Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30139
(698 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY703685-1|AAU12681.1| 200|Apis mellifera abdominal-A protein. 25 0.52
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 25 0.91
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 23 2.1
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 23 2.1
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 23 2.1
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 23 2.1
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 23 2.1
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 23 2.1
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 23 2.1
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 23 2.1
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 23 2.1
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 23 2.1
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 23 2.1
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 23 2.1
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 23 2.1
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 23 2.1
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 23 2.1
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 23 2.1
U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 23 2.8
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 22 6.4
AY217747-1|AAP45005.1| 246|Apis mellifera short-chain dehydroge... 22 6.4
>AY703685-1|AAU12681.1| 200|Apis mellifera abdominal-A protein.
Length = 200
Score = 25.4 bits (53), Expect = 0.52
Identities = 14/58 (24%), Positives = 28/58 (48%)
Frame = +3
Query: 237 PCSPSSHEASSYQAIHSAPTYHVAPAGHEAPTYHAAPAAHSATTYHTAPAIHATSAIH 410
P + S + S A+ +A + H +P+ + HS ++ T+PA TS+++
Sbjct: 34 PATASLESSLSAAAVAAAAVNYAQQ--HNSPSPTGSSPQHSGSSASTSPAARTTSSMY 89
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 24.6 bits (51), Expect = 0.91
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 5/45 (11%)
Frame = +3
Query: 279 IHSAPTYHVAPAGHEAPTYHAAP---AAHSATTY--HTAPAIHAT 398
++S P H GH HA P +H+AT + H+ P H++
Sbjct: 408 VYSTPGPHHHTMGHGHSHIHATPHHHHSHAATPHHQHSTPLAHSS 452
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.4 bits (48), Expect = 2.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 457 LFTFPPHFTPPQLDMKIIC*TNMPNPKYG 543
L FPP F PP DM + PNP++G
Sbjct: 125 LTPFPPRFIPP--DMYRL--RPPPNPRFG 149
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.4 bits (48), Expect = 2.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 457 LFTFPPHFTPPQLDMKIIC*TNMPNPKYG 543
L FPP F PP DM + PNP++G
Sbjct: 125 LTPFPPRFIPP--DMYRL--RPPPNPRFG 149
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.4 bits (48), Expect = 2.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 457 LFTFPPHFTPPQLDMKIIC*TNMPNPKYG 543
L FPP F PP DM + PNP++G
Sbjct: 125 LTPFPPRFIPP--DMYRL--RPPPNPRFG 149
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.4 bits (48), Expect = 2.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 457 LFTFPPHFTPPQLDMKIIC*TNMPNPKYG 543
L FPP F PP DM + PNP++G
Sbjct: 125 LTPFPPRFIPP--DMYRL--RPPPNPRFG 149
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.4 bits (48), Expect = 2.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 457 LFTFPPHFTPPQLDMKIIC*TNMPNPKYG 543
L FPP F PP DM + PNP++G
Sbjct: 125 LTPFPPRFIPP--DMYRL--RPPPNPRFG 149
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.4 bits (48), Expect = 2.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 457 LFTFPPHFTPPQLDMKIIC*TNMPNPKYG 543
L FPP F PP DM + PNP++G
Sbjct: 125 LTPFPPRFIPP--DMYRL--RPPPNPRFG 149
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.4 bits (48), Expect = 2.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 457 LFTFPPHFTPPQLDMKIIC*TNMPNPKYG 543
L FPP F PP DM + PNP++G
Sbjct: 125 LTPFPPRFIPP--DMYRL--RPPPNPRFG 149
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.4 bits (48), Expect = 2.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 457 LFTFPPHFTPPQLDMKIIC*TNMPNPKYG 543
L FPP F PP DM + PNP++G
Sbjct: 374 LTPFPPRFIPP--DMYRL--RPPPNPRFG 398
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.4 bits (48), Expect = 2.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 457 LFTFPPHFTPPQLDMKIIC*TNMPNPKYG 543
L FPP F PP DM + PNP++G
Sbjct: 374 LTPFPPRFIPP--DMYRL--RPPPNPRFG 398
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.4 bits (48), Expect = 2.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 457 LFTFPPHFTPPQLDMKIIC*TNMPNPKYG 543
L FPP F PP DM + PNP++G
Sbjct: 374 LTPFPPRFIPP--DMYRL--RPPPNPRFG 398
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.4 bits (48), Expect = 2.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 457 LFTFPPHFTPPQLDMKIIC*TNMPNPKYG 543
L FPP F PP DM + PNP++G
Sbjct: 374 LTPFPPRFIPP--DMYRL--RPPPNPRFG 398
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.4 bits (48), Expect = 2.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 457 LFTFPPHFTPPQLDMKIIC*TNMPNPKYG 543
L FPP F PP DM + PNP++G
Sbjct: 374 LTPFPPRFIPP--DMYRL--RPPPNPRFG 398
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.4 bits (48), Expect = 2.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 457 LFTFPPHFTPPQLDMKIIC*TNMPNPKYG 543
L FPP F PP DM + PNP++G
Sbjct: 374 LTPFPPRFIPP--DMYRL--RPPPNPRFG 398
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 23.4 bits (48), Expect = 2.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 457 LFTFPPHFTPPQLDMKIIC*TNMPNPKYG 543
L FPP F PP DM + PNP++G
Sbjct: 373 LTPFPPRFIPP--DMYRL--RPPPNPRFG 397
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 23.4 bits (48), Expect = 2.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 457 LFTFPPHFTPPQLDMKIIC*TNMPNPKYG 543
L FPP F PP DM + PNP++G
Sbjct: 358 LTPFPPRFIPP--DMYRL--RPPPNPRFG 382
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 23.4 bits (48), Expect = 2.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 457 LFTFPPHFTPPQLDMKIIC*TNMPNPKYG 543
L FPP F PP DM + PNP++G
Sbjct: 374 LTPFPPRFIPP--DMYRL--RPPPNPRFG 398
>U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive
opsin protein.
Length = 377
Score = 23.0 bits (47), Expect = 2.8
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = -1
Query: 581 RPVWRVLQPSKEYPYLGLGIFVQHMIFMS 495
RP WR ++ ++GL I ++ MS
Sbjct: 43 RPHWRAFPAPGKHFHIGLAIIYSMLLIMS 71
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 21.8 bits (44), Expect = 6.4
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +2
Query: 104 CAMIKPSTTRRPFTTLPCIL 163
CAM+K + P L CIL
Sbjct: 193 CAMLKENMPEFPLYQLSCIL 212
>AY217747-1|AAP45005.1| 246|Apis mellifera short-chain
dehydrogenase/reductase protein.
Length = 246
Score = 21.8 bits (44), Expect = 6.4
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = -1
Query: 299 VGRGRVDCLVGRSLVTAGAA 240
+G+ ++CLVG+ + G A
Sbjct: 19 IGKCLIECLVGKGMKVIGIA 38
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,409
Number of Sequences: 438
Number of extensions: 4766
Number of successful extensions: 23
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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