECSGCPLECLGGQTDC 117
           G W T P ++   P      +R+CS  PL C GGQ  C
Sbjct: 60  GAWSTCPTVTVIDPTVVSVRKRDCSKSPLFCSGGQDTC 97


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,201,036
Number of Sequences: 27780
Number of extensions: 433434
Number of successful extensions: 855
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 854
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)