Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30144
         (682 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    25   0.67 
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    24   1.2  
X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor pro...    24   1.2  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    22   4.7  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   6.2  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       21   8.2  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 25.0 bits (52), Expect = 0.67
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 15  VLACHTFSRTNQHNDSAVGTT 77
           V  C+ F +TN   DS+ GTT
Sbjct: 716 VTTCNMFRKTNLSGDSSSGTT 736


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +2

Query: 215 LHPPTKPTRVSRNPVP 262
           L PPT+PTR+ R   P
Sbjct: 22  LDPPTRPTRLRREAKP 37


>X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor
           protein.
          Length = 144

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +2

Query: 215 LHPPTKPTRVSRNPVP 262
           L PPT+PTR+ R   P
Sbjct: 23  LDPPTRPTRLRREAEP 38


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 215 LHPPTKPTRVSRNPVP 262
           L PPT+P R+ R   P
Sbjct: 23  LDPPTRPARLRREAKP 38


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 45  NQHNDSAVGTTKGSPH 92
           +QH +  +G T G PH
Sbjct: 336 HQHGNHTMGPTMGPPH 351


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 13/37 (35%), Positives = 16/37 (43%)
 Frame = -3

Query: 149 GLFLWLWTMSMTPPIIFSGMWRTFRGSNSAVVVLIST 39
           GLFL+  T S   PI++       R   SA    I T
Sbjct: 300 GLFLFACTNSCMNPIVYGAFNIRDRNKTSARPTTIET 336


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,431
Number of Sequences: 438
Number of extensions: 3872
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20708550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)