Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30147
(417 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0662 + 30987187-30987277,30987825-30990214 125 2e-29
04_01_0103 + 1082077-1082167,1083037-1085477 124 3e-29
02_04_0017 + 18937774-18937864,18938505-18940945 124 3e-29
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 115 1e-26
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 85 3e-17
03_05_0511 + 25056018-25059107 72 2e-13
02_04_0148 - 20198407-20201424 67 6e-12
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 48 3e-06
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 42 3e-04
12_02_0788 - 23152810-23152975,23153618-23153862,23154529-23154723 34 0.053
07_01_0154 - 1094256-1094672,1094954-1094977,1095867-1095891,109... 31 0.49
10_08_0081 + 14710478-14710822 28 2.6
02_02_0340 + 9135846-9138377 28 3.5
05_07_0152 + 28044733-28045032,28045131-28045220,28045770-280458... 27 4.6
02_05_0921 + 32739495-32739696,32739815-32740002,32740132-327403... 27 6.0
02_04_0640 - 24664841-24664855,24664895-24664978,24665232-246653... 27 6.0
09_02_0409 - 8656136-8656318,8656469-8656609,8658608-8658756,865... 27 8.0
08_01_0314 + 2777971-2778607,2778809-2778885,2778964-2779011 27 8.0
06_01_0916 + 7058991-7059050,7060057-7061235,7061778-7063481,706... 27 8.0
05_07_0151 + 28038178-28038480,28038578-28038667,28039130-280391... 27 8.0
05_07_0054 + 27368832-27369287 27 8.0
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 125 bits (301), Expect = 2e-29
Identities = 62/87 (71%), Positives = 70/87 (80%), Gaps = 1/87 (1%)
Frame = +3
Query: 3 GLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRE 179
GLKRLAKSDPMV C EESGEHI+AGAGELHLEICLKDL+ED I S PVVS+RE
Sbjct: 503 GLKRLAKSDPMVLCTVEESGEHIIAGAGELHLEICLKDLQEDFMGGAEITVSPPVVSFRE 562
Query: 180 TVAEESDQLCLSKSPNKHNRLFMKASP 260
TV E+S + +SKSPNKHNRL+M+A P
Sbjct: 563 TVLEKSCRTVMSKSPNKHNRLYMEARP 589
Score = 77.4 bits (182), Expect = 4e-15
Identities = 33/56 (58%), Positives = 42/56 (75%)
Frame = +2
Query: 248 EG*PMPDGLPEDIDEGRVNSRDDFKTRARYLTEKYEYDVTEARKIWCFGPEGTGPN 415
E PM +GLPE IDEGR+ RDD K R++ L+E++ +D A+KIWCFGPE TGPN
Sbjct: 586 EARPMEEGLPEAIDEGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPN 641
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 124 bits (299), Expect = 3e-29
Identities = 62/87 (71%), Positives = 70/87 (80%), Gaps = 1/87 (1%)
Frame = +3
Query: 3 GLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRE 179
GLKRLAKSDPMV C EESGEHI+AGAGELHLEICLKDL+ED I S PVVS+RE
Sbjct: 507 GLKRLAKSDPMVLCTIEESGEHIIAGAGELHLEICLKDLQEDFMGGAEIIVSPPVVSFRE 566
Query: 180 TVAEESDQLCLSKSPNKHNRLFMKASP 260
TV E+S + +SKSPNKHNRL+M+A P
Sbjct: 567 TVLEKSCRTVMSKSPNKHNRLYMEARP 593
Score = 71.7 bits (168), Expect = 2e-13
Identities = 30/56 (53%), Positives = 41/56 (73%)
Frame = +2
Query: 248 EG*PMPDGLPEDIDEGRVNSRDDFKTRARYLTEKYEYDVTEARKIWCFGPEGTGPN 415
E P+ +GL E ID+GR+ RDD K R++ L+E++ +D A+KIWCFGPE TGPN
Sbjct: 590 EARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPN 645
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 124 bits (299), Expect = 3e-29
Identities = 62/87 (71%), Positives = 70/87 (80%), Gaps = 1/87 (1%)
Frame = +3
