Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30138
(709 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z96102-6|CAJ85756.1| 1062|Caenorhabditis elegans Hypothetical pr... 34 0.087
Z96102-5|CAB54262.2| 1096|Caenorhabditis elegans Hypothetical pr... 34 0.087
Z96102-4|CAB54263.1| 1192|Caenorhabditis elegans Hypothetical pr... 34 0.087
Z81027-7|CAJ85745.1| 1062|Caenorhabditis elegans Hypothetical pr... 34 0.087
Z81027-6|CAB54178.2| 1096|Caenorhabditis elegans Hypothetical pr... 34 0.087
Z81027-5|CAB54179.1| 1192|Caenorhabditis elegans Hypothetical pr... 34 0.087
U40858-1|AAA83272.1| 1096|Caenorhabditis elegans serine/threonin... 34 0.087
U22183-1|AAA97437.1| 1192|Caenorhabditis elegans serine/threonin... 34 0.087
U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resist... 33 0.15
M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.ele... 33 0.15
AC024790-3|AAF60637.1| 446|Caenorhabditis elegans Hypothetical ... 33 0.15
Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical pr... 33 0.20
Z27078-2|CAA81588.3| 788|Caenorhabditis elegans Hypothetical pr... 33 0.20
Z27078-1|CAA81587.2| 628|Caenorhabditis elegans Hypothetical pr... 33 0.20
AC024790-10|AAF60632.2| 129|Caenorhabditis elegans Hypothetical... 30 1.4
AL021472-6|CAK55193.1| 290|Caenorhabditis elegans Hypothetical ... 30 1.9
AF083226-1|AAD03684.1| 560|Caenorhabditis elegans nuclear recep... 30 1.9
AF036702-12|AAP31437.1| 559|Caenorhabditis elegans Nuclear horm... 30 1.9
AF036702-11|AAP31436.1| 560|Caenorhabditis elegans Nuclear horm... 30 1.9
Z81049-1|CAB61001.2| 503|Caenorhabditis elegans Hypothetical pr... 29 2.5
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 29 2.5
L29052-1|AAA27982.2| 503|Caenorhabditis elegans cell death prot... 29 2.5
AF210702-1|AAG42045.1| 503|Caenorhabditis elegans caspase CED-3... 29 2.5
EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of g... 29 3.3
AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical ... 29 3.3
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ... 29 3.3
Z81143-1|CAB03513.1| 381|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z81130-2|CAB03417.1| 463|Caenorhabditis elegans Hypothetical pr... 29 4.3
U55376-1|AAA98003.1| 434|Caenorhabditis elegans Hypothetical pr... 29 4.3
U20535-1|AAC46632.1| 463|Caenorhabditis elegans gld-1 protein. 29 4.3
AF125969-1|AAD14762.2| 1484|Caenorhabditis elegans Hypothetical ... 29 4.3
Z80220-2|CAD27608.1| 3185|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z80220-1|CAB02304.1| 3212|Caenorhabditis elegans Hypothetical pr... 28 5.7
U29377-10|AAA68717.1| 140|Caenorhabditis elegans Hypothetical p... 28 5.7
AF067222-1|AAC17017.2| 1464|Caenorhabditis elegans Hypothetical ... 28 5.7
U58749-5|AAU05597.1| 1551|Caenorhabditis elegans Hypothetical pr... 28 7.5
U58749-4|AAU05598.1| 1592|Caenorhabditis elegans Hypothetical pr... 28 7.5
>Z96102-6|CAJ85756.1| 1062|Caenorhabditis elegans Hypothetical
protein H39E23.1c protein.
Length = 1062
Score = 34.3 bits (75), Expect = 0.087
Identities = 21/71 (29%), Positives = 35/71 (49%)
Frame = +3
Query: 174 TGCP*NPCCSSYPHHPRSSYLPCSPSSHEASSYQAIHSAPTYHVAPAGHEAPTYHAAPAA 353
+G P + SS +HP++ S S++ +Q H+A ++ V P+ ++ PT A
Sbjct: 773 SGAPSSTGASSQQYHPKAPSSSSSSSTNPPHQHQLTHNA-SFSVTPSSYQIPTSTAVNVT 831
Query: 354 SLCNYISYSSS 386
S S SSS
Sbjct: 832 STGMPTSSSSS 842
>Z96102-5|CAB54262.2| 1096|Caenorhabditis elegans Hypothetical protein
H39E23.1b protein.
