Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30138
(709 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7281| Best HMM Match : TSP_1 (HMM E-Value=0.027) 37 0.018
SB_3059| Best HMM Match : REJ (HMM E-Value=4.8e-06) 36 0.024
SB_12148| Best HMM Match : DUF827 (HMM E-Value=0.044) 36 0.032
SB_55304| Best HMM Match : Collagen (HMM E-Value=0.11) 34 0.098
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.098
SB_6033| Best HMM Match : RNA_pol_Rpb1_R (HMM E-Value=1.6e-37) 33 0.17
SB_50061| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.69
SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0) 31 0.92
SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1) 31 0.92
SB_8527| Best HMM Match : zf-C2H2 (HMM E-Value=4.3e-21) 31 1.2
SB_45859| Best HMM Match : RVT_1 (HMM E-Value=0.0014) 30 2.1
SB_14964| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_1237| Best HMM Match : rve (HMM E-Value=0.00029) 30 2.1
SB_48264| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_28937| Best HMM Match : 7tm_1 (HMM E-Value=2.1e-08) 30 2.1
SB_27036| Best HMM Match : RVT_1 (HMM E-Value=0.00041) 30 2.1
SB_3111| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_57724| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 29 2.8
SB_44676| Best HMM Match : Bim_N (HMM E-Value=0.83) 29 2.8
SB_50451| Best HMM Match : Avirulence (HMM E-Value=0.14) 29 3.7
SB_16985| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_9846| Best HMM Match : DUF605 (HMM E-Value=0.046) 29 3.7
SB_42397| Best HMM Match : rve (HMM E-Value=0.0007) 29 4.9
SB_41214| Best HMM Match : Gag_spuma (HMM E-Value=2) 29 4.9
SB_15991| Best HMM Match : SCP (HMM E-Value=2.3e-23) 29 4.9
SB_11337| Best HMM Match : Bim_N (HMM E-Value=0.45) 29 4.9
SB_56471| Best HMM Match : RVT_1 (HMM E-Value=0.00041) 29 4.9
SB_29805| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_16236| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_13211| Best HMM Match : Extensin_2 (HMM E-Value=0.0053) 28 6.5
SB_8542| Best HMM Match : PT (HMM E-Value=4) 28 6.5
SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_800| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_31861| Best HMM Match : rve (HMM E-Value=3.6e-07) 28 6.5
SB_10209| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_48318| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_43997| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_27367| Best HMM Match : rve (HMM E-Value=9.5e-17) 28 8.5
SB_58162| Best HMM Match : Exo_endo_phos (HMM E-Value=1.2e-14) 28 8.5
SB_47441| Best HMM Match : NOT2_3_5 (HMM E-Value=0) 28 8.5
SB_46076| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_32265| Best HMM Match : Bim_N (HMM E-Value=1.5) 28 8.5
SB_12109| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_11091| Best HMM Match : Astacin (HMM E-Value=1.3e-38) 28 8.5
SB_10546| Best HMM Match : Bim_N (HMM E-Value=0.83) 28 8.5
SB_9739| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
>SB_7281| Best HMM Match : TSP_1 (HMM E-Value=0.027)
Length = 406
Score = 36.7 bits (81), Expect = 0.018
Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Frame = +3
Query: 201 SSYPHHPRSSYLPCSPSSHEASSYQAIHSAPTYHVAPAGHEAP---TYHAAPAASLCNYI 371
SSYP +SY P+S+ AS Y A S PT + P+ + AP TY AAPAA Y+
Sbjct: 69 SSYPASYPASYPASYPASYPAS-YPA--SYPTSYPYPSPYPAPYPATYSAAPAAYPAAYV 125
Query: 372 SYSSS 386
S +++
Sbjct: 126 SSATT 130
>SB_3059| Best HMM Match : REJ (HMM E-Value=4.8e-06)
Length = 2009
Score = 36.3 bits (80), Expect = 0.024
Identities = 27/97 (27%), Positives = 41/97 (42%), Gaps = 2/97 (2%)
Frame = +3
Query: 138 HSLHCPAYCSRGTGCP*NPCCSSYPHHPRSSYLPCSPSSHEASSYQAIHS--APTYHVAP 311
H+LH P SR T P C YP R+ +LP +P ++SY + V
