Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30143
(551 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0483 - 8804021-8804485 45 5e-05
03_02_0484 + 8805053-8805538 44 6e-05
03_02_0478 + 8775892-8776377 44 8e-05
01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457 44 1e-04
01_01_0229 - 1943473-1943922 43 1e-04
03_02_0485 - 8808139-8808618 43 2e-04
01_01_0231 + 1951047-1951499 43 2e-04
01_01_0227 + 1933247-1933699 41 6e-04
02_01_0222 + 1450233-1450766 37 0.012
11_02_0041 - 7669692-7670312 36 0.021
03_02_0345 + 7664564-7665277,7665672-7665921,7665996-7666015 35 0.038
02_02_0077 - 6586638-6587165 35 0.050
03_05_0543 - 25404630-25405408,25405461-25405605 34 0.087
06_01_1017 - 7951985-7952425 33 0.20
03_01_0151 + 1206555-1206998,1207112-1207543 31 0.81
11_01_0241 - 1858391-1859143,1859577-1859819 29 3.3
06_03_1490 + 30497980-30498102,30499034-30500156,30500914-305011... 29 3.3
02_05_0220 - 26885502-26885561,26885940-26886739,26887055-268874... 28 4.3
01_01_0568 - 4207812-4209587,4210056-4210291,4210647-4210793,421... 28 4.3
09_02_0496 - 9892242-9892499,9892956-9893045,9893046-9893094,989... 28 5.7
08_01_0539 + 4679392-4681282,4682060-4682104,4682403-4683560,468... 28 5.7
05_03_0001 - 7269231-7269436,7269536-7270100,7270600-7270821,727... 28 5.7
10_07_0141 + 13347648-13348331 27 7.5
03_02_0229 + 6594931-6595030,6595573-6595826,6595935-6596061,659... 27 7.5
01_06_1285 - 35995943-35996087,35996909-35997697,35997802-359978... 27 7.5
12_02_1280 - 27517683-27517871,27517955-27518029,27518155-275183... 27 10.0
12_02_0248 + 16413295-16414394,16416511-16416762,16416839-164170... 27 10.0
11_05_0004 - 18269416-18269473,18270319-18270509,18271061-182720... 27 10.0
11_01_0551 + 4361640-4363386,4363443-4363687 27 10.0
10_08_0374 - 17312430-17312513,17312794-17313029,17313081-173132... 27 10.0
>03_02_0483 - 8804021-8804485
Length = 154
Score = 44.8 bits (101), Expect = 5e-05
Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Frame = +2
Query: 257 EEISVKTADGYVI-VEGKH----EERQDEHGYISR---QFTRRYALPENCNPDTVESRLS 412
EE+ V+ DG V+ + G+ EE+ D+ + R +F RR+ LPEN P+ +++ +
Sbjct: 70 EEVKVEVEDGNVLQISGERIKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPEQIKASM- 128
Query: 413 SDGVLTVIAPRTPAATKNERAVPIT 487
+GVLTV P+ + +++ IT
Sbjct: 129 ENGVLTVTVPKEEPKKPDVKSIQIT 153
>03_02_0484 + 8805053-8805538
Length = 161
Score = 44.4 bits (100), Expect = 6e-05
Identities = 26/85 (30%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Frame = +2
Query: 257 EEISVKTADGYVI-VEGKH----EERQDEHGYISR---QFTRRYALPENCNPDTVESRLS 412
EE+ V+ DG V+ + G+ EE+ D+ + R +F RR+ LPEN P+ +++ +
Sbjct: 77 EEVKVEVEDGNVLQISGERSKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPEQIKASM- 135
Query: 413 SDGVLTVIAPRTPAATKNERAVPIT 487
+GVLTV P+ + +++ +T
Sbjct: 136 ENGVLTVTVPKEEPKKPDVKSIQVT 160
>03_02_0478 + 8775892-8776377
Length = 161
Score = 44.0 bits (99), Expect = 8e-05
Identities = 25/85 (29%), Positives = 49/85 (57%), Gaps = 8/85 (9%)
Frame = +2
Query: 257 EEISVKTADGYVI-VEGKH----EERQDEHGYISR---QFTRRYALPENCNPDTVESRLS 412
EE+ V+ DG ++ + G+ EE+ D+ + R +F RR+ LP+N P+ +++ +
Sbjct: 77 EEVKVEVDDGNILQISGERNKEQEEKTDQWHRVERSSGKFLRRFRLPDNAKPEQIKASM- 135