Length = 1096
Score = 34.3 bits (75), Expect = 0.087
Identities = 21/71 (29%), Positives = 35/71 (49%)
Frame = +3
Query: 174 TGCP*NPCCSSYPHHPRSSYLPCSPSSHEASSYQAIHSAPTYHVAPAGHEAPTYHAAPAA 353
+G P + SS +HP++ S S++ +Q H+A ++ V P+ ++ PT A
Sbjct: 807 SGAPSSTGASSQQYHPKAPSSSSSSSTNPPHQHQLTHNA-SFSVTPSSYQIPTSTAVNVT 865
Query: 354 SLCNYISYSSS 386
S S SSS
Sbjct: 866 STGMPTSSSSS 876
>Z96102-4|CAB54263.1| 1192|Caenorhabditis elegans Hypothetical protein
H39E23.1a protein.
Length = 1192
Score = 34.3 bits (75), Expect = 0.087
Identities = 21/71 (29%), Positives = 35/71 (49%)
Frame = +3
Query: 174 TGCP*NPCCSSYPHHPRSSYLPCSPSSHEASSYQAIHSAPTYHVAPAGHEAPTYHAAPAA 353
+G P + SS +HP++ S S++ +Q H+A ++ V P+ ++ PT A
Sbjct: 903 SGAPSSTGASSQQYHPKAPSSSSSSSTNPPHQHQLTHNA-SFSVTPSSYQIPTSTAVNVT 961
Query: 354 SLCNYISYSSS 386
S S SSS
Sbjct: 962 STGMPTSSSSS 972
>Z81027-7|CAJ85745.1| 1062|Caenorhabditis elegans Hypothetical
protein H39E23.1c protein.
Length = 1062
Score = 34.3 bits (75), Expect = 0.087
Identities = 21/71 (29%), Positives = 35/71 (49%)
Frame = +3
Query: 174 TGCP*NPCCSSYPHHPRSSYLPCSPSSHEASSYQAIHSAPTYHVAPAGHEAPTYHAAPAA 353
+G P + SS +HP++ S S++ +Q H+A ++ V P+ ++ PT A
Sbjct: 773 SGAPSSTGASSQQYHPKAPSSSSSSSTNPPHQHQLTHNA-SFSVTPSSYQIPTSTAVNVT 831
Query: 354 SLCNYISYSSS 386
S S SSS
Sbjct: 832 STGMPTSSSSS 842
>Z81027-6|CAB54178.2| 1096|Caenorhabditis elegans Hypothetical protein
H39E23.1b protein.
Length = 1096
Score = 34.3 bits (75), Expect = 0.087
Identities = 21/71 (29%), Positives = 35/71 (49%)
Frame = +3
Query: 174 TGCP*NPCCSSYPHHPRSSYLPCSPSSHEASSYQAIHSAPTYHVAPAGHEAPTYHAAPAA 353
+G P + SS +HP++ S S++ +Q H+A ++ V P+ ++ PT A
Sbjct: 807 SGAPSSTGASSQQYHPKAPSSSSSSSTNPPHQHQLTHNA-SFSVTPSSYQIPTSTAVNVT 865
Query: 354 SLCNYISYSSS 386
S S SSS
Sbjct: 866 STGMPTSSSSS 876
>Z81027-5|CAB54179.1| 1192|Caenorhabditis elegans Hypothetical protein
H39E23.1a protein.
Length = 1192
Score = 34.3 bits (75), Expect = 0.087
Identities = 21/71 (29%), Positives = 35/71 (49%)
Frame = +3
Query: 174 TGCP*NPCCSSYPHHPRSSYLPCSPSSHEASSYQAIHSAPTYHVAPAGHEAPTYHAAPAA 353
+G P + SS +HP++ S S++ +Q H+A ++ V P+ ++ PT A
Sbjct: 903 SGAPSSTGASSQQYHPKAPSSSSSSSTNPPHQHQLTHNA-SFSVTPSSYQIPTSTAVNVT 961
Query: 354 SLCNYISYSSS 386
S S SSS
Sbjct: 962 STGMPTSSSSS 972
>U40858-1|AAA83272.1| 1096|Caenorhabditis elegans serine/threonine
kinase protein.