Sbjct: 821 HALHLPHTPSRATSSPYATACRIYPIRHRALHLPHTPPCASSTSYATTRCIYLIRHRVPH 880
Query: 312 AGHEAPTYHAAPAASLCNYISYSSSNPRYFSYSPGPR 422
H P ++P A++ YI + ++P PR
Sbjct: 881 LPHTPPRSASSPYATV-RYIHPIRHRTLHLPHTP-PR 915
Score = 33.1 bits (72), Expect = 0.23
Identities = 23/90 (25%), Positives = 36/90 (40%), Gaps = 1/90 (1%)
Frame = +3
Query: 147 HCPAYCSRGTGCP*NPCCSSYPHHPRSSYLPCSPSSHEASSYQ-AIHSAPTYHVAPAGHE 323
H P SR T P C +P R+ +LP + S ++ Y A P H AP H
Sbjct: 740 HLPHTPSRATSSPYATACHIFPIRLRALHLPHTLSRAASTPYAIACRVYPIRHCAPHLHH 799
Query: 324 APTYHAAPAASLCNYISYSSSNPRYFSYSP 413
P A+ + I + + + ++P
Sbjct: 800 TPPRAASTPYATVRLIYFIRHHALHLPHTP 829
Score = 31.5 bits (68), Expect = 0.69
Identities = 19/70 (27%), Positives = 27/70 (38%)
Frame = +3
Query: 138 HSLHCPAYCSRGTGCP*NPCCSSYPHHPRSSYLPCSPSSHEASSYQAIHSAPTYHVAPAG 317
H+LH P R P C + R+ +LP +P ++ Y A + P
Sbjct: 569 HALHLPHTPPRAASTPYATACRIFTIRHRTLHLPHTPPRSASTPY-----ATELRIYPIR 623
Query: 318 HEAPTYHAAP 347
H AP H P
Sbjct: 624 HRAPHLHHTP 633
Score = 29.1 bits (62), Expect = 3.7
Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Frame = +3
Query: 129 RDAHSLHCPAYCSRGTGCP*NPCCSSYPHHPRSSYLPCSPSSHEASSY-QAIHSAP 293
R H H P S T P C YP R+ +LP +PS +S Y A H P
Sbjct: 709 RTLHLHHTP---SLATSTPYATACRIYPIRHRAPHLPHTPSRATSSPYATACHIFP 761
Score = 29.1 bits (62), Expect = 3.7
Identities = 22/77 (28%), Positives = 31/77 (40%), Gaps = 1/77 (1%)
Frame = +3
Query: 141 SLHCPAYCSRGTGCP*NPCCSSYPHHPRSSYLPCSPSSHEASSYQAIHSAPTYHVAPAGH 320
+LH P T P YP R+ +LP +P ++SY + TY + H
Sbjct: 934 TLHLPHTPPHATSTPYATALCIYPIRHRALHLPHTPPHAASTSYATVRL--TYSIR---H 988
Query: 321 EAPTY-HAAPAASLCNY 368
AP H P A+ Y
Sbjct: 989 RAPHLPHTPPRAAFTPY 1005
>SB_12148| Best HMM Match : DUF827 (HMM E-Value=0.044)
Length = 933
Score = 35.9 bits (79), Expect = 0.032
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = +3
Query: 201 SSYPHHPRSSYLPCSPSSHEASSYQAIHSAPTYHVAPAGHEAPTYHA 341
S+ PH P PC SS + + QA H + T A GH P H+
Sbjct: 884 STLPHLPHKPQTPCKQSSQQEGAGQANHRSSTPASAQYGHVEPANHS 930
>SB_55304| Best HMM Match : Collagen (HMM E-Value=0.11)
Length = 853
Score = 34.3 bits (75), Expect = 0.098
Identities = 20/61 (32%), Positives = 24/61 (39%)
Frame = +3
Query: 171 GTGCP*NPCCSSYPHHPRSSYLPCSPSSHEASSYQAIHSAPTYHVAPAGHEAPTYHAAPA 350
G P P + P P P +PS A S + S PT P G PT H+ P
Sbjct: 429 GPSDPTAPSDPTVPSDPTGPSDPTAPSDPTAPSDPTVPSDPTGQSDPTGRSDPTVHSDPT 488
Query: 351 A 353
A
Sbjct: 489 A 489
Score = 31.5 bits (68), Expect = 0.69
Identities = 17/48 (35%), Positives = 20/48 (41%)
Frame = +3
Query: 210 PHHPRSSYLPCSPSSHEASSYQAIHSAPTYHVAPAGHEAPTYHAAPAA 353
P P P +PS A S + S PT P G PT H+ P A
Sbjct: 364 PSDPTGPSDPTAPSDPTAPSDPTVPSDPTGQSDPTGPSDPTVHSDPTA 411
Score = 28.7 bits (61), Expect = 4.9
Identities = 23/82 (28%), Positives = 27/82 (32%)
Frame = +3
Query: 183 P*NPCCSSYPHHPRSSYLPCSPSSHEASSYQAIHSAPTYHVAPAGHEAPTYHAAPAASLC 362
P +P S P P P PS S + S PT P G PT + P
Sbjct: 136 PSDPTAPSDPTGPSDPTAPTGPSDPTGPSDPTVSSDPTGPSDPTGPSDPTAPSDPTGPSD 195
Query: 363 NYISYSSSNPRYFSYSPGPRLP 428
S+P S GP P
Sbjct: 196 PTAPTGPSDPTGPSDPTGPSDP 217
Score = 28.7 bits (61), Expect = 4.9
Identities = 26/88 (29%), Positives = 32/88 (36%), Gaps = 3/88 (3%)
Frame = +3
Query: 93 SEYRAP*SNHPPRDAHSLHCPAYCSRGTGCP*NPCCSSYPHHPRSSYLPCSPSSHE---A 263
S+ AP P D P S TG P +P S P P +P P+
Sbjct: 341 SDPTAPSDPTAPSDPTVPSDPTGPSDPTG-PSDPTAPSDPTAPSDPTVPSDPTGQSDPTG 399
Query: 264 SSYQAIHSAPTYHVAPAGHEAPTYHAAP 347
S +HS PT P G PT + P
Sbjct: 400 PSDPTVHSDPTAPSDPTGQSDPTGPSDP 427
Score = 28.7 bits (61), Expect = 4.9
Identities = 23/77 (29%), Positives = 29/77 (37%), Gaps = 3/77 (3%)
Frame = +3
Query: 126 PRDAHSLHCPAYCSRGTGCP*NPCCSSYPHHPRSSYLPCSPSSHE---ASSYQAIHSAPT 296
P D + P S TG P +P S P P +P P+ S +HS PT