Query: 3 GLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRE 179
GLKRLAKSDPMV C EESGEHI+AGAGELHLEICLKDL+ED I S PVVS+RE
Sbjct: 507 GLKRLAKSDPMVLCTIEESGEHIIAGAGELHLEICLKDLQEDFMGGAEIIVSPPVVSFRE 566
Query: 180 TVAEESDQLCLSKSPNKHNRLFMKASP 260
TV E+S + +SKSPNKHNRL+M+A P
Sbjct: 567 TVLEKSCRTVMSKSPNKHNRLYMEARP 593
Score = 71.7 bits (168), Expect = 2e-13
Identities = 30/56 (53%), Positives = 41/56 (73%)
Frame = +2
Query: 248 EG*PMPDGLPEDIDEGRVNSRDDFKTRARYLTEKYEYDVTEARKIWCFGPEGTGPN 415
E P+ +GL E ID+GR+ RDD K R++ L+E++ +D A+KIWCFGPE TGPN
Sbjct: 590 EARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPN 645
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 115 bits (277), Expect = 1e-26
Identities = 53/87 (60%), Positives = 67/87 (77%), Gaps = 1/87 (1%)
Frame = +3
Query: 3 GLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRE 179
GLKRLAKSDP+V C EESGEH++AG G+LHLEIC+KDL+ED I P+++YRE
Sbjct: 509 GLKRLAKSDPLVVCTIEESGEHVIAGVGQLHLEICIKDLQEDFMGGAEIIVGPPIITYRE 568
Query: 180 TVAEESDQLCLSKSPNKHNRLFMKASP 260
TV + S + +SKSPNKHNRL+M+A P
Sbjct: 569 TVTKNSCRTVMSKSPNKHNRLYMEARP 595
Score = 52.8 bits (121), Expect = 1e-07
Identities = 21/44 (47%), Positives = 30/44 (68%)
Frame = +2
Query: 284 IDEGRVNSRDDFKTRARYLTEKYEYDVTEARKIWCFGPEGTGPN 415
ID+ R+ +DD K R + L+E++ +D A+KIW FGPE GPN
Sbjct: 612 IDDERIGPKDDIKERGKILSEEFGWDKDLAKKIWAFGPETKGPN 655
>06_03_0715 -
23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 84.6 bits (200), Expect = 3e-17
Identities = 37/86 (43%), Positives = 59/86 (68%)
Frame = +3
Query: 3 GLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRET 182
GL++++KS P+ EESGEH + G GEL+L+ +KDL E ++ + +K +DPVV++ ET
Sbjct: 630 GLRKISKSYPLAVTKVEESGEHTILGTGELYLDSIMKDLRELYSEVEVKVADPVVTFCET 689
Query: 183 VAEESDQLCLSKSPNKHNRLFMKASP 260
V + S C +++PNK N++ M A P
Sbjct: 690 VVDTSSMKCFAETPNKRNKITMVAEP 715
Score = 52.8 bits (121), Expect = 1e-07
Identities = 23/53 (43%), Positives = 31/53 (58%)
Frame = +2
Query: 257 PMPDGLPEDIDEGRVNSRDDFKTRARYLTEKYEYDVTEARKIWCFGPEGTGPN 415
P+ GL EDI+ G V+ K + ++Y++DV AR IW FGPE GPN
Sbjct: 715 PLEKGLAEDIENGLVSLDSRQKEITDFFRQRYQWDVLAARSIWAFGPEKQGPN 767
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 71.7 bits (168), Expect = 2e-13
Identities = 36/77 (46%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Frame = +3
Query: 3 GLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRET 182
GLK L ++DP V+ + GEH++A AGE+HLE C KDLEE A + + SDP+VS++ET
Sbjct: 556 GLKLLNRADPFVEYTVSQRGEHVLAAAGEIHLERCKKDLEERFAKVKLVVSDPLVSFKET 615
Query: 183 VAEESDQLCLS-KSPNK 230
+ E L S K+P +
Sbjct: 616 IEGEGLALIESLKAPRE 632
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 66.9 bits (156), Expect = 6e-12
Identities = 28/64 (43%), Positives = 46/64 (71%)
Frame = +3
Query: 3 GLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRET 182
GLK L ++DP ++ E GEH++A AGE+HLE C+K+L+E A + ++ S P+VS+++T
Sbjct: 536 GLKLLNQADPFIEYTVSERGEHVLAAAGEIHLEHCIKNLQERFARVQLEVSKPLVSFKDT 595
Query: 183 VAEE 194
+ E
Sbjct: 596 IQGE 599
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 48.0 bits (109), Expect = 3e-06
Identities = 23/66 (34%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Frame = +3