Query: 413 SDGVLTVIAPRTPAATKNERAVPIT 487
+GVLTV P+ A + +++ I+
Sbjct: 136 ENGVLTVTVPKEEAKKPDVKSIQIS 160
>01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457
Length = 438
Score = 43.6 bits (98), Expect = 1e-04
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Frame = +2
Query: 257 EEISVKTADGYVIV-----EGKHEERQDEHGYISR---QFTRRYALPENCNPDTVESRLS 412
EE+ V+ +G V+V + E++ D+ + R QF RR+ LPEN D V++ L
Sbjct: 66 EEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKAGL- 124
Query: 413 SDGVLTVIAPRTPAATKNERAVPIT 487
+GVLTV P+ +A+ I+
Sbjct: 125 ENGVLTVTVPKAEVKKPEVKAIEIS 149
>01_01_0229 - 1943473-1943922
Length = 149
Score = 43.2 bits (97), Expect = 1e-04
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Frame = +2
Query: 257 EEISVKTADGYVIV-----EGKHEERQDEHGYISR---QFTRRYALPENCNPDTVESRLS 412
EE+ V+ +G V+V + E++ D+ + R QF RR+ LPEN D V++ +
Sbjct: 65 EEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKASM- 123
Query: 413 SDGVLTVIAPRTPAATKNERAVPIT 487
+GVLTV P+ +A+ I+
Sbjct: 124 ENGVLTVTVPKAEVKKPEVKAIEIS 148
>03_02_0485 - 8808139-8808618
Length = 159
Score = 42.7 bits (96), Expect = 2e-04
Identities = 25/85 (29%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Frame = +2
Query: 257 EEISVKTADGYVI-VEGKH----EERQDEHGYISR---QFTRRYALPENCNPDTVESRLS 412
EE+ V+ DG ++ + G+ EE+ D+ + R +F RR+ LPEN P+ +++ +
Sbjct: 75 EEVKVEVDDGNILQISGERSREQEEKSDKWHRVERSSGKFLRRFRLPENTKPEQIKASM- 133
Query: 413 SDGVLTVIAPRTPAATKNERAVPIT 487
+GVLTV P+ + +++ I+
Sbjct: 134 ENGVLTVTVPKEEPKKPDVKSIQIS 158
>01_01_0231 + 1951047-1951499
Length = 150
Score = 42.7 bits (96), Expect = 2e-04
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Frame = +2
Query: 257 EEISVKTADGYVIV-----EGKHEERQDEHGYISR---QFTRRYALPENCNPDTVESRLS 412
EE+ V+ +G V+V + E++ D+ + R QF RR+ LPEN D V++ +
Sbjct: 66 EEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKAGM- 124
Query: 413 SDGVLTVIAPRTPAATKNERAVPIT 487
+GVLTV P+ +A+ I+
Sbjct: 125 ENGVLTVTVPKAEVKKPEVKAIEIS 149
>01_01_0227 + 1933247-1933699
Length = 150
Score = 41.1 bits (92), Expect = 6e-04
Identities = 22/64 (34%), Positives = 34/64 (53%)
Frame = +2
Query: 296 VEGKHEERQDEHGYISRQFTRRYALPENCNPDTVESRLSSDGVLTVIAPRTPAATKNERA 475
V+GK++ER S +F RR+ LP D V + + +GVLTV P+ +A
Sbjct: 87 VDGKNDERWHHVERSSGKFQRRFRLPRGARVDQVSASM-DNGVLTVTVPKEETKKPQLKA 145
Query: 476 VPIT 487
+PI+
Sbjct: 146 IPIS 149
>02_01_0222 + 1450233-1450766
Length = 177
Score = 36.7 bits (81), Expect = 0.012
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 8/85 (9%)
Frame = +2
Query: 257 EEISVKTADGYVI-VEGKHEERQDEHGY-------ISRQFTRRYALPENCNPDTVESRLS 412
EE+ V+ + V+ + G+ +E G S +F R LP N N D V + L
Sbjct: 93 EEVRVEVEEEKVLRISGQRARAAEEKGERWHRVERSSERFVRTVRLPPNANTDGVHAALD 152
Query: 413 SDGVLTVIAPRTPAATKNERAVPIT 487
+ GVLT+ P+ + R +PIT
Sbjct: 153 N-GVLTITIPKDNDRKPHARIIPIT 176
>11_02_0041 - 7669692-7670312
Length = 206
Score = 35.9 bits (79), Expect = 0.021
Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +2
Query: 347 QFTRRYALPENCNPDTVESRLSSDGVLTVIAPRTPAATKNE-RAVPITQTGPGPEE 511
+F RR+ +P + V +RL DGVLTV P+ P E R V I G G E
Sbjct: 141 RFWRRFRMPPGADVGRVAARLD-DGVLTVTVPKVPGHRGREPRVVAIDGAGAGDME 195
>03_02_0345 + 7664564-7665277,7665672-7665921,7665996-7666015
