Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30147
(417 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 164 3e-41
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 164 3e-41
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 79 2e-15
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 79 2e-15
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 51 4e-07
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 51 4e-07
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 49 7e-07
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 34 0.036
U00047-4|AAA50690.1| 825|Caenorhabditis elegans Hypothetical pr... 29 1.0
AF209707-1|AAF28335.1| 522|Caenorhabditis elegans phosphoinosit... 28 3.1
AC006708-6|AAF60427.2| 522|Caenorhabditis elegans Phosphoinosit... 28 3.1
Z69788-7|CAM33502.1| 132|Caenorhabditis elegans Hypothetical pr... 27 4.1
U50193-10|AAP68919.1| 1098|Caenorhabditis elegans Hypothetical p... 27 4.1
U50193-9|AAA91253.2| 1332|Caenorhabditis elegans Hypothetical pr... 27 4.1
U13644-9|AAB52680.3| 492|Caenorhabditis elegans Cell death abno... 27 4.1
AF061513-1|AAC24362.1| 492|Caenorhabditis elegans candidate ada... 27 4.1
Z75954-7|CAB00106.2| 492|Caenorhabditis elegans Hypothetical pr... 27 5.5
Z81074-8|CAB03043.1| 413|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z78416-5|CAB01681.1| 1137|Caenorhabditis elegans Hypothetical pr... 27 7.2
AF067936-5|AAC19211.1| 430|Caenorhabditis elegans Hypothetical ... 26 9.5
AF067936-4|AAC19210.1| 903|Caenorhabditis elegans Hypothetical ... 26 9.5
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 164 bits (398), Expect = 3e-41
Identities = 75/86 (87%), Positives = 79/86 (91%)
Frame = +3
Query: 3 GLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRET 182
GLKRLAKSDPMVQCI EESGEHI+AGAGELHLEICLKDLEEDHACIP+KKSDPVVSYRET
Sbjct: 517 GLKRLAKSDPMVQCIFEESGEHIIAGAGELHLEICLKDLEEDHACIPLKKSDPVVSYRET 576
Query: 183 VAEESDQLCLSKSPNKHNRLFMKASP 260
V ES+Q+CLSKSPNKHNRL A P
Sbjct: 577 VQSESNQICLSKSPNKHNRLHCTAQP 602
Score = 99 bits (238), Expect = 6e-22
Identities = 41/53 (77%), Positives = 47/53 (88%)
Frame = +2
Query: 257 PMPDGLPEDIDEGRVNSRDDFKTRARYLTEKYEYDVTEARKIWCFGPEGTGPN 415
PMPDGL +DI+ G VN+RD+FK RA+ L EKYEYDVTEARKIWCFGP+GTGPN
Sbjct: 602 PMPDGLADDIEGGTVNARDEFKARAKILAEKYEYDVTEARKIWCFGPDGTGPN 654
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 164 bits (398), Expect = 3e-41
Identities = 75/86 (87%), Positives = 79/86 (91%)
Frame = +3
Query: 3 GLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRET 182
GLKRLAKSDPMVQCI EESGEHI+AGAGELHLEICLKDLEEDHACIP+KKSDPVVSYRET
Sbjct: 517 GLKRLAKSDPMVQCIFEESGEHIIAGAGELHLEICLKDLEEDHACIPLKKSDPVVSYRET 576
Query: 183 VAEESDQLCLSKSPNKHNRLFMKASP 260
V ES+Q+CLSKSPNKHNRL A P
Sbjct: 577 VQSESNQICLSKSPNKHNRLHCTAQP 602
Score = 94.3 bits (224), Expect = 3e-20
Identities = 39/53 (73%), Positives = 46/53 (86%)
Frame = +2
Query: 257 PMPDGLPEDIDEGRVNSRDDFKTRARYLTEKYEYDVTEARKIWCFGPEGTGPN 415
PMPDGL +DI+ G V++RD+FK RA+Y EKYEY VTEARKIWCFGP+GTGPN
Sbjct: 602 PMPDGLADDIEGGTVSARDEFKARAKYPGEKYEYAVTEARKIWCFGPDGTGPN 654
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 78.6 bits (185), Expect = 2e-15
Identities = 35/86 (40%), Positives = 57/86 (66%)