Length = 1096
Score = 34.3 bits (75), Expect = 0.087
Identities = 21/71 (29%), Positives = 35/71 (49%)
Frame = +3
Query: 174 TGCP*NPCCSSYPHHPRSSYLPCSPSSHEASSYQAIHSAPTYHVAPAGHEAPTYHAAPAA 353
+G P + SS +HP++ S S++ +Q H+A ++ V P+ ++ PT A
Sbjct: 807 SGAPSSTGASSQQYHPKAPSSSSSSSTNPPHQHQLTHNA-SFSVTPSSYQIPTSTAVNVT 865
Query: 354 SLCNYISYSSS 386
S S SSS
Sbjct: 866 STGMPTSSSSS 876
>U22183-1|AAA97437.1| 1192|Caenorhabditis elegans serine/threonine
kinase protein.
Length = 1192
Score = 34.3 bits (75), Expect = 0.087
Identities = 21/71 (29%), Positives = 35/71 (49%)
Frame = +3
Query: 174 TGCP*NPCCSSYPHHPRSSYLPCSPSSHEASSYQAIHSAPTYHVAPAGHEAPTYHAAPAA 353
+G P + SS +HP++ S S++ +Q H+A ++ V P+ ++ PT A
Sbjct: 903 SGAPSSTGASSQQYHPKAPSSSSSSSTNPPHQHQLTHNA-SFSVTPSSYQIPTSTAVNVT 961
Query: 354 SLCNYISYSSS 386
S S SSS
Sbjct: 962 STGMPTSSSSS 972
>U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resistant
protein 1 protein.
Length = 1852
Score = 33.5 bits (73), Expect = 0.15
Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
Frame = +3
Query: 153 PAYCSRGTGCP*NPCCSSY-PHHPRSSYLPCSPS-SHEASSYQAIHSAPTYHVAPAGHE- 323
P+Y +P SY P P SY P SPS S + SY ++P+Y +
Sbjct: 1594 PSYSPTSPAAGQSPVSPSYSPTSP--SYSPTSPSYSPTSPSYSP--TSPSYSPTSPSYSP 1649
Query: 324 -APTYHAAPAASLCNYISYSSSNPRYFSYSP 413
+P+Y + + + SYS S+PRY SP
Sbjct: 1650 TSPSYSPSSPSYSPSSPSYSPSSPRYSPTSP 1680
Score = 27.5 bits (58), Expect = 9.9
Identities = 37/128 (28%), Positives = 51/128 (39%), Gaps = 5/128 (3%)
Frame = +3
Query: 45 GRKPRRPPTSWPGGIVSEYRAP*SNHPPRDAHSLHCPAYC-SRGTGCP*NPCCSSYPHHP 221
G P P S P +P S P +S P Y S T P +P + P P
Sbjct: 1715 GYSPSSPKYS-PSSPTYSPTSP-SYSPTSPQYSPTSPQYSPSSPTYTPSSPTYN--PTSP 1770
Query: 222 RS----SYLPCSPSSHEASSYQAIHSAPTYHVAPAGHEAPTYHAAPAASLCNYISYSSSN 389
R Y P SP+ + +S S+P Y +P +PTY +P+ YS ++
Sbjct: 1771 RGFSSPQYSPTSPT-YSPTSPSYTPSSPQY--SPT---SPTYTPSPSEQPGTSAQYSPTS 1824
Query: 390 PRYFSYSP 413
P Y SP
Sbjct: 1825 PTYSPSSP 1832
>M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.elegans
RNA polymeraseII largest subunit (ama-1 IV) gene,
complete cds. ).
