BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS30138 (709 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 26 0.30 EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 22 6.6 DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 22 6.6 AY217747-1|AAP45005.1| 246|Apis mellifera short-chain dehydroge... 22 6.6 AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 21 8.7 >AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. Length = 996 Score = 26.2 bits (55), Expect = 0.30 Identities = 12/24 (50%), Positives = 13/24 (54%) Frame = -2 Query: 666 CGMNPSRLPGREVFTLDDITITGL 595 C M +P EVF ITITGL Sbjct: 359 CSMGVKYIPNTEVFNDTKITITGL 382 >EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. Length = 686 Score = 21.8 bits (44), Expect = 6.6 Identities = 8/18 (44%), Positives = 11/18 (61%) Frame = +3 Query: 510 YVDEYAHPKYGYSYSVED 563 Y+ EY P+Y Y +ED Sbjct: 210 YMREYNDPEYKLDYFMED 227 >DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor protein. Length = 459 Score = 21.8 bits (44), Expect = 6.6 Identities = 9/20 (45%), Positives = 11/20 (55%) Frame = +2 Query: 104 CAMIKPSTTRRPFTTLPCIL 163 CAM+K + P L CIL Sbjct: 193 CAMLKENMPEFPLYQLSCIL 212 >AY217747-1|AAP45005.1| 246|Apis mellifera short-chain dehydrogenase/reductase protein. Length = 246 Score = 21.8 bits (44), Expect = 6.6 Identities = 7/20 (35%), Positives = 13/20 (65%) Frame = -3 Query: 299 VGRGRVDCLVGRSLVTAGAA 240 +G+ ++CLVG+ + G A Sbjct: 19 IGKCLIECLVGKGMKVIGIA 38 >AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein protein. Length = 1308 Score = 21.4 bits (43), Expect = 8.7 Identities = 11/32 (34%), Positives = 17/32 (53%) Frame = +2 Query: 563 PSHRATTNLNTRPVMVMSSRVNTSLPGNLDGF 658 P+ +AT N+ +PV V+ S + L N F Sbjct: 888 PAKKAT-NIGGKPVAVVKSSAQSLLQSNQQHF 918 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 208,386 Number of Sequences: 438 Number of extensions: 4969 Number of successful extensions: 22 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 22 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 22 length of database: 146,343 effective HSP length: 56 effective length of database: 121,815 effective search space used: 21804885 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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