Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30152
(452 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L38941-1|AAC41916.1| 117|Homo sapiens ribosomal protein L34 pro... 92 9e-19
CR542242-1|CAG47038.1| 117|Homo sapiens RPL34 protein. 87 2e-17
CR542232-1|CAG47028.1| 117|Homo sapiens RPL34 protein. 87 2e-17
BC106009-1|AAI06010.1| 117|Homo sapiens ribosomal protein L34 p... 87 2e-17
BC070208-1|AAH70208.1| 117|Homo sapiens ribosomal protein L34 p... 87 2e-17
BC001773-1|AAH01773.1| 117|Homo sapiens ribosomal protein L34 p... 87 2e-17
AB061832-1|BAB79470.1| 117|Homo sapiens ribosomal protein L34 p... 87 2e-17
AB007181-1|BAA25840.1| 45|Homo sapiens ribosomal protein L34 p... 60 3e-09
BC037582-1|AAH37582.1| 349|Homo sapiens ATXN7L2 protein protein. 30 3.2
BC036849-1|AAH36849.1| 580|Homo sapiens ataxin 7-like 2 protein. 30 3.2
AL355145-2|CAI22938.1| 349|Homo sapiens ataxin 7-like 2 protein. 30 3.2
AL355145-1|CAI22937.1| 722|Homo sapiens ataxin 7-like 2 protein. 30 3.2
Z99572-8|CAI23064.1| 753|Homo sapiens selectin P (granule membr... 29 9.8
Z99572-7|CAI23063.1| 829|Homo sapiens selectin P (granule membr... 29 9.8
Z99572-6|CAI23062.1| 645|Homo sapiens selectin P (granule membr... 29 9.8
Z99572-5|CAI23058.1| 830|Homo sapiens selectin P (granule membr... 29 9.8
Z99572-4|CAI23060.1| 646|Homo sapiens selectin P (granule membr... 29 9.8
Z99572-3|CAI23057.1| 768|Homo sapiens selectin P (granule membr... 29 9.8
Z99572-1|CAI23061.1| 768|Homo sapiens selectin P (granule membr... 29 9.8
M60234-1|AAA35910.1| 830|Homo sapiens granule membrane protein-... 29 9.8
M25322-1|AAA35911.1| 830|Homo sapiens protein ( Human granule m... 29 9.8
BC068533-1|AAH68533.1| 829|Homo sapiens selectin P (granule mem... 29 9.8
BC028067-1|AAH28067.2| 789|Homo sapiens SELP protein protein. 29 9.8
AL022146-8|CAI22758.1| 753|Homo sapiens selectin P (granule mem... 29 9.8
AL022146-7|CAI22757.1| 829|Homo sapiens selectin P (granule mem... 29 9.8
AL022146-6|CAI22756.1| 645|Homo sapiens selectin P (granule mem... 29 9.8
AL022146-5|CAI22753.1| 830|Homo sapiens selectin P (granule mem... 29 9.8
AL022146-4|CAI22755.1| 646|Homo sapiens selectin P (granule mem... 29 9.8
AL022146-3|CAI22752.1| 768|Homo sapiens selectin P (granule mem... 29 9.8
AL022146-1|CAI22751.1| 768|Homo sapiens selectin P (granule mem... 29 9.8
AF542391-1|AAN06828.1| 830|Homo sapiens selectin P (granule mem... 29 9.8
>L38941-1|AAC41916.1| 117|Homo sapiens ribosomal protein L34
protein.
Length = 117
Score = 91.9 bits (218), Expect = 9e-19
Identities = 45/76 (59%), Positives = 52/76 (68%), Gaps = 2/76 (2%)
Frame = +1
Query: 34 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPR--CGQCKSKLRGIQPAR 207
MVQRLT+RRRLSYNT SN+ R+ RTPG R+VY Y KK K P+ CG C KLRG++P R
Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGKLRGVRPVR 60
Query: 208 PAERSRLCYRKKTVKR 255
P RL KK V R
Sbjct: 61 PKVLMRLSKTKKHVSR 76
Score = 46.8 bits (106), Expect = 3e-05
Identities = 23/30 (76%), Positives = 25/30 (83%), Gaps = 1/30 (3%)
Frame = +3
Query: 258 YGGVLCHKCVKQRIVRAFLIEEQK-IVKVL 344
YGG +C KCV+ RI RAFLIEEQK IVKVL
Sbjct: 78 YGGSMCAKCVRDRIKRAFLIEEQKIIVKVL 107
>CR542242-1|CAG47038.1| 117|Homo sapiens RPL34 protein.
