Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30144
         (682 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.43 
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    23   3.1  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         23   3.1  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    23   3.1  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   5.3  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   5.3  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    21   7.1  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   9.3  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   9.3  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 25.4 bits (53), Expect = 0.43
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +1

Query: 400  PNNQGINSKGPGP 438
            P N G+N+K PGP
Sbjct: 1652 PENHGLNAKAPGP 1664



 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +2

Query: 167 LNRKRKCKEISSTQHGLHPPTKPTRVSRN 253
           +NR  +  E+   Q   +PPTKP    R+
Sbjct: 534 INRHLRGNELLPMQQSQNPPTKPYGTCRS 562


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 12/25 (48%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
 Frame = +2

Query: 440 KRGKNTTTRSGSK-SVSRATEQFFR 511
           K+G+NT TR+ S+ SV+   E+ FR
Sbjct: 535 KQGQNTITRASSQSSVTIPFERTFR 559


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 10/38 (26%), Positives = 20/38 (52%)
 Frame = +2

Query: 413 ESIPKARXPKRGKNTTTRSGSKSVSRATEQFFRTPKFR 526
           +S+P+     RG++  +RS  +  +   +Q  R P +R
Sbjct: 197 KSLPRQYSQSRGRHNQSRSKRQPKTGREDQTRRNPYYR 234


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +1

Query: 397 LPNNQGINSKGPGPQKGKKH 456
           +P   G   +GPGP + ++H
Sbjct: 321 VPQLAGGGRRGPGPARSRRH 340


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 12/37 (32%), Positives = 16/37 (43%)
 Frame = +1

Query: 373 KPKDSFKTLPNNQGINSKGPGPQKGKKHNYQVRLKIS 483
           KP  SFK   ++     + P P  G K+     L IS
Sbjct: 90  KPTTSFKLKDSSSDSEDERPRPGGGTKYQTFSNLNIS 126


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 14/53 (26%), Positives = 24/53 (45%)
 Frame = +2

Query: 371 SNPRTVSKLCPTIRESIPKARXPKRGKNTTTRSGSKSVSRATEQFFRTPKFRS 529
           SN    S L   I+E++P  R   RG++     G++   +  +  +    FRS
Sbjct: 438 SNKPNSSDLNMLIKETMPLPRKLVRGQDVWLGKGAEQTRQILKCMWCGQSFRS 490


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 16/64 (25%), Positives = 28/64 (43%)
 Frame = +1

Query: 379 KDSFKTLPNNQGINSKGPGPQKGKKHNYQVRLKISFKGNRTIFQNPKIQVQLQGPEPVME 558
           ++S  TL      + K P P KG+K    +  K++     T F N + +++ +       
Sbjct: 93  RESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEP 152

Query: 559 *NKT 570
            NKT
Sbjct: 153 KNKT 156


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 5/10 (50%), Positives = 9/10 (90%)
 Frame = +2

Query: 365 WVSNPRTVSK 394
           W+ NPRT+++
Sbjct: 464 WIQNPRTITE 473


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +2

Query: 74  HERFSTFRKK*SVGSLTWSKAT 139
           H+R++T+    S G L W   T
Sbjct: 668 HQRYTTYSDVWSFGVLLWEIVT 689


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,373
Number of Sequences: 336
Number of extensions: 3498
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)