Frame = +3
Query: 3 GLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRET 182
GL+++ KS P++ EESGEH++ G GE +++ + D+ + + I IK +DPVV++ ET
Sbjct: 610 GLRKVNKSYPLLTTRVEESGEHVLLGTGEFYMDCVMHDMRKVFSEIDIKVADPVVTFNET 669
Query: 183 VAEESDQLCLSKSPNKHNRLFMKASP 260
V E S C +++PNK N++ M A P
Sbjct: 670 VIETSTLKCFAETPNKKNKITMMAEP 695
Score = 44.4 bits (100), Expect = 3e-05
Identities = 20/53 (37%), Positives = 28/53 (52%)
Frame = +2
Query: 257 PMPDGLPEDIDEGRVNSRDDFKTRARYLTEKYEYDVTEARKIWCFGPEGTGPN 415
P+ L EDI+ V + + + KY +D+ AR IW FGP+ TGPN
Sbjct: 695 PLEKQLDEDIENEVVQIGWNRRRLGEFFQTKYNWDLLAARSIWAFGPDTTGPN 747
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 78.6 bits (185), Expect = 2e-15
Identities = 35/86 (40%), Positives = 57/86 (66%)
Frame = +3
Query: 3 GLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRET 182
GL+++ KS P++ EESGEH++ G GE +++ + D+ + + I IK +DPVV++ ET
Sbjct: 485 GLRKVNKSYPLLTTRVEESGEHVLLGTGEFYMDCVMHDMRKVFSEIDIKVADPVVTFNET 544
Query: 183 VAEESDQLCLSKSPNKHNRLFMKASP 260
V E S C +++PNK N++ M A P
Sbjct: 545 VIETSTLKCFAETPNKKNKITMMAEP 570
Score = 40.3 bits (90), Expect = 5e-04
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = +2
Query: 257 PMPDGLPEDIDEGRVNSRDDFKTRARYLTEKYEYDVTEARKIWCFGPEGTGPN 415
P+ L EDI+ V + + + KY +D+ AR IW FG + TGPN
Sbjct: 570 PLEKQLDEDIENEVVQIGWNRRRLGEFFQTKYNWDLLAARSIWAFGLDTTGPN 622
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 50.8 bits (116), Expect = 4e-07
Identities = 26/64 (40%), Positives = 40/64 (62%)
Frame = +3
Query: 6 LKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETV 185
LK LA D ++ + E+GE + AGE+HL+ C+KDL D + + S+P+V + ETV
Sbjct: 497 LKLLALLDTSLKVMELENGELAMVTAGEVHLQKCIKDL-NDLGLVDLDVSEPIVPFMETV 555
Query: 186 AEES 197
E+S
Sbjct: 556 IEDS 559
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 50.8 bits (116), Expect = 4e-07
Identities = 26/64 (40%), Positives = 40/64 (62%)
Frame = +3
Query: 6 LKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETV 185
LK LA D ++ + E+GE + AGE+HL+ C+KDL D + + S+P+V + ETV
Sbjct: 497 LKLLALLDTSLKVMELENGELAMVTAGEVHLQKCIKDL-NDLGLVDLDVSEPIVPFMETV 555
Query: 186 AEES 197
E+S
Sbjct: 556 IEDS 559
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 48.8 bits (111), Expect(2) = 7e-07
Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Frame = +3
Query: 6 LKRLAKSDPMVQC-INEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRE 179
L R K DP + N+E+ E IV+G GELHLEI + ++ ++ C P++ P V+YRE
Sbjct: 467 LTRFTKEDPTFRREYNQEAKETIVSGMGELHLEIYAQRMKSEYNC-PVELGKPTVAYRE 524
Score = 20.6 bits (41), Expect(2) = 7e-07
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3
Query: 156 DPVVSYRETVAEESDQ 203
DP+ S R TV E SD+
Sbjct: 554 DPLPSDRNTVVEFSDE 569
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 34.3 bits (75), Expect = 0.036
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +3
Query: 6 LKRLAKSDPMVQC-INEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRET 182
L+ L + DP ++ + ++G+ IV GELHLE +KD + + + + V+YRE
Sbjct: 414 LEELTREDPSMKIRFDRDTGQTIVETQGELHLE-AIKDRLKRNYKLDVFIGKLQVAYREM 472
Query: 183 VAEE 194
+ EE
Sbjct: 473 LTEE 476
>U00047-4|AAA50690.1| 825|Caenorhabditis elegans Hypothetical
protein ZK418.6 protein.