Length = 1859
Score = 33.5 bits (73), Expect = 0.15
Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
Frame = +3
Query: 153 PAYCSRGTGCP*NPCCSSY-PHHPRSSYLPCSPS-SHEASSYQAIHSAPTYHVAPAGHE- 323
P+Y +P SY P P SY P SPS S + SY ++P+Y +
Sbjct: 1601 PSYSPTSPAAGQSPVSPSYSPTSP--SYSPTSPSYSPTSPSYSP--TSPSYSPTSPSYSP 1656
Query: 324 -APTYHAAPAASLCNYISYSSSNPRYFSYSP 413
+P+Y + + + SYS S+PRY SP
Sbjct: 1657 TSPSYSPSSPSYSPSSPSYSPSSPRYSPTSP 1687
Score = 27.5 bits (58), Expect = 9.9
Identities = 37/128 (28%), Positives = 51/128 (39%), Gaps = 5/128 (3%)
Frame = +3
Query: 45 GRKPRRPPTSWPGGIVSEYRAP*SNHPPRDAHSLHCPAYC-SRGTGCP*NPCCSSYPHHP 221
G P P S P +P S P +S P Y S T P +P + P P
Sbjct: 1722 GYSPSSPKYS-PSSPTYSPTSP-SYSPTSPQYSPTSPQYSPSSPTYTPSSPTYN--PTSP 1777
Query: 222 RS----SYLPCSPSSHEASSYQAIHSAPTYHVAPAGHEAPTYHAAPAASLCNYISYSSSN 389
R Y P SP+ + +S S+P Y +P +PTY +P+ YS ++
Sbjct: 1778 RGFSSPQYSPTSPT-YSPTSPSYTPSSPQY--SPT---SPTYTPSPSEQPGTSAQYSPTS 1831
Query: 390 PRYFSYSP 413
P Y SP
Sbjct: 1832 PTYSPSSP 1839
>AC024790-3|AAF60637.1| 446|Caenorhabditis elegans Hypothetical
protein Y47D7A.6 protein.
Length = 446
Score = 33.5 bits (73), Expect = 0.15
Identities = 27/108 (25%), Positives = 44/108 (40%), Gaps = 11/108 (10%)
Frame = +3
Query: 63 PPTSWPGG----IVSEYRAP*SNHPPRDAHSLHCPAYCSRGTGCP*NPCCSSYPHHPRSS 230
PP S+P + Y+ P +++ + A+S P Y + P + P +P S
Sbjct: 232 PPPSYPTAKKYPVAPTYQMPPNDYAQKPAYSTAPPTYPTEAPTYPTTASYETTPSYPEPS 291
Query: 231 Y-----LPCSPSSHEASSYQAIHS-APTYHVAPAGHE-APTYHAAPAA 353
Y P +P+ SY+ S H A + APTY P++
Sbjct: 292 YQVSKKYPIAPTYETTPSYETTPSYLVQSHAASKKYPIAPTYETTPSS 339
>Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical protein
K04H4.2c protein.
Length = 1446
Score = 33.1 bits (72), Expect = 0.20
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = +3
Query: 159 YCSRGTGCP*NPCCSSYPHHPRSSYLPCSPSSHEA 263
YC+ G C N CC SY PR S C PS A
Sbjct: 903 YCATGYSCIQNQCCPSYNSAPRISVYTC-PSGGNA 936
>Z27078-2|CAA81588.3| 788|Caenorhabditis elegans Hypothetical
protein K04H4.2b protein.
Length = 788
Score = 33.1 bits (72), Expect = 0.20
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = +3
Query: 159 YCSRGTGCP*NPCCSSYPHHPRSSYLPCSPSSHEA 263
YC+ G C N CC SY PR S C PS A
Sbjct: 245 YCATGYSCIQNQCCPSYNSAPRISVYTC-PSGGNA 278
>Z27078-1|CAA81587.2| 628|Caenorhabditis elegans Hypothetical
protein K04H4.2a protein.
Length = 628
Score = 33.1 bits (72), Expect = 0.20
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = +3
Query: 159 YCSRGTGCP*NPCCSSYPHHPRSSYLPCSPSSHEA 263
YC+ G C N CC SY PR S C PS A
Sbjct: 245 YCATGYSCIQNQCCPSYNSAPRISVYTC-PSGGNA 278
>AC024790-10|AAF60632.2| 129|Caenorhabditis elegans Hypothetical
protein Y47D7A.11 protein.