Query: 6 LKRLAKSDPMVQC-INEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRET 182
L R K DP + ++ ESGE I++G GELHL+I ++ + ++ + K P V++RET
Sbjct: 498 LNRFQKEDPTFRVGLDPESGETIISGMGELHLDIYVERIRREYK-VDAKVGKPRVNFRET 556
Query: 183 VAEESD 200
+ + ++
Sbjct: 557 ITQRAE 562
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 41.5 bits (93), Expect = 3e-04
Identities = 22/67 (32%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Frame = +3
Query: 3 GLKRLAKSDPMVQCI-NEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRE 179
GL +LA+ DP +EE+ + ++ G GELHL+I + L+ + + P V+YRE
Sbjct: 477 GLIKLAQEDPSFHFSRDEETNQTVIEGMGELHLDIIVDRLKREFR-VEANVGAPQVNYRE 535
Query: 180 TVAEESD 200
++++ S+
Sbjct: 536 SISKISE 542
>12_02_0788 - 23152810-23152975,23153618-23153862,23154529-23154723
Length = 201
Score = 33.9 bits (74), Expect = 0.053
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Frame = -3
Query: 373 GFGNIVFVLFCKIPSASLEVIAGIYATLINVLWQTIRHGLAFMNRRLCLLGD-FERQSWS 197
GFG ++ C I S + EV + + I G +F+ ++ +G + ++W
Sbjct: 58 GFGRSLYA-DCTIESVTKEVAVVTAQQRSKNIAEAIDTGFSFLRCKISGIGQIYLGRAWG 116
Query: 196 DSSATVSRYDTTGSDFL-IGMQAW 128
DSS V Y T G + + IG W
Sbjct: 117 DSSRVVYSYTTMGKEVVPIGWDGW 140
>07_01_0154 -
1094256-1094672,1094954-1094977,1095867-1095891,
1096014-1096304,1096391-1096470,1096953-1097052,
1097143-1097204,1097650-1097750,1097940-1098117,
1098298-1098924,1099014-1099100,1099804-1099905,
1100265-1100348,1100580-1100657
Length = 751
Score = 30.7 bits (66), Expect = 0.49
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +3
Query: 207 CLSKSPNKHNRLFMKASPCLMVCQRTL 287
C KS NKH +LF+ A CL+ +RTL
Sbjct: 553 CHKKSKNKH-KLFLNAKACLLSLKRTL 578
>10_08_0081 + 14710478-14710822
Length = 114
Score = 28.3 bits (60), Expect = 2.6
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = -3
Query: 226 LGDFERQSWSDSSATVSRYDTTGSDFLIGMQAWSS-SRSLRQISRWSSPAPAT 71
+ R SWSD V+R T+ + + W+ R +R S WSS AP T
Sbjct: 1 MSHLRRLSWSDQ--VVARQPTSEEEDVDAGGRWTEVRRKVRPHSWWSSNAPTT 51
>02_02_0340 + 9135846-9138377
Length = 843
Score = 27.9 bits (59), Expect = 3.5
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -3
Query: 166 TTGSDFLIGMQAWSSSRSLRQISRWSSPAPATMCS 62
TTGSD L G+Q + R+L I+ P +CS
Sbjct: 801 TTGSDVLDGLQPHYNLRALGIINHGGPTGPGWLCS 835
>05_07_0152 +
28044733-28045032,28045131-28045220,28045770-28045829,
28045912-28045977,28046161-28046226,28046330-28046405,
28046721-28046785,28046879-28046971,28047302-28047322,
28047600-28047692,28047939-28047998,28048157-28048222,
28048314-28048373,28048498-28048612,28048738-28048850
Length = 447
Score = 27.5 bits (58), Expect = 4.6
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
Frame = -3
Query: 373 GFGNIVFVLFCKIPSASLEVIAGIYATLINVLWQTIRHGLAFMNRRLCLLGDFERQSWSD 194
G G I +++ +I S++ +AG +ATL N W T G+ M L L SWS
Sbjct: 361 GMGAIPWIIMSEILPVSIKSLAGSFATLAN--WLT-SFGIT-MTANLML-------SWSA 409
Query: 193 SSATVSRYDTTGSDFLIGMQAW---SSSRSLRQISRWS 89
VS Y + L+ + W + R+L +I +WS
Sbjct: 410 GGTFVS-YMVVSAFTLVFVILWVPETKGRTLEEI-QWS 445
>02_05_0921 +
32739495-32739696,32739815-32740002,32740132-32740330,
32740426-32740604,32740760-32740910,32741165-32741298,
32741436-32741615
Length = 410
