Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30147
         (417 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   4.8  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    21   4.8  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   4.8  
S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subu...    21   6.4  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   6.4  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    20   8.4  

>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -3

Query: 163 TGSDFLIGMQAWSSSRSLRQISRWS 89
           TG +        + S SLR  SRWS
Sbjct: 345 TGGNSASNSSGDAQSTSLRPFSRWS 369


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +3

Query: 357 TMLPKPVRFGALAPRVPAPT 416
           T  P+P +     PR P PT
Sbjct: 252 TPKPRPTKVSRRKPRPPRPT 271


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 412  GAGTLGAKAPNLTGF 368
            G G+ G+K+P + GF
Sbjct: 1119 GPGSTGSKSPPVAGF 1133


>S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subunit
           protein.
          Length = 141

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 312 MTSRLALGILQKSTNTMLPK 371
           +T+ L +  L  STN  LPK
Sbjct: 104 VTTVLTMTTLMSSTNAALPK 123


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 117 LEEDHACIPIKKSDPVVSY 173
           L ED    PI+  +P+V Y
Sbjct: 66  LTEDLNSAPIRMKNPIVKY 84


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 9/43 (20%), Positives = 20/43 (46%)
 Frame = +3

Query: 147 KKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKASPCLMVC 275
           +KSD  + Y +   +E     +S + +++   +     C +VC
Sbjct: 23  RKSDSGIWYWQCNTDEETCTRISSTVSRNTDTYPTLETCRLVC 65


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,234
Number of Sequences: 336
Number of extensions: 2011
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9174063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)