Length = 129
Score = 30.3 bits (65), Expect = 1.4
Identities = 23/63 (36%), Positives = 30/63 (47%)
Frame = +3
Query: 201 SSYPHHPRSSYLPCSPSSHEASSYQAIHSAPTYHVAPAGHEAPTYHAAPAASLCNYISYS 380
+SYP P SY P P S+ + APTY PA + P+Y A P + Y S S
Sbjct: 24 NSYPTTP--SY-PTPPPSYPTPKKYPV--APTYPSPPAYAQKPSYSAPPPPAPSVYSSSS 78
Query: 381 SSN 389
S+
Sbjct: 79 FSD 81
>AL021472-6|CAK55193.1| 290|Caenorhabditis elegans Hypothetical
protein Y17D7B.8 protein.
Length = 290
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +2
Query: 209 STPSKKLLPTMQP-QQSRGFFLPSNPLCPYLPCSSSR 316
S K L T P Q +GF++ CP +PCSS R
Sbjct: 188 SVEESKFLQTKVPGPQPKGFWIGGGRNCPTVPCSSFR 224
>AF083226-1|AAD03684.1| 560|Caenorhabditis elegans nuclear receptor
NHR-8 protein.
Length = 560
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 4/33 (12%)
Frame = +3
Query: 228 SYLPCSPSSHEASSY---QAIHSAPT-YHVAPA 314
S + C+PSSH++S Y Q + +PT Y V+PA
Sbjct: 218 SVISCAPSSHDSSGYNTSQLVTQSPTNYTVSPA 250
>AF036702-12|AAP31437.1| 559|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 8, isoform b protein.
Length = 559
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 4/33 (12%)
Frame = +3
Query: 228 SYLPCSPSSHEASSY---QAIHSAPT-YHVAPA 314
S + C+PSSH++S Y Q + +PT Y V+PA
Sbjct: 217 SVISCAPSSHDSSGYNTSQLVTQSPTNYTVSPA 249
>AF036702-11|AAP31436.1| 560|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 8, isoform a protein.
Length = 560
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 4/33 (12%)
Frame = +3
Query: 228 SYLPCSPSSHEASSY---QAIHSAPT-YHVAPA 314
S + C+PSSH++S Y Q + +PT Y V+PA
Sbjct: 218 SVISCAPSSHDSSGYNTSQLVTQSPTNYTVSPA 250
>Z81049-1|CAB61001.2| 503|Caenorhabditis elegans Hypothetical
protein C48D1.2 protein.
Length = 503
Score = 29.5 bits (63), Expect = 2.5
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Frame = +3
Query: 225 SSYLPCSPSSHEASSYQAIHSAPTYHVA-PAGHEAPTYHAAPAASL--CNYISYSSSNPR 395
+SY + S +A+HS+ ++ + P + P+ ++ +S C+ + YSSS R
Sbjct: 140 TSYQDIYSRARSRSRSRALHSSDRHNYSSPPVNAFPSQPSSANSSFTGCSSLGYSSSRNR 199
Query: 396 YFSYSPGP 419
FS + GP
Sbjct: 200 SFSKASGP 207
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 29.5 bits (63), Expect = 2.5
Identities = 33/134 (24%), Positives = 45/134 (33%), Gaps = 9/134 (6%)
Frame = +3
Query: 54 PRRPPTSWPGGIVSEYRAP*SNHPPRDAHSLHCPA-----YCSRGTGCP*NPCCSSYPHH 218
P PP +P V P + +P H++ PA Y P P + YP H
Sbjct: 50 PPPPPAPYPQQAVPAPAPPPAPYPQ---HAVPAPAPPLASYPQNAVPVP-APPPAPYPQH 105
Query: 219 --PRSSYLPCSPSSHEASSYQAIHSAPTYHVAPAGHEAPTYH--AAPAASLCNYISYSSS 386
P + P H + P P + P H P A YI +S+
Sbjct: 106 AVPAPAPPPAPYPQHAVPAPAPYQQQPPPPPPPPHYPPPPPHYPPPPPAPHSAYIDHSAP 165
Query: 387 NPRYFSYSPGPRLP 428
P Y +S P P
Sbjct: 166 RPAYIEHSAPPPQP 179
>L29052-1|AAA27982.2| 503|Caenorhabditis elegans cell death protein
protein.