Score = 27.1 bits (57), Expect = 6.0
Identities = 15/41 (36%), Positives = 29/41 (70%), Gaps = 2/41 (4%)
Frame = -2
Query: 260 WA-SLHEQTVVLVGRL*ETELVRFLSYGLTVRHD-RVRLLD 144
W+ +++E V LVG+ +++++ L+Y L ++HD RVR +D
Sbjct: 298 WSGTVYENAVTLVGQCAPSDMLQKLTY-LAMKHDPRVRRVD 337
>02_04_0640 -
24664841-24664855,24664895-24664978,24665232-24665319,
24665457-24667318
Length = 682
Score = 27.1 bits (57), Expect = 6.0
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -3
Query: 238 RLCLLGDFERQSWSDSSATVSRYDTTGSDFLI-GMQAWSSSRS 113
RLC+ D E + D A+ RY+ +G +L+ G+ + S R+
Sbjct: 524 RLCISLDAELKEMQDRMASRQRYEASGRAYLLSGLSSHSWQRA 566
>09_02_0409 -
8656136-8656318,8656469-8656609,8658608-8658756,
8658830-8658987,8659326-8659409,8659654-8659787,
8661255-8661389,8662159-8662551
Length = 458
Score = 26.6 bits (56), Expect = 8.0
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +3
Query: 141 PIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKASPCLMVCQRTLMRV 296
P KKS P ++ A+ S CL SP K RL + S L +L R+
Sbjct: 288 PTKKSRPKP---QSFAKTSPLTCLKDSPRKGERLTLSPSGTLAAITDSLGRI 336
>08_01_0314 + 2777971-2778607,2778809-2778885,2778964-2779011
Length = 253
Score = 26.6 bits (56), Expect = 8.0
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = +3
Query: 99 EICLKDLEEDHACIPIKKSDPVVSYRETVAEESD 200
E+CL+D++ +P P++ + E+SD
Sbjct: 174 ELCLQDVDVGGVFVPCSSDHPIIHLADLPPEQSD 207
>06_01_0916 +
7058991-7059050,7060057-7061235,7061778-7063481,
7063557-7064432,7064457-7064660,7065039-7065143,
7065407-7065496,7066066-7066176,7066349-7066780
Length = 1586
Score = 26.6 bits (56), Expect = 8.0
Identities = 20/76 (26%), Positives = 30/76 (39%), Gaps = 3/76 (3%)
Frame = +3
Query: 48 NEESGEHIVAGAGELHLEICLKDLE---EDHACIPIKKSDPVVSYRETVAEESDQLCLSK 218
N S +HI G + C + E E ++C I ++ PV+ E + L
Sbjct: 201 NSSSQKHIHIGDATEFINECKDESELKTEPNSCKTIVETSPVIIQGAETPTEDESKVLDI 260
Query: 219 SPNKHNRLFMKASPCL 266
NRL + SP L
Sbjct: 261 CEITDNRLDVSGSPSL 276
>05_07_0151 +
28038178-28038480,28038578-28038667,28039130-28039189,
28039274-28039339,28039562-28039627,28039719-28039794,
28039972-28040036,28040115-28040192,28040362-28040442,
28040526-28040610,28040702-28040748,28040969-28041028,
28041179-28041244,28041327-28041386,28041524-28041638,
28041733-28041845
Length = 476
Score = 26.6 bits (56), Expect = 8.0
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -3
Query: 373 GFGNIVFVLFCKIPSASLEVIAGIYATLINVL 278
G G I +V+ +I S++ + G +ATL N+L
Sbjct: 390 GMGAIPWVMMSEILPVSIKSLGGSFATLANML 421
>05_07_0054 + 27368832-27369287
Length = 151
Score = 26.6 bits (56), Expect = 8.0
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 306 PAMTSRLALGILQKSTNTMLPKPVRFGALAPRVPAP 413
P+ +S+ + L + P P RFGA P PAP
Sbjct: 44 PSSSSQASASALFQGAPARRPPPPRFGADGPLRPAP 79
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,234,396
Number of Sequences: 37544
Number of extensions: 256708
Number of successful extensions: 816
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 785
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 812
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 754585524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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