Sbjct: 430 PSDPTAPSDPTVPSDPTG-PSDPTAPSDPTAPSDPTVPSDPTGQSDPTGRSDPTVHSDPT 488
Query: 297 YHVAPAGHEAPTYHAAP 347
P G PT + P
Sbjct: 489 APSDPTGPSDPTAPSDP 505
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 34.3 bits (75), Expect = 0.098
Identities = 21/85 (24%), Positives = 30/85 (35%)
Frame = +3
Query: 174 TGCP*NPCCSSYPHHPRSSYLPCSPSSHEASSYQAIHSAPTYHVAPAGHEAPTYHAAPAA 353
T P PC S P P + P +PS+ + S P+ + P P H+ P
Sbjct: 374 TSTPSTPCTPSTPSTPSTPSTPRTPSTPSTPCTPSTPSTPSTPITPRTPSTPCTHSTPGT 433
Query: 354 SLCNYISYSSSNPRYFSYSPGPRLP 428
+ S P S + P P
Sbjct: 434 PSTPSTPSTPSTPSTPSLTHTPSTP 458
Score = 34.3 bits (75), Expect = 0.098
Identities = 28/104 (26%), Positives = 39/104 (37%), Gaps = 2/104 (1%)
Frame = +3
Query: 48 RKPRRPPTSWPGGIVSEYRAP*SNHPPRDAHSLHCPAYCSRGT--GCP*NPCCSSYPHHP 221
R P P T G S P + P H P+ S + P P S P P
Sbjct: 420 RTPSTPCTHSTPGTPSTPSTPSTPSTPSTPSLTHTPSTPSTPSTPSTPSTPSTPSTPSTP 479
Query: 222 RSSYLPCSPSSHEASSYQAIHSAPTYHVAPAGHEAPTYHAAPAA 353
+ P +PS+ SS + S P+ AP P+ + P+A
Sbjct: 480 STPSTPSTPSTPSTSSTPSTPSTPSTPSAPGTPGTPSTPSTPSA 523
Score = 33.9 bits (74), Expect = 0.13
Identities = 16/57 (28%), Positives = 25/57 (43%)
Frame = +3
Query: 183 P*NPCCSSYPHHPRSSYLPCSPSSHEASSYQAIHSAPTYHVAPAGHEAPTYHAAPAA 353
P PC S P P + P +PS+ + S P+ + P+ P H+ P+A
Sbjct: 12 PSTPCTPSTPSTPSTPSTPRTPSTPSTPCTPSTPSTPSTPITPSTPSTPCTHSTPSA 68
Score = 33.9 bits (74), Expect = 0.13
Identities = 22/82 (26%), Positives = 32/82 (39%)
Frame = +3
Query: 183 P*NPCCSSYPHHPRSSYLPCSPSSHEASSYQAIHSAPTYHVAPAGHEAPTYHAAPAASLC 362
P PC S P P + P +PS+ A S + S P+ P+ P+ +AP+
Sbjct: 75 PSTPCTPSTPSTPSTPSTPSTPSTPSAPSTPSTPSTPSTPSTPSTPSTPSTPSAPSTPST 134
Query: 363 NYISYSSSNPRYFSYSPGPRLP 428
+ S P S P P
Sbjct: 135 PSTPSTPSTPSTPSTPSTPSTP 156
Score = 31.9 bits (69), Expect = 0.52
Identities = 20/82 (24%), Positives = 33/82 (40%)
Frame = +3
Query: 183 P*NPCCSSYPHHPRSSYLPCSPSSHEASSYQAIHSAPTYHVAPAGHEAPTYHAAPAASLC 362
P P S P P + PC+P++ S ++ S P+ P+ P+ +AP+
Sbjct: 255 PSMPSTPSTPSTPSTPSTPCTPNTPSTPSTPSMPSTPSTPSTPSTPSTPSTPSAPSTPST 314
Query: 363 NYISYSSSNPRYFSYSPGPRLP 428
+ S P+ S P P
Sbjct: 315 PSTPSTPSTPKTPSTPCTPNTP 336
Score = 31.9 bits (69), Expect = 0.52
Identities = 20/82 (24%), Positives = 33/82 (40%)
Frame = +3
Query: 183 P*NPCCSSYPHHPRSSYLPCSPSSHEASSYQAIHSAPTYHVAPAGHEAPTYHAAPAASLC 362
P P S P P + PC+P++ S ++ S P+ P+ P+ +AP+
Sbjct: 805 PSMPSTPSTPSTPSTPSTPCTPNTPSTPSTPSMPSTPSTPSTPSTPSTPSTPSAPSTPST 864
Query: 363 NYISYSSSNPRYFSYSPGPRLP 428
+ S P+ S P P
Sbjct: 865 PSTPSTPSTPKTPSTPCTPNTP 886
Score = 31.5 bits (68), Expect = 0.69
Identities = 30/130 (23%), Positives = 43/130 (33%)
Frame = +3
Query: 39 CCGRKPRRPPTSWPGGIVSEYRAP*SNHPPRDAHSLHCPAYCSRGTGCP*NPCCSSYPHH 218
C P P T S AP + P + P+ S P P S P
Sbjct: 79 CTPSTPSTPSTPSTPSTPSTPSAPSTPSTPSTPSTPSTPSTPST----PSTPSAPSTPST 134
Query: 219 PRSSYLPCSPSSHEASSYQAIHSAPTYHVAPAGHEAPTYHAAPAASLCNYISYSSSNPRY 398
P + P +PS+ S + S P+ + P P+ +AP + + S P
Sbjct: 135 PSTPSTPSTPSTPSTPSTPSTPSTPSTPITPGTPSTPSTPSAPGTPITPSTLSTPSTPST 194
Query: 399 FSYSPGPRLP 428
S P P
Sbjct: 195 PSTRSTPSTP 204
Score = 30.3 bits (65), Expect = 1.6
Identities = 21/82 (25%), Positives = 29/82 (35%)
Frame = +3
Query: 183 P*NPCCSSYPHHPRSSYLPCSPSSHEASSYQAIHSAPTYHVAPAGHEAPTYHAAPAASLC 362
P P S P P + PC+PS+ S S P+ P H P+ + P+
Sbjct: 21 PSTPSTPSTPRTPSTPSTPCTPSTPSTPSTPITPSTPS---TPCTHSTPSAPSTPSTPST 77
Query: 363 NYISYSSSNPRYFSYSPGPRLP 428
+ S P S P P
Sbjct: 78 PCTPSTPSTPSTPSTPSTPSTP 99
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/82 (24%), Positives = 29/82 (35%)
Frame = +3
Query: 183 P*NPCCSSYPHHPRSSYLPCSPSSHEASSYQAIHSAPTYHVAPAGHEAPTYHAAPAASLC 362
P PC S P P + P +PS+ S S P+ P+ P+ + P+