Length = 117
Score = 87.4 bits (207), Expect = 2e-17
Identities = 43/76 (56%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Frame = +1
Query: 34 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPR--CGQCKSKLRGIQPAR 207
MVQRLT+RRRLSYNT SN+ R+ RTPG R+VY Y KK K P+ CG C +LRG++ R
Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVR 60
Query: 208 PAERSRLCYRKKTVKR 255
P RL KK V R
Sbjct: 61 PKVLMRLSKTKKHVSR 76
Score = 46.8 bits (106), Expect = 3e-05
Identities = 23/30 (76%), Positives = 25/30 (83%), Gaps = 1/30 (3%)
Frame = +3
Query: 258 YGGVLCHKCVKQRIVRAFLIEEQKI-VKVL 344
YGG +C KCV+ RI RAFLIEEQKI VKVL
Sbjct: 78 YGGSMCAKCVRDRIKRAFLIEEQKIVVKVL 107
>CR542232-1|CAG47028.1| 117|Homo sapiens RPL34 protein.
Length = 117
Score = 87.4 bits (207), Expect = 2e-17
Identities = 43/76 (56%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Frame = +1
Query: 34 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPR--CGQCKSKLRGIQPAR 207
MVQRLT+RRRLSYNT SN+ R+ RTPG R+VY Y KK K P+ CG C +LRG++ R
Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVR 60
Query: 208 PAERSRLCYRKKTVKR 255
P RL KK V R
Sbjct: 61 PKVLMRLSKTKKHVSR 76
Score = 46.8 bits (106), Expect = 3e-05
Identities = 23/30 (76%), Positives = 25/30 (83%), Gaps = 1/30 (3%)
Frame = +3
Query: 258 YGGVLCHKCVKQRIVRAFLIEEQKI-VKVL 344
YGG +C KCV+ RI RAFLIEEQKI VKVL
Sbjct: 78 YGGSMCAKCVRDRIKRAFLIEEQKIVVKVL 107
>BC106009-1|AAI06010.1| 117|Homo sapiens ribosomal protein L34
protein.
Length = 117
Score = 87.4 bits (207), Expect = 2e-17
Identities = 43/76 (56%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Frame = +1
Query: 34 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPR--CGQCKSKLRGIQPAR 207
MVQRLT+RRRLSYNT SN+ R+ RTPG R+VY Y KK K P+ CG C +LRG++ R
Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVR 60
Query: 208 PAERSRLCYRKKTVKR 255
P RL KK V R
Sbjct: 61 PKVLMRLSKTKKHVSR 76
Score = 46.8 bits (106), Expect = 3e-05
Identities = 23/30 (76%), Positives = 25/30 (83%), Gaps = 1/30 (3%)
Frame = +3
Query: 258 YGGVLCHKCVKQRIVRAFLIEEQKI-VKVL 344
YGG +C KCV+ RI RAFLIEEQKI VKVL
Sbjct: 78 YGGSMCAKCVRDRIKRAFLIEEQKIVVKVL 107
>BC070208-1|AAH70208.1| 117|Homo sapiens ribosomal protein L34
protein.
Length = 117
Score = 87.4 bits (207), Expect = 2e-17
Identities = 43/76 (56%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Frame = +1
Query: 34 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPR--CGQCKSKLRGIQPAR 207
MVQRLT+RRRLSYNT SN+ R+ RTPG R+VY Y KK K P+ CG C +LRG++ R
Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVR 60
Query: 208 PAERSRLCYRKKTVKR 255
P RL KK V R
Sbjct: 61 PKVLMRLSKTKKHVSR 76
Score = 46.8 bits (106), Expect = 3e-05
Identities = 23/30 (76%), Positives = 25/30 (83%), Gaps = 1/30 (3%)
Frame = +3
Query: 258 YGGVLCHKCVKQRIVRAFLIEEQKI-VKVL 344
YGG +C KCV+ RI RAFLIEEQKI VKVL
Sbjct: 78 YGGSMCAKCVRDRIKRAFLIEEQKIVVKVL 107
>BC001773-1|AAH01773.1| 117|Homo sapiens ribosomal protein L34
protein.