Length = 825
Score = 29.5 bits (63), Expect = 1.0
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = -3
Query: 379 LTGFGNIVFVLFCKIPSASLEVIAGIYATLINVLWQTIRHGLAFM 245
+ GF + ++F I ++ I GIY L +L+ + H +++M
Sbjct: 129 VNGFNYVSAMIFIIIGGSTFMSITGIYIVLTVILYMAVAHHISYM 173
>AF209707-1|AAF28335.1| 522|Caenorhabditis elegans phosphoinositide
3-kinase adaptersubunit protein.
Length = 522
Score = 27.9 bits (59), Expect = 3.1
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -3
Query: 94 WSSPAPATMCSPDSSLIHCT 35
W SP+P T S DS L+H T
Sbjct: 495 WDSPSPDTPSSSDSRLVHPT 514
>AC006708-6|AAF60427.2| 522|Caenorhabditis elegans Phosphoinositide
kinase adaptersubunit protein 1 protein.
Length = 522
Score = 27.9 bits (59), Expect = 3.1
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -3
Query: 94 WSSPAPATMCSPDSSLIHCT 35
W SP+P T S DS L+H T
Sbjct: 495 WDSPSPDTPSSSDSRLVHPT 514
>Z69788-7|CAM33502.1| 132|Caenorhabditis elegans Hypothetical
protein F09A5.9 protein.
Length = 132
Score = 27.5 bits (58), Expect = 4.1
Identities = 17/64 (26%), Positives = 29/64 (45%)
Frame = +3
Query: 15 LAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEE 194
L SD ++ E GEH GE+ + L+ H C +++D ++ E A+
Sbjct: 52 LFDSDDVLDETTVEYGEHFTLDGGEIEIFSTEPYLQIVHKCFGTERTD-IIDLSEFEADS 110
Query: 195 SDQL 206
+D L
Sbjct: 111 NDIL 114
>U50193-10|AAP68919.1| 1098|Caenorhabditis elegans Hypothetical
protein ZK328.7b protein.
Length = 1098
Score = 27.5 bits (58), Expect = 4.1
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 3/65 (4%)
Frame = -3
Query: 370 FGNIVFVL---FCKIPSASLEVIAGIYATLINVLWQTIRHGLAFMNRRLCLLGDFERQSW 200
FG + V I +L ++ G+ TL+ + IRH F+ LG W
Sbjct: 41 FGTAILVCDGRLATIKDPALAILKGVCLTLLGKIPDAIRHLETFVTDNDVALGALHALKW 100
Query: 199 SDSSA 185
+ +SA
Sbjct: 101 AHASA 105
>U50193-9|AAA91253.2| 1332|Caenorhabditis elegans Hypothetical
protein ZK328.7a protein.
Length = 1332
Score = 27.5 bits (58), Expect = 4.1
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 3/65 (4%)
Frame = -3
Query: 370 FGNIVFVL---FCKIPSASLEVIAGIYATLINVLWQTIRHGLAFMNRRLCLLGDFERQSW 200
FG + V I +L ++ G+ TL+ + IRH F+ LG W
Sbjct: 41 FGTAILVCDGRLATIKDPALAILKGVCLTLLGKIPDAIRHLETFVTDNDVALGALHALKW 100
Query: 199 SDSSA 185
+ +SA
Sbjct: 101 AHASA 105
>U13644-9|AAB52680.3| 492|Caenorhabditis elegans Cell death
abnormality protein 6 protein.