Sbjct: 422 PSTPCTHSTPGTPSTPSTPSTPSTPSTPSLTHTPSTPSTPSTPSTPSTPSTPSTPSTPST 481
Query: 363 NYISYSSSNPRYFSYSPGPRLP 428
+ S P S P P
Sbjct: 482 PSTPSTPSTPSTSSTPSTPSTP 503
Score = 29.9 bits (64), Expect = 2.1
Identities = 22/90 (24%), Positives = 32/90 (35%), Gaps = 3/90 (3%)
Frame = +3
Query: 168 RGTGCP*NPCCSSYPHHPRSSYLPCSPS---SHEASSYQAIHSAPTYHVAPAGHEAPTYH 338
R P PC S P P + P +PS +H S + S P+ P+ P+
Sbjct: 31 RTPSTPSTPCTPSTPSTPSTPITPSTPSTPCTHSTPSAPSTPSTPSTPCTPSTPSTPSTP 90
Query: 339 AAPAASLCNYISYSSSNPRYFSYSPGPRLP 428
+ P+ + S P S P P
Sbjct: 91 STPSTPSTPSAPSTPSTPSTPSTPSTPSTP 120
Score = 27.9 bits (59), Expect = 8.5
Identities = 21/87 (24%), Positives = 29/87 (33%)
Frame = +3
Query: 168 RGTGCP*NPCCSSYPHHPRSSYLPCSPSSHEASSYQAIHSAPTYHVAPAGHEAPTYHAAP 347
R P PC S P P + P +PS+ S S P+ P+ P+ P
Sbjct: 396 RTPSTPSTPCTPSTPSTPSTPITPRTPSTPCTHSTPGTPSTPSTPSTPSTPSTPSLTHTP 455
Query: 348 AASLCNYISYSSSNPRYFSYSPGPRLP 428
+ + S P S P P
Sbjct: 456 STPSTPSTPSTPSTPSTPSTPSTPSTP 482
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/58 (25%), Positives = 24/58 (41%)
Frame = +3
Query: 177 GCP*NPCCSSYPHHPRSSYLPCSPSSHEASSYQAIHSAPTYHVAPAGHEAPTYHAAPA 350
G P P S P P + P +PS+ S + S P+ P+ P+ + P+
Sbjct: 510 GTPGTPSTPSTPSAPGTPSTPSTPSTPSTPSTPSTPSTPSMPSTPSTPSTPSTPSTPS 567
>SB_6033| Best HMM Match : RNA_pol_Rpb1_R (HMM E-Value=1.6e-37)
Length = 1052
Score = 33.5 bits (73), Expect = 0.17
Identities = 33/104 (31%), Positives = 47/104 (45%), Gaps = 4/104 (3%)
Frame = +3
Query: 114 SNHPPRDAHSLHCPAYCSRGTGCP*NPCCSSY-PHHPRSSYLPCSPSSHEAS-SYQAIHS 287
S P ++S P+Y S +P SY P P SY P PS+ AS SY +
Sbjct: 688 SYSPTSPSYSPASPSYTSASPSY--SPASPSYSPTSP--SYSPAIPSNSPASPSYSP--A 741
Query: 288 APTYHVAPAGHE--APTYHAAPAASLCNYISYSSSNPRYFSYSP 413
+P+Y A + +P+Y A + SYS ++P Y SP
Sbjct: 742 SPSYTPASPSYTPASPSYTPASPSYTPTIPSYSPTSPSYSPTSP 785
Score = 31.1 bits (67), Expect = 0.92
Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Frame = +3
Query: 228 SYLPCSPSSHEAS-SYQAIHSAPTYHVAPAGHE--APTYHAAPAASLCNYISYSSSNPRY 398
SY P SPS AS SY ++P+Y A + +P+Y A + SYS ++P Y
Sbjct: 660 SYSPASPSYTPASPSYTP--TSPSYSPASPSYSPTSPSYSPASPSYTSASPSYSPASPSY 717
Query: 399 FSYSP--GPRLP 428
SP P +P
Sbjct: 718 SPTSPSYSPAIP 729
>SB_50061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1222
Score = 31.5 bits (68), Expect = 0.69
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = +1
Query: 268 PTKQSTLPLPTM*LQQATKLLPTMQLQLLHSATTYHTAPAIHATSA 405
P +Q LP AT+ P Q+ LH T T P HAT+A
Sbjct: 305 PQRQPQQRLPQAPTVHATQEEPIAQISSLHGETKQDTRPTTHATTA 350
>SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0)
Length = 1467
Score = 31.1 bits (67), Expect = 0.92
Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Frame = +3
Query: 189 NPCCSSY-PHHPRSSYLPCSPS-SHEASSYQAIHSAPTYHVAPAGHE--APTYHAAPAAS 356
+P Y P P S Y P SPS S + SY ++P+Y + +P+Y +
Sbjct: 434 SPTSPGYSPSSPSSGYSPASPSYSPTSPSYSP--TSPSYSPTSPSYSPTSPSYSPTSPSY 491
Query: 357 LCNYISYSSSNPRYFSYSP 413
SYS ++P Y SP
Sbjct: 492 SPTSPSYSPTSPSYSPTSP 510
>SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1)
Length = 231
Score = 31.1 bits (67), Expect = 0.92
Identities = 26/78 (33%), Positives = 33/78 (42%), Gaps = 3/78 (3%)
Frame = +3
Query: 195 CCSSYPHHPRSSYLPCSPSSHEASSYQAIHS-APTYHVAPAGHEAPTYHAAPAASLCNYI 371
C +SY P SY P +PS +SY S PT P PT P S +
Sbjct: 40 CTTSYT--PTPSYTP-TPSYTPTTSYTPTTSYTPTTSYTPTPSYTPTTSYTPTPSYTSTT 96
Query: 372 SY--SSSNPRYFSYSPGP 419
SY ++S SY+P P
Sbjct: 97 SYTPTTSYTSTTSYTPTP 114
Score = 29.5 bits (63), Expect = 2.8
Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Frame = +3
Query: 201 SSYPHHPRSSYLPCSPSSHEASSYQAIHS-APTYHVAPAGHEAPTYHAAPAASLCNYISY 377
S+ + P +SY P +PS +SY S PT P PT P S SY
Sbjct: 16 STPSYTPTTSYTP-TPSYTPTTSYTCTTSYTPTPSYTPTPSYTPTTSYTPTTSYTPTTSY 74