Length = 503
Score = 29.5 bits (63), Expect = 2.5
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Frame = +3
Query: 225 SSYLPCSPSSHEASSYQAIHSAPTYHVA-PAGHEAPTYHAAPAASL--CNYISYSSSNPR 395
+SY + S +A+HS+ ++ + P + P+ ++ +S C+ + YSSS R
Sbjct: 140 TSYQDIYSRARSRSRSRALHSSDRHNYSSPPVNAFPSQPSSANSSFTGCSSLGYSSSRNR 199
Query: 396 YFSYSPGP 419
FS + GP
Sbjct: 200 SFSKASGP 207
>AF210702-1|AAG42045.1| 503|Caenorhabditis elegans caspase CED-3
protein.
Length = 503
Score = 29.5 bits (63), Expect = 2.5
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Frame = +3
Query: 225 SSYLPCSPSSHEASSYQAIHSAPTYHVA-PAGHEAPTYHAAPAASL--CNYISYSSSNPR 395
+SY + S +A+HS+ ++ + P + P+ ++ +S C+ + YSSS R
Sbjct: 140 TSYQDIYSRARSRSRSRALHSSDRHNYSSPPVNAFPSQPSSANSSFTGCSSLGYSSSRNR 199
Query: 396 YFSYSPGP 419
FS + GP
Sbjct: 200 SFSKASGP 207
>EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of glp-1
protein.
Length = 1492
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = -1
Query: 184 GQPVPREQY-AGQCSEWASRGGWFDHGARYSETIPPGHDVGGLRGLRPQQR 35
G P P+ + A +++ ++G + GARY PG + G G PQ +
Sbjct: 1146 GAPTPQGPFGAAPGAQFGAQGPYGQQGARYEAQKSPGAAIFGAPGAPPQHQ 1196
>AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical
protein Y53H1C.2a protein.
Length = 1512
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = -1
Query: 184 GQPVPREQY-AGQCSEWASRGGWFDHGARYSETIPPGHDVGGLRGLRPQQR 35
G P P+ + A +++ ++G + GARY PG + G G PQ +
Sbjct: 1166 GAPTPQGPFGAAPGAQFGAQGPYGQQGARYEAQKSPGAAIFGAPGAPPQHQ 1216
>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
protein Y8A9A.2 protein.
Length = 1360
Score = 29.1 bits (62), Expect = 3.3
Identities = 23/69 (33%), Positives = 28/69 (40%)
Frame = +2
Query: 119 PSTTRRPFTTLPCILLPWHRLPLKSMLLQLSTPSKKLLPTMQPQQSRGFFLPSNPLCPYL 298
P R LP ILL R L +LLQ S P +L P R PS P P +
Sbjct: 318 PQNQLRSLPALPLILLQPSRQALPLILLQPSLPQNQL--RSLPAHPRILPRPSLPALPLI 375
Query: 299 PCSSSRPRS 325
S P++
Sbjct: 376 LLQPSLPQN 384
>Z81143-1|CAB03513.1| 381|Caenorhabditis elegans Hypothetical
protein ZK265.2 protein.
Length = 381
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +3
Query: 225 SSYLPCSPSSHEASSYQAIHSAPTYHVAPAGHEAPTYHA-APAA 353
++Y PC P S E ++ + S P + APA Y + APAA
Sbjct: 280 AAYCPCPPRSAEMAATGSSDSQPASYEAPAPAATKGYDSPAPAA 323
>Z81130-2|CAB03417.1| 463|Caenorhabditis elegans Hypothetical
protein T23G11.3 protein.
Length = 463
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = +2
Query: 182 PLKSMLLQLSTPSKKLLPTMQPQQSRGFFLPSNPLCPYLPCSSSRPRSSYLPCSS 346
P+ S Q TP+ L P M +SR F P+ P P SS +S + P ++
Sbjct: 86 PISSAYSQ--TPNSLLSPAMFNPKSRSIFSPTLPATPMSYGKSSMDKSLFSPTAT 138
>U55376-1|AAA98003.1| 434|Caenorhabditis elegans Hypothetical
protein F16H11.3 protein.