Length = 327
Score = 35.1 bits (77), Expect = 0.038
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 10/82 (12%)
Frame = +2
Query: 248 LFAEEISVKTADGYVIVEGKHEERQDE------HGYISRQ----FTRRYALPENCNPDTV 397
L EE+ V D +++ G+H++ + E G+ + + R ALP+ C+ V
Sbjct: 153 LSREEVKVMVEDDALVIRGEHKKEEGEGAEGSGDGWWKERSVSSYDMRLALPDECDKSKV 212
Query: 398 ESRLSSDGVLTVIAPRTPAATK 463
+ L +GVL V P+T K
Sbjct: 213 RAEL-KNGVLLVTVPKTEVERK 233
>02_02_0077 - 6586638-6587165
Length = 175
Score = 34.7 bits (76), Expect = 0.050
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +2
Query: 347 QFTRRYALPENCNPDTVESRLSSDGVLTV-IAPRTPAATKNERAVPITQTGPG 502
+F RR+ LPE+ + D V + DGVLTV + + P K R V + G G
Sbjct: 117 KFMRRFPLPESADLDGVRAEY-KDGVLTVTVDKKPPPEPKKPRVVEVKVAGAG 168
>03_05_0543 - 25404630-25405408,25405461-25405605
Length = 307
Score = 33.9 bits (74), Expect = 0.087
Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = +2
Query: 347 QFTRRYALPENCNPDTVESRLSSDGVLTVIAPRTPA-ATKNERAVPIT---QTGPGPEEI 514
+F + + LP +CN D + ++ ++ + + +TP+ T + P+T Q P PE
Sbjct: 80 RFQKDFQLPADCNVDGIRAKFENEALTITLPKKTPSPLTPSPTPSPVTPPPQQPPQPEPR 139
Query: 515 KEPTA 529
+ P A
Sbjct: 140 RPPAA 144
>06_01_1017 - 7951985-7952425
Length = 146
Score = 32.7 bits (71), Expect = 0.20
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Frame = +2
Query: 263 ISVKTADGYVIVEGKHEERQDEHGYISR----QFTRRYALPENCNPDTVESRLSSDGVLT 430
++V+ A + E + E +D +++ +F R ALP + + + + + GVLT
Sbjct: 65 LTVRGAAPHAAAEKEREREKDVVWHVAERGRPEFAREVALPAEVRVEQIRASVDN-GVLT 123
Query: 431 VIAPRTPAATKNERAVPI 484
V+ P+ PA + R PI
Sbjct: 124 VVVPKEPAPAR-PRTRPI 140
>03_01_0151 + 1206555-1206998,1207112-1207543
Length = 291
Score = 30.7 bits (66), Expect = 0.81
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +2
Query: 371 PENCNPDTVESRLSSDGVLTVIAPRTPAATKNERAVPITQTGPGPEEIKEPTAEAES 541
P + D +ES ++ V AP T A + +R P + P PE+ K+P EAE+
Sbjct: 59 PPVADLDLLESCVTQAAAPPVTAPATRAERRRKRPRPRPRAAPPPEKRKKP-EEAEN 114
>11_01_0241 - 1858391-1859143,1859577-1859819
Length = 331
Score = 28.7 bits (61), Expect = 3.3
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Frame = +2
Query: 407 LSSDGVLTV----IAPRTPAATKNERAVPITQTGPGPEEIKEPTAEAESHE 547
++ +G++ + ++PR AT NE T PGP+ ++E AEA ++
Sbjct: 120 ITDEGIMVICKVYLSPRAKEATANEEERQETNVVPGPKRLRE--AEATGYD 168
>06_03_1490 +
30497980-30498102,30499034-30500156,30500914-30501132,
30501228-30501454,30501810-30501884,30502250-30502321,
30502765-30502863,30502975-30503046,30503131-30503245,
30503455-30503523,30503625-30503952,30504320-30504437,
30504522-30505448
Length = 1188
Score = 28.7 bits (61), Expect = 3.3
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +1
Query: 49 DTNRTAFAIRTSDWRLLRTIS*RPSSRQRCPEITTVRGSRWRSPIETSVPPSPRIRI 219
D NRT F R + LR ++ S R+ P+I VR + + P + P+PRI +
Sbjct: 47 DKNRTGFLGREDFYNALRLVTVAQSGRELTPDI--VRSALY-GPAAAKI-PAPRINV 99
>02_05_0220 - 26885502-26885561,26885940-26886739,26887055-26887421,
26887942-26888055,26888132-26888228,26889115-26889235,
26889306-26889390,26889494-26889643,26889871-26889987,
26890123-26890221,26890439-26890495,26890581-26890664,
26890759-26890828,26891015-26891169,26891557-26892095,
26892327-26892393,26892436-26892984,26893574-26893768,