Length = 492
Score = 27.5 bits (58), Expect = 4.1
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = -3
Query: 196 DSSATVSRYDTTGSDFLIGMQAWSSSRSLRQISRWSSPAPATMCSPDSSLI 44
+ +T + Y+ G+DFL G+Q + +S A A + P+SS +
Sbjct: 379 EKKSTAAEYNPFGADFLSGIQNGKEAPPSASAELLASEAIARLPKPESSSV 429
>AF061513-1|AAC24362.1| 492|Caenorhabditis elegans candidate
adaptor protein CED-6 protein.
Length = 492
Score = 27.5 bits (58), Expect = 4.1
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = -3
Query: 196 DSSATVSRYDTTGSDFLIGMQAWSSSRSLRQISRWSSPAPATMCSPDSSLI 44
+ +T + Y+ G+DFL G+Q + +S A A + P+SS +
Sbjct: 379 EKKSTAAEYNPFGADFLSGIQNGKEAPPSASAELLASEAIARLPKPESSSV 429
>Z75954-7|CAB00106.2| 492|Caenorhabditis elegans Hypothetical
protein F58H1.3a protein.
Length = 492
Score = 27.1 bits (57), Expect = 5.5
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -2
Query: 359 RIRTFL*DTERES*SHRGNLRDPHQCPLADHQAWASLH 246
+I+ FL ERE+ R N+R HQ D + WA ++
Sbjct: 287 KIKNFLLAEEREN-FDRDNIRKAHQKDNVDEKEWALIY 323
>Z81074-8|CAB03043.1| 413|Caenorhabditis elegans Hypothetical
protein F32B6.9 protein.
Length = 413
Score = 26.6 bits (56), Expect = 7.2
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +3
Query: 108 LKDLEEDHACIPIKKSDPVVSY 173
+KDLE H C+ +KK +S+
Sbjct: 392 IKDLESHHGCVSLKKDKKHISW 413
>Z78416-5|CAB01681.1| 1137|Caenorhabditis elegans Hypothetical
protein C23H4.6 protein.
Length = 1137
Score = 26.6 bits (56), Expect = 7.2
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +3
Query: 21 KSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIK 149
K+D M QC N E ++I GEL ++ + LEE+ CI K
Sbjct: 743 KAD-MTQCANTEQVDNINDALGELQEKLSI--LEEEAYCIQDK 782
>AF067936-5|AAC19211.1| 430|Caenorhabditis elegans Hypothetical
protein C24G6.2b protein.
Length = 430
Score = 26.2 bits (55), Expect = 9.5
Identities = 15/74 (20%), Positives = 35/74 (47%)
Frame = +3
Query: 27 DPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQL 206
D M+QC N + + I + L L+D+ ED++ + + + + + +++D +
Sbjct: 345 DVMMQCWNADPDDRIEFSDVRMQLATQLEDITEDYSYLKLDAAKDYYNVQYGDEKKTDVV 404
Query: 207 CLSKSPNKHNRLFM 248
+ K ++L M
Sbjct: 405 IIPDEIIKPSKLIM 418
>AF067936-4|AAC19210.1| 903|Caenorhabditis elegans Hypothetical
protein C24G6.2a protein.
Length = 903
Score = 26.2 bits (55), Expect = 9.5
Identities = 15/74 (20%), Positives = 35/74 (47%)
Frame = +3
Query: 27 DPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQL 206
D M+QC N + + I + L L+D+ ED++ + + + + + +++D +
Sbjct: 818 DVMMQCWNADPDDRIEFSDVRMQLATQLEDITEDYSYLKLDAAKDYYNVQYGDEKKTDVV 877
Query: 207 CLSKSPNKHNRLFM 248
+ K ++L M
Sbjct: 878 IIPDEIIKPSKLIM 891
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,825,063
Number of Sequences: 27780
Number of extensions: 201436
Number of successful extensions: 665
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 663
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 683806592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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