Length = 434
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -2
Query: 219 DGVDSWSSMDFRGSLCHGSSMQGSVVN 139
DGV++W S +F GSL S + + +N
Sbjct: 59 DGVETWYSKEFMGSLTIASQLPNASIN 85
>U20535-1|AAC46632.1| 463|Caenorhabditis elegans gld-1 protein.
Length = 463
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = +2
Query: 182 PLKSMLLQLSTPSKKLLPTMQPQQSRGFFLPSNPLCPYLPCSSSRPRSSYLPCSS 346
P+ S Q TP+ L P M +SR F P+ P P SS +S + P ++
Sbjct: 86 PISSAYSQ--TPNSLLSPAMFNPKSRSIFSPTLPATPMSYGKSSMDKSLFSPTAT 138
>AF125969-1|AAD14762.2| 1484|Caenorhabditis elegans Hypothetical
protein Y38C9A.1 protein.
Length = 1484
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/46 (41%), Positives = 24/46 (52%)
Frame = +3
Query: 219 PRSSYLPCSPSSHEASSYQAIHSAPTYHVAPAGHEAPTYHAAPAAS 356
P SS S S +A S + +AP VAPA APT H +P +S
Sbjct: 1071 PSSSIPNTSTSIPKAPSAPVLSAAPPKIVAPAAPAAPT-HYSPISS 1115
>Z80220-2|CAD27608.1| 3185|Caenorhabditis elegans Hypothetical
protein T08G11.1b protein.
Length = 3185
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -1
Query: 529 WAYSST*DLHVQLRRREVRWKREQLELHEQLV 434
W ++ T L ++RRR W ++++ H QLV
Sbjct: 333 WKFAYTSILEEKVRRRRNNWSWDRMQKHRQLV 364
>Z80220-1|CAB02304.1| 3212|Caenorhabditis elegans Hypothetical
protein T08G11.1a protein.
Length = 3212
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -1
Query: 529 WAYSST*DLHVQLRRREVRWKREQLELHEQLV 434
W ++ T L ++RRR W ++++ H QLV
Sbjct: 333 WKFAYTSILEEKVRRRRNNWSWDRMQKHRQLV 364
>U29377-10|AAA68717.1| 140|Caenorhabditis elegans Hypothetical
protein K05F1.10 protein.
Length = 140
Score = 28.3 bits (60), Expect = 5.7
Identities = 9/19 (47%), Positives = 16/19 (84%)
Frame = +1
Query: 19 KIVLICAVVAVSHAGLLHH 75
+++L+CA++AV+ A L HH
Sbjct: 2 RLLLLCALIAVASASLFHH 20
>AF067222-1|AAC17017.2| 1464|Caenorhabditis elegans Hypothetical
protein H11E01.3 protein.
Length = 1464
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/45 (28%), Positives = 19/45 (42%)
Frame = +3
Query: 132 DAHSLHCPAYCSRGTGCP*NPCCSSYPHHPRSSYLPCSPSSHEAS 266
+ HS H + P SS+ HH RSS + P++ S
Sbjct: 637 EVHSFHASEHIDEALPSPVQSVHSSHDHHDRSSPVASEPAARSPS 681
>U58749-5|AAU05597.1| 1551|Caenorhabditis elegans Hypothetical
protein B0496.3a protein.
Length = 1551
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Frame = +3
Query: 192 PCCSSYPH--HPRSSYLPCSPSSHEASSYQ 275
P CS Y + HP S PCSP+ E ++
Sbjct: 47 PTCSKYIYGTHPMSGAEPCSPTKKEKHRFE 76
>U58749-4|AAU05598.1| 1592|Caenorhabditis elegans Hypothetical
protein B0496.3b protein.
Length = 1592
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Frame = +3
Query: 192 PCCSSYPH--HPRSSYLPCSPSSHEASSYQ 275
P CS Y + HP S PCSP+ E ++
Sbjct: 47 PTCSKYIYGTHPMSGAEPCSPTKKEKHRFE 76
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,026,975
Number of Sequences: 27780
Number of extensions: 376876
Number of successful extensions: 1226
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1091
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1217
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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