Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30144
         (682 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    28   0.24 
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    26   0.96 
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            25   2.9  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    23   6.7  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    23   8.9  

>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 28.3 bits (60), Expect = 0.24
 Identities = 16/35 (45%), Positives = 18/35 (51%)
 Frame = +1

Query: 445 GKKHNYQVRLKISFKGNRTIFQNPKIQVQLQGPEP 549
           GK  NY +R K     NR  F  P +   LQGPEP
Sbjct: 685 GKTGNYNIRDKFKRFDNR--FIRPLLIKNLQGPEP 717


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 26.2 bits (55), Expect = 0.96
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = -3

Query: 155 CVGLFLWLWTMSMTPPIIFSGMWRTFRGSNSAVV 54
           CV  +++L+   ++P I F G+  T  G+N A +
Sbjct: 524 CVASWIFLYFACLSPIITFGGLLGTATGNNIAAM 557


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -1

Query: 346  GIVGLTVAGYVPVGTAG 296
            G+VG  + G+ PVG AG
Sbjct: 2727 GLVGGLIGGFAPVGIAG 2743


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +2

Query: 218 HPPTKPTRVSRNPVPRPKSV 277
           H P  P  +SRNP   P S+
Sbjct: 374 HEPQTPRDISRNPDVEPVSI 393


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 537 RARTSYGVKQNLTYVPKG 590
           RA+   G K N+TY P G
Sbjct: 752 RAKPKIGSKDNITYKPGG 769


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 718,104
Number of Sequences: 2352
Number of extensions: 14205
Number of successful extensions: 41
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68577420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)