Query: 378 SSSNPRY---FSYSPGP 419
+ + P Y SY+P P
Sbjct: 75 TPT-PSYTPTTSYTPTP 90
Score = 28.3 bits (60), Expect = 6.5
Identities = 25/85 (29%), Positives = 34/85 (40%), Gaps = 1/85 (1%)
Frame = +3
Query: 153 PAYCSRGTGCP*NPCCSSYPHHPRSSYLPCSPSSHEASSYQAIHS-APTYHVAPAGHEAP 329
P+Y S + P S+ + P SY P +PS SY + S PT P
Sbjct: 90 PSYTSTTSYTPTTSYTSTTSYTPTPSYTP-TPSYTPTPSYTSTTSYTPTTSYTPTPSYTS 148
Query: 330 TYHAAPAASLCNYISYSSSNPRYFS 404
T S + SY+S+ P Y S
Sbjct: 149 TTSYTSTTSYTSTTSYTST-PSYTS 172
>SB_8527| Best HMM Match : zf-C2H2 (HMM E-Value=4.3e-21)
Length = 1049
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +2
Query: 569 HRATT--NLNTRPVMVMSSRVNTSLPGNLDGFIPQGHLH 679
HRATT +N+ P S + TS P N+D IP+ +H
Sbjct: 708 HRATTLPRMNSAPSSSPSMKGRTSQPKNIDDCIPKPFIH 746
>SB_45859| Best HMM Match : RVT_1 (HMM E-Value=0.0014)
Length = 471
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +1
Query: 268 PTKQSTLPLPTM*LQQATKLLPTMQLQLLHSATTYHTAPAIHATSA 405
P +Q P AT+ P Q+ LH T T P HAT+A
Sbjct: 9 PQRQPQQRSPQAPTVHATQAEPIAQISSLHGETKQDTRPTTHATTA 54
>SB_14964| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1149
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +1
Query: 268 PTKQSTLPLPTM*LQQATKLLPTMQLQLLHSATTYHTAPAIHATSA 405
P +Q P AT+ P Q+ LH T T P HAT+A
Sbjct: 275 PQRQPQQRSPQAPTVHATQAEPIAQISSLHGETKQDTRPTTHATTA 320
>SB_1237| Best HMM Match : rve (HMM E-Value=0.00029)
Length = 1026
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +1
Query: 268 PTKQSTLPLPTM*LQQATKLLPTMQLQLLHSATTYHTAPAIHATSA 405
P +Q P AT+ P Q+ LH T T P HAT+A
Sbjct: 62 PQRQPQQRSPQAPTVHATQAEPIAQISSLHGETKQDTRPTTHATTA 107
>SB_48264| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 219
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = -2
Query: 234 GRSFLDGVDSWSSMDFRGSLCHGSSMQGSVVNGRLVVDGLIMAHDILRRYRR 79
G D V + S S G+S G+ +GR DGL+++H++L YRR
Sbjct: 88 GSGSSDSVKNSKSSKTSKSPVRGNSKDGA--HGRKPDDGLLISHELLLTYRR 137
>SB_28937| Best HMM Match : 7tm_1 (HMM E-Value=2.1e-08)
Length = 1258
Score = 29.9 bits (64), Expect = 2.1
Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 3/83 (3%)
Frame = +3
Query: 63 PPTSWPGGIVSEYRAP*SNHPPR-DAHSLHCPAYCSRGTGCP*NPCC-SSYPHHPRS-SY 233
P T P + +AP + P ++H L + T P NP + P +P +
Sbjct: 157 PITQLPSTQLPSTQAPINPTPINSNSHQLQLLSTLIPSTTAPINPAAINPTPINPTPINP 216
Query: 234 LPCSPSSHEASSYQAIHSAPTYH 302
P +PSSH+ S YQ P H
Sbjct: 217 TPINPSSHQPSCYQPSSHQPNSH 239
>SB_27036| Best HMM Match : RVT_1 (HMM E-Value=0.00041)
Length = 1059
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +1
Query: 268 PTKQSTLPLPTM*LQQATKLLPTMQLQLLHSATTYHTAPAIHATSA 405
P +Q P AT+ P Q+ LH T T P HAT+A
Sbjct: 237 PQRQPQQRSPQAPTVHATQAEPIAQISSLHGETKQDTRPTTHATTA 282
>SB_3111| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 486
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Frame = +3
Query: 228 SYLPCS-PSSHEASSYQAIHSAPTYHVA---PAGHEAPTYHAAPAASLC 362
+YLPC P HE + Q + ++ P GH PT+ A +C
Sbjct: 249 TYLPCKEPGGHELPTGQRTRRSSVTYIPGKEPGGHVLPTFQAKNQVVMC 297
>SB_57724| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 3804
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -2
Query: 258 RDCWGCMVGRSFL-DGVDSWSSMDFRGSLCHGSSMQGSVVNG 136
RD W C +GR+ L V SW ++ + C S M+GS G
Sbjct: 3327 RDSWACSMGRAMLCTDVTSWPLVEV--TRCLLSKMEGSASQG 3366
>SB_44676| Best HMM Match : Bim_N (HMM E-Value=0.83)
Length = 253
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +1
Query: 268 PTKQSTLPLPTM*LQQATKLLPTMQLQLLHSATTYHTAPAIHATSA 405
P +Q P AT+ P Q+ LH T T P HAT+A
Sbjct: 182 PQRQPQQRSPQAPTVHATQAGPIAQISSLHGETKQDTRPTTHATTA 227
>SB_50451| Best HMM Match : Avirulence (HMM E-Value=0.14)
Length = 1085
Score = 29.1 bits (62), Expect = 3.7