26894485-26894569,26895822-26896441,26897154-26897486,
26897552-26897616,26897868-26897955,26898250-26898331,
26898720-26898796,26899152-26899256,26899496-26899630,
26900199-26900888,26901474-26902261,26902990-26904673
Length = 2825
Score = 28.3 bits (60), Expect = 4.3
Identities = 20/52 (38%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
Frame = +2
Query: 356 RRYALP--ENCNPDTVESRLSSDGVLTVIAPRTPAA-TKNERAVPITQTGPG 502
R Y LP ENCN + L SD + V+ PAA P T GPG
Sbjct: 2427 RSYVLPNPENCNV-PASAMLVSDDSIVVVGANVPAAHLALHHWQPNTSNGPG 2477
>01_01_0568 -
4207812-4209587,4210056-4210291,4210647-4210793,
4211857-4212145
Length = 815
Score = 28.3 bits (60), Expect = 4.3
Identities = 24/98 (24%), Positives = 42/98 (42%), Gaps = 2/98 (2%)
Frame = +2
Query: 236 RRSTLFAEE--ISVKTADGYVIVEGKHEERQDEHGYISRQFTRRYALPENCNPDTVESRL 409
R+ TL AE+ +S A+ I HE +D ISR T + + E L
Sbjct: 685 RKDTLEAEKKMLSKALAEQQKITTEAHENTEDAQNLISRLQTEKESFEMRARHLEEELAL 744
Query: 410 SSDGVLTVIAPRTPAATKNERAVPITQTGPGPEEIKEP 523
+ +L + R + +++++A + T PE + P
Sbjct: 745 AKGEILRL--RRQISTSRSQKAKTLPNTNASPEVSQAP 780
>09_02_0496 -
9892242-9892499,9892956-9893045,9893046-9893094,
9893330-9893557,9894095-9894261,9894312-9894395,
9894614-9894820,9894919-9895251,9895371-9895513,
9895607-9895723,9895824-9895980,9896054-9896157,
9896272-9896432,9896518-9896707,9896732-9896834,
9896950-9897231,9897327-9897649,9897750-9897786,
9898109-9898162,9898292-9898368,9898449-9898502,
9898738-9898822,9900289-9900426,9900592-9900603
Length = 1150
Score = 27.9 bits (59), Expect = 5.7
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = -2
Query: 535 SFRSGLLNLFRTGPGLSDGNSSLVLRGSRSPGSDHGQHTVRGQPR 401
SFR G+L G VL G ++ G HG TV G P+
Sbjct: 700 SFRPGVLTALMGISGAGKTTLLDVLAGRKTSGHIHGNITVSGYPK 744
>08_01_0539 +
4679392-4681282,4682060-4682104,4682403-4683560,
4683834-4684204,4684290-4684835,4684927-4685027,
4685117-4685933,4686025-4686213,4686313-4686384,
4686477-4686587,4686647-4686652,4686694-4686794,
4687714-4687813,4687891-4687986,4688157-4688273,
4688367-4688492,4688566-4688619,4688745-4688992,
4689087-4689195,4689284-4689583,4689799-4689963
Length = 2240
Score = 27.9 bits (59), Expect = 5.7
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 7/56 (12%)
Frame = +2
Query: 2 RMLK*SKNVSAAIHPGIPTEPPSRSGL-------RTGAYSGRSPDGRHHANDVQRL 148
R++K + I P + PPSRS R+ + G S +HH +D Q L
Sbjct: 811 RVVKDQSSSELRIKPKVADRPPSRSSRSHSIGTDRSSTHEGSSHSKKHHEHDSQSL 866
>05_03_0001 -
7269231-7269436,7269536-7270100,7270600-7270821,
7270913-7271155,7271227-7271481,7272017-7272370,
7273082-7273164,7273250-7273630,7273874-7274027
Length = 820
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = +2
Query: 53 PTEPPSRSGLRTGAYSGRSPDGRHHANDVQRLLPSVEADGD 175
P + G R A P+G A D + L+ E+DG+
Sbjct: 60 PRRSGAEQGARRAAAGSEKPEGSEEAEDEEFLVEEYESDGE 100
>10_07_0141 + 13347648-13348331
Length = 227
Score = 27.5 bits (58), Expect = 7.5
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +2
Query: 332 GYISRQFTRRYALPENCNPDTVESRLSSD-GVLTVIAPRTPAATKNERA 475
G+I+ +F RRY + ++ P+ E+ L+ D +L ++ A N RA
Sbjct: 31 GFITNKFGRRYGVGDHGTPE--EAALAHDRAILAILGAHASPAALNFRA 77
>03_02_0229 +
6594931-6595030,6595573-6595826,6595935-6596061,
