Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30144
         (682 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00001CD590 Cluster: PREDICTED: similar to Mortality ...    33   4.9  
UniRef50_Q4S2A4 Cluster: Chromosome undetermined SCAF14764, whol...    33   6.4  
UniRef50_A7DAV8 Cluster: Putative uncharacterized protein precur...    33   8.5  
UniRef50_Q22SF7 Cluster: Putative uncharacterized protein; n=1; ...    33   8.5  

>UniRef50_UPI00001CD590 Cluster: PREDICTED: similar to Mortality
            factor 4-like protein 2 (MORF-related gene X protein)
            (Transcription factor-like protein MRGX) (MSL3-2
            protein); n=9; Euarchontoglires|Rep: PREDICTED: similar
            to Mortality factor 4-like protein 2 (MORF-related gene X
            protein) (Transcription factor-like protein MRGX) (MSL3-2
            protein) - Rattus norvegicus
          Length = 2298

 Score = 33.5 bits (73), Expect = 4.9
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +2

Query: 392  KLCPTIRESIPKARXPKRGKNTTTRSGSKSVSRATEQFFRTPKFRSSCKG 541
            K CP++++S   +R P  GK+   R G  + S  TE+       RS+ +G
Sbjct: 1247 KKCPSVKDSRSTSRGPSAGKDRPGRRGRSNKSSPTEESRSVEGSRSTSRG 1296


>UniRef50_Q4S2A4 Cluster: Chromosome undetermined SCAF14764, whole
           genome shotgun sequence; n=2; Tetraodontidae|Rep:
           Chromosome undetermined SCAF14764, whole genome shotgun
           sequence - Tetraodon nigroviridis (Green puffer)
          Length = 490

 Score = 33.1 bits (72), Expect = 6.4
 Identities = 31/107 (28%), Positives = 41/107 (38%), Gaps = 2/107 (1%)
 Frame = +2

Query: 173 RKRKCKE--ISSTQHGLHPPTKPTRVSRNPVPRPKSV*QLC*LSCCAHWNVPSYS*SNNS 346
           +K+K  E  +SS +    PP KPTR  R P P          L+     +  S S S+ +
Sbjct: 282 KKKKLAEDDVSSEEEAKCPPPKPTRYGRMPKPTKP-------LNYPTKDDTHSSSSSSEA 334

Query: 347 KPGQLWWVSNPRTVSKLCPTIRESIPKARXPKRGKNTTTRSGSKSVS 487
                   S PR  SK     +   P  + PKR K  T R      S
Sbjct: 335 TSASATGPSAPRPKSKCSAKRKGKTPSVQEPKRPKLITLRFSQSEYS 381


>UniRef50_A7DAV8 Cluster: Putative uncharacterized protein
           precursor; n=1; Methylobacterium extorquens PA1|Rep:
           Putative uncharacterized protein precursor -
           Methylobacterium extorquens PA1
          Length = 160

 Score = 32.7 bits (71), Expect = 8.5
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = +2

Query: 131 KATKTSQRKPIKLNRKRKCKEISSTQHGLHPPTKPTRVSR 250
           ++ +T Q  P ++ R R C  I S  HG+HPP +   VSR
Sbjct: 65  RSEQTVQVGPGRIGRLR-CPGIESVHHGIHPPVEIPSVSR 103


>UniRef50_Q22SF7 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 2420

 Score = 32.7 bits (71), Expect = 8.5
 Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = +1

Query: 277 ITIMLIILLCP-LERTQLQLVQQFQTRAAMVGLKPKDSFKTLPNNQGINSK 426
           IT + + ++CP LE    Q V Q+ +   + G  P+D +K L N   +N +
Sbjct: 147 ITQLTLCIICPPLENKFTQFVGQYSSIKMITGFYPQDIYKLLINENNMNDQ 197


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 681,125,846
Number of Sequences: 1657284
Number of extensions: 13813705
Number of successful extensions: 35944
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 34567
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35933
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52892566912
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)