Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30152
         (452 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089676-1|AAL90414.1|  168|Drosophila melanogaster RH48056p pro...   123   1e-28
AE014297-925|AAN13422.1|  168|Drosophila melanogaster CG9354-PB,...   123   1e-28
AE014297-924|AAF54369.1|  168|Drosophila melanogaster CG9354-PA,...   123   1e-28
AE014297-3917|AAN14070.1|  162|Drosophila melanogaster CG6090-PB...   122   2e-28
AE014297-3916|AAF56564.2|  162|Drosophila melanogaster CG6090-PA...   122   2e-28
AY071577-1|AAL49199.1|  162|Drosophila melanogaster RE63456p pro...   119   2e-27
AE014297-3919|AAF56566.1|  201|Drosophila melanogaster CG14551-P...    29   2.2  
BT022454-1|AAY54870.1|  135|Drosophila melanogaster IP05788p pro...    29   3.9  
BT022433-1|AAY54849.1|  135|Drosophila melanogaster IP05688p pro...    29   3.9  
AY113610-1|AAM29615.1|  827|Drosophila melanogaster RH61467p pro...    28   6.8  
AE014298-1218|AAF46401.2|  827|Drosophila melanogaster CG12772-P...    28   6.8  
AE014134-1389|AAF52597.3| 2898|Drosophila melanogaster CG7466-PA...    28   6.8  

>AY089676-1|AAL90414.1|  168|Drosophila melanogaster RH48056p
           protein.
          Length = 168

 Score =  123 bits (296), Expect = 1e-28
 Identities = 56/74 (75%), Positives = 63/74 (85%)
 Frame = +1

Query: 34  MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRGIQPARPA 213
           MVQRLT RRRLSYNT+SN+RRIVRTPGGRLVYQYVKK   +PRCGQCK KL+GI P+RP+
Sbjct: 1   MVQRLTLRRRLSYNTRSNKRRIVRTPGGRLVYQYVKKNPTVPRCGQCKEKLKGITPSRPS 60

Query: 214 ERSRLCYRKKTVKR 255
           ER R+  R KTV R
Sbjct: 61  ERPRMSKRLKTVSR 74



 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 24/29 (82%), Positives = 27/29 (93%)
 Frame = +3

Query: 258 YGGVLCHKCVKQRIVRAFLIEEQKIVKVL 344
           YGGVLCH C+++RIVRAFLIEEQKIVK L
Sbjct: 76  YGGVLCHSCLRERIVRAFLIEEQKIVKAL 104


>AE014297-925|AAN13422.1|  168|Drosophila melanogaster CG9354-PB,
           isoform B protein.
          Length = 168

 Score =  123 bits (296), Expect = 1e-28
 Identities = 56/74 (75%), Positives = 63/74 (85%)
 Frame = +1

Query: 34  MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRGIQPARPA 213
           MVQRLT RRRLSYNT+SN+RRIVRTPGGRLVYQYVKK   +PRCGQCK KL+GI P+RP+
Sbjct: 1   MVQRLTLRRRLSYNTRSNKRRIVRTPGGRLVYQYVKKNPTVPRCGQCKEKLKGITPSRPS 60

Query: 214 ERSRLCYRKKTVKR 255
           ER R+  R KTV R
Sbjct: 61  ERPRMSKRLKTVSR 74



 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 24/29 (82%), Positives = 27/29 (93%)
 Frame = +3

Query: 258 YGGVLCHKCVKQRIVRAFLIEEQKIVKVL 344
           YGGVLCH C+++RIVRAFLIEEQKIVK L
Sbjct: 76  YGGVLCHSCLRERIVRAFLIEEQKIVKAL 104


>AE014297-924|AAF54369.1|  168|Drosophila melanogaster CG9354-PA,
           isoform A protein.
          Length = 168

 Score =  123 bits (296), Expect = 1e-28
 Identities = 56/74 (75%), Positives = 63/74 (85%)
 Frame = +1

Query: 34  MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRGIQPARPA 213
           MVQRLT RRRLSYNT+SN+RRIVRTPGGRLVYQYVKK   +PRCGQCK KL+GI P+RP+
Sbjct: 1   MVQRLTLRRRLSYNTRSNKRRIVRTPGGRLVYQYVKKNPTVPRCGQCKEKLKGITPSRPS 60

Query: 214 ERSRLCYRKKTVKR 255
           ER R+  R KTV R
Sbjct: 61  ERPRMSKRLKTVSR 74



 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 24/29 (82%), Positives = 27/29 (93%)
 Frame = +3

Query: 258 YGGVLCHKCVKQRIVRAFLIEEQKIVKVL 344
           YGGVLCH C+++RIVRAFLIEEQKIVK L
Sbjct: 76  YGGVLCHSCLRERIVRAFLIEEQKIVKAL 104


>AE014297-3917|AAN14070.1|  162|Drosophila melanogaster CG6090-PB,
           isoform B protein.
          Length = 162

 Score =  122 bits (294), Expect = 2e-28
 Identities = 56/74 (75%), Positives = 62/74 (83%)
 Frame = +1

Query: 34  MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRGIQPARPA 213
           MVQRLT RRRLSYNT+SN+RRIVRTPGGRLVYQYVKK   +PRCGQCK KL GI P+RP+
Sbjct: 1   MVQRLTLRRRLSYNTRSNKRRIVRTPGGRLVYQYVKKNPTVPRCGQCKEKLHGITPSRPS 60

Query: 214 ERSRLCYRKKTVKR 255
           ER R+  R KTV R
Sbjct: 61  ERPRMSKRLKTVSR 74



 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 24/29 (82%), Positives = 27/29 (93%)
 Frame = +3