6596197-6596470,6596616-6596748,6596898-6596984,
6597067-6597186
Length = 364
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +2
Query: 437 APRTPAATKNERAVPITQTGPGPEEIKEPTA 529
APR + +++ R P TQ GP + + P A
Sbjct: 13 APRAASRSRSRRPTPATQYNAGPRKPRGPNA 43
>01_06_1285 -
35995943-35996087,35996909-35997697,35997802-35997871,
35997989-35998220
Length = 411
Score = 27.5 bits (58), Expect = 7.5
Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +2
Query: 254 AEEISVKTADGYVIVEGKHEERQDEHGYISRQFTRRYALP--ENCNPDTVESRLSSDG 421
A + + +T DGY G+H +R + +R P + +P+T+E+ + +DG
Sbjct: 200 AADAATQTEDGYRSSRGRHAQRA-AAAAAQEELSREETSPPTASTSPETLEALIKADG 256
>12_02_1280 -
27517683-27517871,27517955-27518029,27518155-27518318,
27518424-27518538,27518783-27519074,27519162-27519318,
27519438-27519510,27520309-27520377,27520471-27520694,
27520800-27520981,27521067-27522064,27522335-27522580
Length = 927
Score = 27.1 bits (57), Expect = 10.0
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 430 RDRSQDSGCHEERASCSHHSNRARSGRD*GAH 525
RDRS+D ++ H ++ R RD G H
Sbjct: 321 RDRSKDRYKESDKVDSGHERDKTRDDRDRGRH 352
>12_02_0248 +
16413295-16414394,16416511-16416762,16416839-16417055,
16417216-16417353,16417493-16417669,16417744-16417851,
16417925-16418392,16418493-16418570,16418673-16418756
Length = 873
Score = 27.1 bits (57), Expect = 10.0
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = -1
Query: 482 WEQLARSSWQPESWERSRSAHRQR 411
W +L R W W+ S AHR R
Sbjct: 582 WRELIRLKWCNPEWQASSHAHRIR 605
>11_05_0004 -
18269416-18269473,18270319-18270509,18271061-18272004,
18272083-18272254,18272332-18272407,18272498-18272617,
18272795-18272959,18273048-18273138,18273673-18273757,
18273873-18274043,18274151-18274207,18274290-18274385,
18275223-18275365,18275464-18275530
Length = 811
Score = 27.1 bits (57), Expect = 10.0
Identities = 16/60 (26%), Positives = 25/60 (41%)
Frame = +2
Query: 371 PENCNPDTVESRLSSDGVLTVIAPRTPAATKNERAVPITQTGPGPEEIKEPTAEAESHET 550
PE +P +E +S V + PRT N A+P + E + E+E + T
Sbjct: 369 PERVSPWQIEPAVSPPPVNPLPVPRTKRLRPNATALPADSSAIAKEAATKVVVESEPNGT 428
>11_01_0551 + 4361640-4363386,4363443-4363687
Length = 663
Score = 27.1 bits (57), Expect = 10.0
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = -1
Query: 164 LPRTVVISG--HRWRDDGRQEIVRSKRQSEVLIAKAVRLVSQ 45
LP V I G RWRDDG + + +K +++K V Q
Sbjct: 574 LPEDVEIWGGLRRWRDDGAEMVKLTKAMCWEMVSKTSDTVDQ 615
>10_08_0374 -
17312430-17312513,17312794-17313029,17313081-17313261,
17313335-17313445,17313495-17313722,17313862-17313999,
17314159-17314375,17314452-17314564,17314919-17314921
Length = 436
Score = 27.1 bits (57), Expect = 10.0
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = -1
Query: 482 WEQLARSSWQPESWERSRSAHRQR 411
W +L R W W+ S AHR R
Sbjct: 170 WRELIRLKWCNPEWQASSHAHRIR 193
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,845,615
Number of Sequences: 37544
Number of extensions: 301749
Number of successful extensions: 1252
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1251
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1245816180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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