Length = 117
Score = 87.4 bits (207), Expect = 2e-17
Identities = 43/76 (56%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Frame = +1
Query: 34 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPR--CGQCKSKLRGIQPAR 207
MVQRLT+RRRLSYNT SN+ R+ RTPG R+VY Y KK K P+ CG C +LRG++ R
Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVR 60
Query: 208 PAERSRLCYRKKTVKR 255
P RL KK V R
Sbjct: 61 PKVLMRLSKTKKHVSR 76
Score = 46.8 bits (106), Expect = 3e-05
Identities = 23/30 (76%), Positives = 25/30 (83%), Gaps = 1/30 (3%)
Frame = +3
Query: 258 YGGVLCHKCVKQRIVRAFLIEEQKI-VKVL 344
YGG +C KCV+ RI RAFLIEEQKI VKVL
Sbjct: 78 YGGSMCAKCVRDRIKRAFLIEEQKIVVKVL 107
>AB061832-1|BAB79470.1| 117|Homo sapiens ribosomal protein L34
protein.
Length = 117
Score = 87.4 bits (207), Expect = 2e-17
Identities = 43/76 (56%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Frame = +1
Query: 34 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPR--CGQCKSKLRGIQPAR 207
MVQRLT+RRRLSYNT SN+ R+ RTPG R+VY Y KK K P+ CG C +LRG++ R
Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVR 60
Query: 208 PAERSRLCYRKKTVKR 255
P RL KK V R
Sbjct: 61 PKVLMRLSKTKKHVSR 76
Score = 46.8 bits (106), Expect = 3e-05
Identities = 23/30 (76%), Positives = 25/30 (83%), Gaps = 1/30 (3%)
Frame = +3
Query: 258 YGGVLCHKCVKQRIVRAFLIEEQKI-VKVL 344
YGG +C KCV+ RI RAFLIEEQKI VKVL
Sbjct: 78 YGGSMCAKCVRDRIKRAFLIEEQKIVVKVL 107
>AB007181-1|BAA25840.1| 45|Homo sapiens ribosomal protein L34
protein.
Length = 45
Score = 60.1 bits (139), Expect = 3e-09
Identities = 28/44 (63%), Positives = 33/44 (75%), Gaps = 2/44 (4%)
Frame = +1
Query: 43 RLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPR--CG 168
RLT+RRRLSYNT SN+ R+ RTPG R+VY Y KK K P+ CG
Sbjct: 1 RLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACG 44
>BC037582-1|AAH37582.1| 349|Homo sapiens ATXN7L2 protein protein.
Length = 349
Score = 30.3 bits (65), Expect = 3.2
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = -2
Query: 388 FVAFFADLVLACCAL--RTFTIFCSSMRKALTMRCLTHLWQRTPP 260
F F + LV C + R FCS++ L TH+W++ PP
Sbjct: 40 FCTFGSRLVSPGCYVFSRRLDRFCSALSSMLERHLSTHMWKKIPP 84
>BC036849-1|AAH36849.1| 580|Homo sapiens ataxin 7-like 2 protein.
Length = 580
Score = 30.3 bits (65), Expect = 3.2
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = -2
Query: 388 FVAFFADLVLACCAL--RTFTIFCSSMRKALTMRCLTHLWQRTPP 260
F F + LV C + R FCS++ L TH+W++ PP
Sbjct: 413 FCTFGSRLVSPGCYVFSRRLDRFCSALSSMLERHLSTHMWKKIPP 457
>AL355145-2|CAI22938.1| 349|Homo sapiens ataxin 7-like 2 protein.
Length = 349
Score = 30.3 bits (65), Expect = 3.2
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = -2
Query: 388 FVAFFADLVLACCAL--RTFTIFCSSMRKALTMRCLTHLWQRTPP 260
F F + LV C + R FCS++ L TH+W++ PP
Sbjct: 40 FCTFGSRLVSPGCYVFSRRLDRFCSALSSMLERHLSTHMWKKIPP 84
>AL355145-1|CAI22937.1| 722|Homo sapiens ataxin 7-like 2 protein.
Length = 722
Score = 30.3 bits (65), Expect = 3.2
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = -2
Query: 388 FVAFFADLVLACCAL--RTFTIFCSSMRKALTMRCLTHLWQRTPP 260
F F + LV C + R FCS++ L TH+W++ PP
Sbjct: 413 FCTFGSRLVSPGCYVFSRRLDRFCSALSSMLERHLSTHMWKKIPP 457
>Z99572-8|CAI23064.1| 753|Homo sapiens selectin P (granule membrane
protein 140kDa, antigen CD62) protein.