Identities = 28/73 (38%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Frame = +2
Query: 137 PFTTLPCILLPWHR-LPLKSMLLQLST-PSKKLLP---TMQPQQSRGFFLPSNPLCPYLP 301
P T P LLP R LP + +L T P ++LLP T+QPQQ P LP
Sbjct: 969 PRTLPPQQLLPCPRTLPPQQLLPCPETIPPQQLLPCPETIQPQQLLPCPETIQPQ-QLLP 1027
Query: 302 CSSSRPRSSYLPC 340
C + P LPC
Sbjct: 1028 CPETIPPQQLLPC 1040
Score = 28.7 bits (61), Expect = 4.9
Identities = 28/82 (34%), Positives = 36/82 (43%), Gaps = 8/82 (9%)
Frame = +2
Query: 119 PSTTRRPFTTLPCILLPWHRLPLKSMLLQLSTPSK--KLLP---TMQPQQSRGFFLPSNP 283
PS TT+P ++ PL+ LL S K +LLP T++PQQ LP
Sbjct: 903 PSPGTTTTTTVPWNNNNYYYRPLEQQLLPCSGTIKPQQLLPCPGTIKPQQ----LLPCPR 958
Query: 284 LCP---YLPCSSSRPRSSYLPC 340
P LPC + P LPC
Sbjct: 959 TLPPQQLLPCPRTLPPQQLLPC 980
Score = 28.3 bits (60), Expect = 6.5
Identities = 26/79 (32%), Positives = 34/79 (43%), Gaps = 6/79 (7%)
Frame = +2
Query: 122 STTRRPFTTLPCILLPWHRLPLKSMLLQLSTPSKKLLP---TMQPQQSRGFFLPSNPLCP 292
S T +P LPC P P + + + P ++LLP T+ PQQ LP P
Sbjct: 933 SGTIKPQQLLPC---PGTIKPQQLLPCPRTLPPQQLLPCPRTLPPQQ----LLPCPRTLP 985
Query: 293 ---YLPCSSSRPRSSYLPC 340
LPC + P LPC
Sbjct: 986 PQQLLPCPETIPPQQLLPC 1004
>SB_16985| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 300
Score = 29.1 bits (62), Expect = 3.7
Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Frame = +2
Query: 164 LPWHRLPLKSMLLQLSTPSKKL-LPTMQ--PQQSRGFFLPSN--PLCPYLPCSSSRPRSS 328
LP H PL + LST S+K LP Q +SR LPS+ PL S++ R +
Sbjct: 208 LPSHVKPLYQVTQSLSTKSRKASLPITQSLSTKSRKASLPSHAKPLYQVTQSLSTKSRKA 267
Query: 329 YLPCSSS 349
LP + S
Sbjct: 268 SLPITQS 274
>SB_9846| Best HMM Match : DUF605 (HMM E-Value=0.046)
Length = 811
Score = 29.1 bits (62), Expect = 3.7
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Frame = +3
Query: 183 P*NPCCSSYPHHPRSSYLPCSPSSHEASSYQAIHSAPTYHVAPAGHEAPTYHAAPAASLC 362
P NP + P++P S+ P +PSS+ + A + P + P + P
Sbjct: 520 PNNPSSNPKPNNPSSNPKPNNPSSNPKPNNPASNPKPNNPSSNPKPNNPASNPKPNNPSS 579
Query: 363 NYISYS-SSNPRYFSYSPGPR 422
N S + SSNP+ + S PR
Sbjct: 580 NPKSNNPSSNPKPNNPSSNPR 600
Score = 28.3 bits (60), Expect = 6.5
Identities = 20/82 (24%), Positives = 34/82 (41%)
Frame = +3
Query: 183 P*NPCCSSYPHHPRSSYLPCSPSSHEASSYQAIHSAPTYHVAPAGHEAPTYHAAPAASLC 362
P NP + P++P S+ P +PSS+ S+ + + P + P+ + P
Sbjct: 556 PNNPSSNPKPNNPASNPKPNNPSSNPKSNNPSSNPKPNNPSSNPRPNNPSSNPKPNNPXX 615
Query: 363 NYISYSSSNPRYFSYSPGPRLP 428
S+ P S +P P P
Sbjct: 616 XXNPSSNPKPNNPSSNPKPNNP 637
Score = 27.9 bits (59), Expect = 8.5
Identities = 28/106 (26%), Positives = 43/106 (40%), Gaps = 1/106 (0%)
Frame = +3
Query: 108 P*SNHPPRDAHSLHCPAYCSRGTGCP*NPCCSSYPHHPRSSYLPCSPSSHEASSYQAIHS 287
P SN P + S P S P NP + P++P S+ P +PSS+ + A +
Sbjct: 442 PSSNPKPNNPSSNPKPNNPSSNPK-PNNPASNPKPNNPASNPKPNNPSSNPKPNNPASNP 500
Query: 288 APTYHVAPAGHEAPTYHAAPAASLCN-YISYSSSNPRYFSYSPGPR 422
P + P + P N + SSNP+ + S P+
Sbjct: 501 KPNNPASNPKPNNPASNPKPNNPSSNPKPNNPSSNPKPNNPSSNPK 546
>SB_42397| Best HMM Match : rve (HMM E-Value=0.0007)
Length = 729
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +1
Query: 316 ATKLLPTMQLQLLHSATTYHTAPAIHATSA 405
AT+ P Q+ LH T T P HAT+A
Sbjct: 321 ATQAEPIAQISSLHGETKQDTRPTTHATTA 350
>SB_41214| Best HMM Match : Gag_spuma (HMM E-Value=2)
Length = 454
Score = 28.7 bits (61), Expect = 4.9
Identities = 24/78 (30%), Positives = 41/78 (52%)
Frame = +2
Query: 86 YRLRISCAMIKPSTTRRPFTTLPCILLPWHRLPLKSMLLQLSTPSKKLLPTMQPQQSRGF 265
YR + A++ PS+ RP T+P + PW+R PL + + + +P + L T+ S G
Sbjct: 128 YRPMGTVALV-PSSCYRPLGTVPWVPSPWYR-PLVT-VPWVPSPGYRPLGTVPWVPSPG- 183
Query: 266 FLPSNPLCPYLPCSSSRP 319
+ P + P++P RP
Sbjct: 184 YRPLGTV-PWVPSPGYRP 200
>SB_15991| Best HMM Match : SCP (HMM E-Value=2.3e-23)
Length = 1189
Score = 28.7 bits (61), Expect = 4.9