Query: 258 YGGVLCHKCVKQRIVRAFLIEEQKIVKVL 344
           YGGVLCH C+++RIVRAFLIEEQKIVK L
Sbjct: 76  YGGVLCHSCLRERIVRAFLIEEQKIVKAL 104


>AE014297-3916|AAF56564.2|  162|Drosophila melanogaster CG6090-PA,
           isoform A protein.
          Length = 162

 Score =  122 bits (294), Expect = 2e-28
 Identities = 56/74 (75%), Positives = 62/74 (83%)
 Frame = +1

Query: 34  MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRGIQPARPA 213
           MVQRLT RRRLSYNT+SN+RRIVRTPGGRLVYQYVKK   +PRCGQCK KL GI P+RP+
Sbjct: 1   MVQRLTLRRRLSYNTRSNKRRIVRTPGGRLVYQYVKKNPTVPRCGQCKEKLHGITPSRPS 60

Query: 214 ERSRLCYRKKTVKR 255
           ER R+  R KTV R
Sbjct: 61  ERPRMSKRLKTVSR 74



 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 24/29 (82%), Positives = 27/29 (93%)
 Frame = +3

Query: 258 YGGVLCHKCVKQRIVRAFLIEEQKIVKVL 344
           YGGVLCH C+++RIVRAFLIEEQKIVK L
Sbjct: 76  YGGVLCHSCLRERIVRAFLIEEQKIVKAL 104


>AY071577-1|AAL49199.1|  162|Drosophila melanogaster RE63456p
           protein.
          Length = 162

 Score =  119 bits (286), Expect = 2e-27
 Identities = 55/74 (74%), Positives = 61/74 (82%)
 Frame = +1

Query: 34  MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRGIQPARPA 213
           MVQRLT RRRLSYNT+SN+RRIVRTPGGRLVYQYVKK   +PRCGQCK KL GI  +RP+
Sbjct: 1   MVQRLTLRRRLSYNTRSNKRRIVRTPGGRLVYQYVKKNPTVPRCGQCKEKLHGITASRPS 60

Query: 214 ERSRLCYRKKTVKR 255
           ER R+  R KTV R
Sbjct: 61  ERPRMSKRLKTVSR 74



 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 24/29 (82%), Positives = 27/29 (93%)
 Frame = +3

Query: 258 YGGVLCHKCVKQRIVRAFLIEEQKIVKVL 344
           YGGVLCH C+++RIVRAFLIEEQKIVK L
Sbjct: 76  YGGVLCHSCLRERIVRAFLIEEQKIVKAL 104


>AE014297-3919|AAF56566.1|  201|Drosophila melanogaster CG14551-PA
           protein.
          Length = 201

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 14/51 (27%), Positives = 23/51 (45%)
 Frame = +1

Query: 103 RTPGGRLVYQYVKKPKKIPRCGQCKSKLRGIQPARPAERSRLCYRKKTVKR 255
           + P G L+Y  + KP  + RC  C       + A P +R+     +K+  R
Sbjct: 115 KQPPGPLIYGMLPKPAVVGRCPTCSGNPERTEVAIPEQRTPWAPERKSWNR 165


>BT022454-1|AAY54870.1|  135|Drosophila melanogaster IP05788p
           protein.
          Length = 135

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 20/76 (26%), Positives = 37/76 (48%)
 Frame = +1

Query: 16  LSKSLKMVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRGI 195
           LS ++K         +LSY TKSN   +++ P        VK  KK+ +  +CK + R +
Sbjct: 65  LSNNIKNFNNNEKIMQLSYITKSNVNSVIKFPA-----MSVKDKKKLNKKNKCK-RTRKV 118

Query: 196 QPARPAERSRLCYRKK 243
           +  +  ++ +   +KK
Sbjct: 119 EKKKKKKKKKKKKKKK 134


>BT022433-1|AAY54849.1|  135|Drosophila melanogaster IP05688p
           protein.
          Length = 135

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 20/76 (26%), Positives = 37/76 (48%)
 Frame = +1

Query: 16  LSKSLKMVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRGI 195
           LS ++K         +LSY TKSN   +++ P        VK  KK+ +  +CK + R +
Sbjct: 65  LSNNIKNFNNNEKIMQLSYITKSNVNSVIKFPA-----MSVKDKKKLNKKNKCK-RTRKV 118

Query: 196 QPARPAERSRLCYRKK 243
           +  +  ++ +   +KK
Sbjct: 119 EKKKKKKKKKKKKKKK 134


>AY113610-1|AAM29615.1|  827|Drosophila melanogaster RH61467p
           protein.
          Length = 827

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +1

Query: 112 GGRLVYQYVKKPKKIPRCGQC 174
           GG L+Y + +K ++  RCG C
Sbjct: 777 GGELIYPWQRKVQRCDRCGAC 797


>AE014298-1218|AAF46401.2|  827|Drosophila melanogaster CG12772-PA
           protein.
          Length = 827

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +1

Query: 112 GGRLVYQYVKKPKKIPRCGQC 174
           GG L+Y + +K ++  RCG C
Sbjct: 777 GGELIYPWQRKVQRCDRCGAC 797


>AE014134-1389|AAF52597.3| 2898|Drosophila melanogaster CG7466-PA
           protein.
          Length = 2898

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = -2

Query: 196 GYHG-VCSCTDHTLGSSWAF*HTD 128
           GY G +C  +DH  GSSW +  TD
Sbjct: 204 GYSGRLCDLSDHPAGSSWRWLATD 227


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,220,452
Number of Sequences: 53049
Number of extensions: 391079
Number of successful extensions: 939
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 939
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1476622287
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)