Length = 753
Score = 28.7 bits (61), Expect = 9.8
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = +2
Query: 254 GLWWCPLP*MCQATHCQSL--PH*RTKNCEGPQG 349
G W P P +CQA CQ L P+ NC P G
Sbjct: 357 GQWTAPAP-VCQALQCQDLPVPNEARVNCSHPFG 389
>Z99572-7|CAI23063.1| 829|Homo sapiens selectin P (granule membrane
protein 140kDa, antigen CD62) protein.
Length = 829
Score = 28.7 bits (61), Expect = 9.8
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = +2
Query: 254 GLWWCPLP*MCQATHCQSL--PH*RTKNCEGPQG 349
G W P P +CQA CQ L P+ NC P G
Sbjct: 433 GQWTAPAP-VCQALQCQDLPVPNEARVNCSHPFG 465
>Z99572-6|CAI23062.1| 645|Homo sapiens selectin P (granule membrane
protein 140kDa, antigen CD62) protein.
Length = 645
Score = 28.7 bits (61), Expect = 9.8
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = +2
Query: 254 GLWWCPLP*MCQATHCQSL--PH*RTKNCEGPQG 349
G W P P +CQA CQ L P+ NC P G
Sbjct: 371 GQWTAPAP-VCQALQCQDLPVPNEARVNCSHPFG 403
>Z99572-5|CAI23058.1| 830|Homo sapiens selectin P (granule membrane
protein 140kDa, antigen CD62) protein.
Length = 830
Score = 28.7 bits (61), Expect = 9.8
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = +2
Query: 254 GLWWCPLP*MCQATHCQSL--PH*RTKNCEGPQG 349
G W P P +CQA CQ L P+ NC P G
Sbjct: 434 GQWTAPAP-VCQALQCQDLPVPNEARVNCSHPFG 466
>Z99572-4|CAI23060.1| 646|Homo sapiens selectin P (granule membrane
protein 140kDa, antigen CD62) protein.
Length = 646
Score = 28.7 bits (61), Expect = 9.8
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = +2
Query: 254 GLWWCPLP*MCQATHCQSL--PH*RTKNCEGPQG 349
G W P P +CQA CQ L P+ NC P G
Sbjct: 372 GQWTAPAP-VCQALQCQDLPVPNEARVNCSHPFG 404
>Z99572-3|CAI23057.1| 768|Homo sapiens selectin P (granule membrane
protein 140kDa, antigen CD62) protein.
Length = 768
Score = 28.7 bits (61), Expect = 9.8
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = +2
Query: 254 GLWWCPLP*MCQATHCQSL--PH*RTKNCEGPQG 349
G W P P +CQA CQ L P+ NC P G
Sbjct: 372 GQWTAPAP-VCQALQCQDLPVPNEARVNCSHPFG 404
>Z99572-1|CAI23061.1| 768|Homo sapiens selectin P (granule membrane
protein 140kDa, antigen CD62) protein.
Length = 768
Score = 28.7 bits (61), Expect = 9.8
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = +2
Query: 254 GLWWCPLP*MCQATHCQSL--PH*RTKNCEGPQG 349
G W P P +CQA CQ L P+ NC P G
Sbjct: 372 GQWTAPAP-VCQALQCQDLPVPNEARVNCSHPFG 404
>M60234-1|AAA35910.1| 830|Homo sapiens granule membrane protein-140
protein.
Length = 830
Score = 28.7 bits (61), Expect = 9.8
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = +2
Query: 254 GLWWCPLP*MCQATHCQSL--PH*RTKNCEGPQG 349
G W P P +CQA CQ L P+ NC P G
Sbjct: 434 GQWTAPAP-VCQALQCQDLPVPNEARVNCSHPFG 466
>M25322-1|AAA35911.1| 830|Homo sapiens protein ( Human granule
membrane protein-140 mRNA, complete cds. ).
Length = 830
Score = 28.7 bits (61), Expect = 9.8
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = +2
Query: 254 GLWWCPLP*MCQATHCQSL--PH*RTKNCEGPQG 349
G W P P +CQA CQ L P+ NC P G
Sbjct: 434 GQWTAPAP-VCQALQCQDLPVPNEARVNCSHPFG 466
>BC068533-1|AAH68533.1| 829|Homo sapiens selectin P (granule
membrane protein 140kDa, antigen CD62) protein.
Length = 829
Score = 28.7 bits (61), Expect = 9.8
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = +2
Query: 254 GLWWCPLP*MCQATHCQSL--PH*RTKNCEGPQG 349
G W P P +CQA CQ L P+ NC P G
Sbjct: 434 GQWTAPAP-VCQALQCQDLPVPNEARVNCSHPFG 466
>BC028067-1|AAH28067.2| 789|Homo sapiens SELP protein protein.