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 7/50 (14%)
Frame = +3
Query: 123 PPRDAHSLHCPAYCSRGTGCP*N----PCCS---SYPHHPRSSYLPCSPS 251
PP+ + CP CS T C CC+ ++PHHP ++ P P+
Sbjct: 831 PPQPHTAAVCPQPCSAPTLCYHTGCHVDCCAFHPTHPHHPTTTLAPPPPA 880
>SB_11337| Best HMM Match : Bim_N (HMM E-Value=0.45)
Length = 286
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +1
Query: 316 ATKLLPTMQLQLLHSATTYHTAPAIHATSA 405
AT+ P Q+ LH T T P HAT+A
Sbjct: 52 ATQAEPIAQISSLHGETKQDTRPTTHATTA 81
>SB_56471| Best HMM Match : RVT_1 (HMM E-Value=0.00041)
Length = 1155
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +1
Query: 316 ATKLLPTMQLQLLHSATTYHTAPAIHATSA 405
AT+ P Q+ LH T T P HAT+A
Sbjct: 52 ATQAEPIAQISSLHGETKQDTRPTTHATTA 81
>SB_29805| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 400
Score = 28.7 bits (61), Expect = 4.9
Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +3
Query: 81 GGIVSEYRAP*SNHPPRDAH-SLHCPAYCSRGTGCP*NPCCSSYPHHPRSS 230
GG ++Y S P A H A+ +R G NPC SYP R+S
Sbjct: 63 GGSATKYALHTSKTLPEQASIGFHRDAFKNRKGGVEWNPCAMSYPDGFRAS 113
>SB_16236| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2317
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 219 PRSSYLPCSPSSHEASSYQAIHSAPTYHVAPAGHEAPTYHAAP 347
P ++ LP + + E SS Q +AP AP AP AAP
Sbjct: 84 PETTALPKTTGAPETSSVQETTAAPETTAAPETTAAPEATAAP 126
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 219 PRSSYLPCSPSSHEASSYQAIHSAPTYHVAPAGHEAPTYHAAP 347
P ++ LP + + E SS Q +AP AP AP AAP
Sbjct: 2016 PETTALPKTTGAPETSSVQETTAAPETTAAPETTAAPEATAAP 2058
>SB_13211| Best HMM Match : Extensin_2 (HMM E-Value=0.0053)
Length = 545
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/46 (30%), Positives = 18/46 (39%)
Frame = +3
Query: 210 PHHPRSSYLPCSPSSHEASSYQAIHSAPTYHVAPAGHEAPTYHAAP 347
PH P + P +P H A+H +P G AP H P
Sbjct: 78 PHSPPLNIGPNAPPVHIGPHVPAVHLSPRVPSLHFGTNAPLLHVRP 123
>SB_8542| Best HMM Match : PT (HMM E-Value=4)
Length = 650
Score = 28.3 bits (60), Expect = 6.5
Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Frame = +3
Query: 189 NPCCSSYPH-HPRSSYLPCSPSSHEASSYQAIHSAPTYHVAPAGHEAPTYHAAPAASLCN 365
NP YP+ +P+ Y P S + S Y ++ P P G+ P Y+ +
Sbjct: 311 NPQPRYYPYGNPQPKYYP---SGNPQSRYY-LYGNPQSRYYPYGNPQPKYYPS-GNPQSR 365
Query: 366 YISYSSSNPRYF-SYSPGPR 422
Y Y + RY+ S +P PR
Sbjct: 366 YYLYGNPQSRYYPSGNPQPR 385
>SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3297
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 219 PRSSYLPCSPSSHEASSYQAIHSAPTYHVAPAGHEAPTYHAAP 347
P ++ LP + + E SS Q +AP AP AP AAP
Sbjct: 3171 PETTALPKTTGAPETSSVQETTAAPETTAAPETTAAPEATAAP 3213
>SB_800| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 610
Score = 28.3 bits (60), Expect = 6.5
Identities = 18/82 (21%), Positives = 29/82 (35%)
Frame = +3
Query: 183 P*NPCCSSYPHHPRSSYLPCSPSSHEASSYQAIHSAPTYHVAPAGHEAPTYHAAPAASLC 362
P +P + P P +P P+ S + + PT PA PT + P
Sbjct: 431 PSDPTDPTVPSDPTDPTVPSDPTDPTVPSDPTVPAGPTVPSGPAVPTGPTVPSGPTVPSG 490
Query: 363 NYISYSSSNPRYFSYSPGPRLP 428
+ + P + GP +P
Sbjct: 491 PTVPSGPTVPSGPTVPSGPTVP 512
>SB_31861| Best HMM Match : rve (HMM E-Value=3.6e-07)
Length = 1253
Score = 28.3 bits (60), Expect = 6.5
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = +1
Query: 268 PTKQSTLPLPTM*LQQATKLLPTMQLQLLHSATTYHTAPAIHATS 402
P +Q P AT+ P Q+ LH T T P HAT+
Sbjct: 305 PQRQPQQRSPQAPTVHATQAEPIAQISSLHGETKQDTRPTTHATT 349
>SB_10209| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 798
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +1
Query: 274 KQSTLPLPTM*LQQATKLLPTMQLQLLHSATTYHTAPAIHA 396
K+S P P+ +TKL P ++L L + +HTA AI+A
Sbjct: 157 KESYAPFPS-----STKLSPYLRLGCLSARRVFHTASAINA 192
>SB_48318| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1243