Length = 789
Score = 28.7 bits (61), Expect = 9.8
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = +2
Query: 254 GLWWCPLP*MCQATHCQSL--PH*RTKNCEGPQG 349
G W P P +CQA CQ L P+ NC P G
Sbjct: 433 GQWTAPAP-VCQALQCQDLPVPNEARVNCSHPFG 465
>AL022146-8|CAI22758.1| 753|Homo sapiens selectin P (granule
membrane protein 140kDa, antigen CD62) protein.
Length = 753
Score = 28.7 bits (61), Expect = 9.8
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = +2
Query: 254 GLWWCPLP*MCQATHCQSL--PH*RTKNCEGPQG 349
G W P P +CQA CQ L P+ NC P G
Sbjct: 357 GQWTAPAP-VCQALQCQDLPVPNEARVNCSHPFG 389
>AL022146-7|CAI22757.1| 829|Homo sapiens selectin P (granule
membrane protein 140kDa, antigen CD62) protein.
Length = 829
Score = 28.7 bits (61), Expect = 9.8
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = +2
Query: 254 GLWWCPLP*MCQATHCQSL--PH*RTKNCEGPQG 349
G W P P +CQA CQ L P+ NC P G
Sbjct: 433 GQWTAPAP-VCQALQCQDLPVPNEARVNCSHPFG 465
>AL022146-6|CAI22756.1| 645|Homo sapiens selectin P (granule
membrane protein 140kDa, antigen CD62) protein.
Length = 645
Score = 28.7 bits (61), Expect = 9.8
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = +2
Query: 254 GLWWCPLP*MCQATHCQSL--PH*RTKNCEGPQG 349
G W P P +CQA CQ L P+ NC P G
Sbjct: 371 GQWTAPAP-VCQALQCQDLPVPNEARVNCSHPFG 403
>AL022146-5|CAI22753.1| 830|Homo sapiens selectin P (granule
membrane protein 140kDa, antigen CD62) protein.
Length = 830
Score = 28.7 bits (61), Expect = 9.8
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = +2
Query: 254 GLWWCPLP*MCQATHCQSL--PH*RTKNCEGPQG 349
G W P P +CQA CQ L P+ NC P G
Sbjct: 434 GQWTAPAP-VCQALQCQDLPVPNEARVNCSHPFG 466
>AL022146-4|CAI22755.1| 646|Homo sapiens selectin P (granule
membrane protein 140kDa, antigen CD62) protein.
Length = 646
Score = 28.7 bits (61), Expect = 9.8
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = +2
Query: 254 GLWWCPLP*MCQATHCQSL--PH*RTKNCEGPQG 349
G W P P +CQA CQ L P+ NC P G
Sbjct: 372 GQWTAPAP-VCQALQCQDLPVPNEARVNCSHPFG 404
>AL022146-3|CAI22752.1| 768|Homo sapiens selectin P (granule
membrane protein 140kDa, antigen CD62) protein.
Length = 768
Score = 28.7 bits (61), Expect = 9.8
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = +2
Query: 254 GLWWCPLP*MCQATHCQSL--PH*RTKNCEGPQG 349
G W P P +CQA CQ L P+ NC P G
Sbjct: 372 GQWTAPAP-VCQALQCQDLPVPNEARVNCSHPFG 404
>AL022146-1|CAI22751.1| 768|Homo sapiens selectin P (granule
membrane protein 140kDa, antigen CD62) protein.
Length = 768
Score = 28.7 bits (61), Expect = 9.8
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = +2
Query: 254 GLWWCPLP*MCQATHCQSL--PH*RTKNCEGPQG 349
G W P P +CQA CQ L P+ NC P G
Sbjct: 372 GQWTAPAP-VCQALQCQDLPVPNEARVNCSHPFG 404
>AF542391-1|AAN06828.1| 830|Homo sapiens selectin P (granule
membrane protein 140kDa, antigen CD62) protein.
Length = 830
Score = 28.7 bits (61), Expect = 9.8
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = +2
Query: 254 GLWWCPLP*MCQATHCQSL--PH*RTKNCEGPQG 349
G W P P +CQA CQ L P+ NC P G
Sbjct: 434 GQWTAPAP-VCQALQCQDLPVPNEARVNCSHPFG 466
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,407,934
Number of Sequences: 237096
Number of extensions: 1376565
Number of successful extensions: 7090
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 6951
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7083
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3758237868
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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