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = +1
Query: 268 PTKQSTLPLPTM*LQQATKLLPTMQLQLLHSATTYHTAPAIHATSA 405
P +Q P A + P Q+ LH T T P HAT+A
Sbjct: 523 PQRQPQQRSPQAPTVHANQAEPIAQISSLHGETKQDTRPTTHATTA 568
>SB_43997| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1067
Score = 27.9 bits (59), Expect = 8.5
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +3
Query: 210 PHHPRSSYLPCSPSSHEASSYQAI-HSAPTYHVAPAGHEAPTYHAAPAASLCNYISYSSS 386
PHH Y PSS +SS+ ++ S+P +P+ ++P +S + S SSS
Sbjct: 130 PHHHPHHYPTYPPSSSPSSSFPSVPPSSPPSSSSPSSSSPSVPPSSPPSSPPS--SSSSS 187
Query: 387 NPRY 398
P Y
Sbjct: 188 LPEY 191
>SB_27367| Best HMM Match : rve (HMM E-Value=9.5e-17)
Length = 1590
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = +1
Query: 268 PTKQSTLPLPTM*LQQATKLLPTMQLQLLHSATTYHTAPAIHATSA 405
P +Q P A + P Q+ LH T T P HAT+A
Sbjct: 305 PQRQPQQRSPQAPTVHANQAEPIAQISSLHGETKQDTRPTTHATTA 350
>SB_58162| Best HMM Match : Exo_endo_phos (HMM E-Value=1.2e-14)
Length = 624
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -1
Query: 541 PYLGWAYSST*DLHVQLRRREVRWKREQLELHEQL 437
PYL W S L Q R+ E R+ +LE+H Q+
Sbjct: 549 PYLPWYDDSLKLLKRQKRKAERRYVSSRLEIHRQM 583
>SB_47441| Best HMM Match : NOT2_3_5 (HMM E-Value=0)
Length = 584
Score = 27.9 bits (59), Expect = 8.5
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = +1
Query: 244 APAVTRLLPTKQSTLPLPTM*LQQATKLLPTMQLQLLHSATTYHTAPAIHATSAIHQVPA 423
+PA+ L T + PLP L +T P M L +A+ T P S++H +PA
Sbjct: 302 SPALIGSLGTTPGSTPLPPPLLSNSTSSKPPMSLAESLAAS---TQPVSSLISSVHLMPA 358
>SB_46076| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 109
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = -2
Query: 147 VVNGRLVVDGLIMAHDILRRYRR 79
V +GR DGL+++H++L YRR
Sbjct: 5 VAHGRKPDDGLLISHELLLTYRR 27
>SB_32265| Best HMM Match : Bim_N (HMM E-Value=1.5)
Length = 235
Score = 27.9 bits (59), Expect = 8.5
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +1
Query: 274 KQSTLPLPTM*LQQATKLLPTMQLQLLHSATTYHTAPAIHATSA 405
+Q + PT+ + QA P Q+ LH T T P HAT+A
Sbjct: 67 QQRSPQAPTVHVNQAE---PIAQISSLHGETKQDTRPTTHATTA 107
>SB_12109| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4085
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +2
Query: 422 PTIQHQLFMKLQLFTFPPHFTPPQL-DMKILC*RIC 526
PTI Q+F++L+ +T P F P + + + C +C
Sbjct: 2602 PTISLQVFVRLKKYTQHPEFNPDNVGKISVACRSMC 2637
>SB_11091| Best HMM Match : Astacin (HMM E-Value=1.3e-38)
Length = 851
Score = 27.9 bits (59), Expect = 8.5
Identities = 18/52 (34%), Positives = 20/52 (38%), Gaps = 2/52 (3%)
Frame = +3
Query: 270 YQAIH-SAPTYHVAPAGHEAPTYHAAPAASLCNY-ISYSSSNPRYFSYSPGP 419
Y +IH PTYHV P P H P Y + P Y Y GP
Sbjct: 758 YPSIHVRLPTYHVVPKLVHVP--HFKPIPMPVRYEKQFGVDTPYYMPYKTGP 807
>SB_10546| Best HMM Match : Bim_N (HMM E-Value=0.83)
Length = 335
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = +1
Query: 268 PTKQSTLPLPTM*LQQATKLLPTMQLQLLHSATTYHTAPAIHATSA 405
P +Q P AT+ P Q+ LH T T P H T+A
Sbjct: 162 PQRQPQQRSPQAPTVHATQAEPIAQISSLHGETKQDTRPTTHPTTA 207
>SB_9739| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1552
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = +1
Query: 268 PTKQSTLPLPTM*LQQATKLLPTMQLQLLHSATTYHTAPAIHATSA 405
P +Q P A + P Q+ LH T T P HAT+A
Sbjct: 283 PQRQPQQRSPQAPTVHANQAEPIAQISSLHGETKQDTRPTTHATTA 328
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,894,371
Number of Sequences: 59808
Number of extensions: 539901
Number of successful extensions: 2054
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 1529
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1937
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1865706635
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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